Last Posted: Sep 10, 2024
- Evaluating metagenomics and targeted approaches for diagnosis and surveillance of viruses.
Sarah Buddle et al. Genome Med 2024 9 (1) 111 - Time-series sewage metagenomics distinguishes seasonal, human-derived and environmental microbial communities potentially allowing source-attributed surveillance.
Ágnes Becsei et al. Nat Commun 2024 8 (1) 7551 - Prediction of A. Baumannii Amikacin Resistance in Clinical Metagenomics.
Michael Aaron Sy et al. Stud Health Technol Inform 2024 8 212-213 - Integrative genome-centric metagenomics for surface water surveillance: Elucidating microbiomes, antimicrobial resistance, and their associations.
Xinyang Huang et al. Water Res 2024 8 122208 - Towards facilitated interpretation of shotgun metagenomics long-read sequencing data analyzed with KMA for the detection of bacterial pathogens and their antimicrobial resistance genes.
Mathieu Gand et al. Front Microbiol 2024 4 1336532 - Comparison of Three Viral Nucleic Acid Preamplification Pipelines for Sewage Viral Metagenomics.
Xavier Fernandez-Cassi et al. Food Environ Virol 2024 4 - Deep learning methods in metagenomics: a review.
Gaspar Roy et al. Microb Genom 2024 4 (4) - OCTOPUS: Disk-based, Multiplatform, Mobile-friendly Metagenomics Classifier.
Simone Marini et al. bioRxiv 2024 4 - Strain-level characterization of foodborne pathogens without culture enrichment for outbreak investigation using shotgun metagenomics facilitated with nanopore adaptive sampling.
Florence E Buytaers et al. Front Microbiol 2024 3 1330814 - Targeted metagenomics reveals association between severity and pathogen co-detection in infants with respiratory syncytial virus.
Gu-Lung Lin et al. Nat Commun 2024 3 (1) 2379
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Disclaimer: Articles listed in the Public Health Genomics and Precision Health Knowledge Base are selected by the CDC Office of Public Health Genomics to provide current awareness of the literature and news. Inclusion in the update does not necessarily represent the views of the Centers for Disease Control and Prevention nor does it imply endorsement of the article's methods or findings. CDC and DHHS assume no responsibility for the factual accuracy of the items presented. The selection, omission, or content of items does not imply any endorsement or other position taken by CDC or DHHS. Opinion, findings and conclusions expressed by the original authors of items included in the update, or persons quoted therein, are strictly their own and are in no way meant to represent the opinion or views of CDC or DHHS. References to publications, news sources, and non-CDC Websites are provided solely for informational purposes and do not imply endorsement by CDC or DHHS.