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Advanced Molecular Detection Clips Database|Home|PHGKB

AMD Clips Database

Last data update: Sep 20, 2018. (Total: 9752 Documents since 2015)
      CDC Author Only

This Week's New Publications

Revamped US biodefence strategy adds natural disasters and lab accidents
Reardon S. Nature, Sep 18, 2018.
Multidrug-Resistant Campylobacter jejuni Outbreak Linked to Puppy Exposure — United States, 2016–2018
Montgomery MP, et al. MMWR, Sep 21, 2018. Brand Brand
Towards national systems for continuous surveillance of antimicrobial resistance: Lessons from tuberculosis.
Suthar Amitabh B et al. PLoS medicine 2018 Sep (9) e1002658 Brand Brand
Should Genetic Testing for Variants Associated with Influenza Infection Be Mandatory for Health Care Employees?
Lewis MH. AMA J Ethics, Sep 2018.
Mini viral RNAs act as innate immune agonists during influenza virus infection.
Te Velthuis Aartjan J W et al. Nature microbiology 2018 Sep
Pregnancy Microbiomes Vary With Time, Body Site, Disease
GenomeWeb, Sep 19, 2018.
Metagenomic analysis with strain-level resolution reveals fine-scale variation in the human pregnancy microbiome
Goltsman DS, et al. Genome Med, Sep 19, 2018.
US officials probe Cyclospora spike, tainted US produce
Schnirring L. CIDRAP, Wep 19, 2018.
GenBank will start using expanded accession formats by December 2018
(announcement) NCBI, Sep 19, 2018.
Child Weight Gain Trajectories Linked To Oral Microbiota Composition
Craig SJ, et al. Sci Rep, Sep 19, 2018.
The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update.
Afgan Enis et al. Nucleic acids research 2018 Jul (W1) W537-W544
New Technique Allows Sequencing of Short RNAs From Dried Blood Spots, Other Small Samples
Ashford M. GenomeWeb, Sep 19, 2018.
Ebola virus Nanopore sequencing resources
(project)ARTICnetwork, Wellcome Trust.
Nanopore Sequencing Becomes More Portable to Enable Outbreak Surveillance in Field
Heger M. GenomeWeb, Sep 20, 2018.
Novel Clade C-I Clostridium difficile strains escape diagnostic tests, differ in pathogenicity potential and carry toxins on extrachromosomal elements.
Ramírez-Vargas Gabriel et al. Scientific reports 2018 Sep (1) 13951
Comprehensive Functional Analysis of the Enterococcus faecalis Core Genome Using an Ordered, Sequence-Defined Collection of Insertional Mutations in Strain OG1RF.
Dale Jennifer L et al. mSystems (5)
International high-risk clonal lineages of CTX-M-producing Escherichia coli F-ST648 in free-roaming cats, South America.
Fernandes Miriam R et al. Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases 2018 Sep
Amycomicin is a potent and specific antibiotic discovered with a targeted interaction screen.
Pishchany Gleb et al. Proceedings of the National Academy of Sciences of the United States of America 2018 Sep
Mucosal microbiota of intestinal polyps reveals putative biomarkers of colorectal cancer.
Mangifesta Marta et al. Scientific reports 2018 Sep (1) 13974
Resistance of high fitness hepatitis C virus to lethal mutagenesis.
Gallego Isabel et al. Virology 2018 10 100-109

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This Week's CDC Authored Publications

Multidrug-Resistant Campylobacter jejuni Outbreak Linked to Puppy Exposure — United States, 2016–2018
Montgomery MP, et al. MMWR, Sep 21, 2018. Brand Brand
Towards national systems for continuous surveillance of antimicrobial resistance: Lessons from tuberculosis. External Web Site Icon
Suthar Amitabh B et al. PLoS medicine 2018 Sep (9) e1002658 Brand Brand
Identifying Clusters of Recent and Rapid HIV Transmission Through Analysis of Molecular Surveillance Data. External Web Site Icon
Oster Alexandra M et al. Journal of acquired immune deficiency syndromes (1999) 2018 Sep Brand
Restriction enzyme digestion of host DNA enhances universal detection of parasitic pathogens in blood via targeted amplicon deep sequencing. External Web Site Icon
Flaherty Briana R et al. Microbiome 2018 Sep (1) 164 Brand
Replacement of neuraminidase inhibitor susceptible influenza A(H1N1) with resistant phenotype in 2008 and circulation of susceptible influenza A and B viruses during 2009-2013, South Africa. External Web Site Icon
Treurnicht Florette K et al. Influenza and other respiratory viruses 2018 Sep Brand

Top 5 Most Viewed

What's Next for the Microbiome?
Handelsman J, Stulberg ER. White House Office of Science and Technology Policy, May 21, 2015.
(90 reads)
Deep learning for biology
Webb S. Nature, Feb 20, 2017.
(75 reads)
Pandemics: spend on surveillance, not prediction
Holmes EC, et al. Nature, Jun 7, 2018.
(62 reads)
Expanding our view of the microbiome
(blog post) Collins F, NIH Director's blog, Sep 26, 2017.
(46 reads)
Next-generation Sequence-analysis Toolkit (NeST): A standardized bioinformatics framework for analyzing Single Nucleotide Polymorphisms in next-generation sequencing data
Ravishankar S, et al. bioRxiv, May 16, 2018. Brand
(45 reads)

About

This database includes published scientific literature, popular press articles, tools, and databases on the emerging role of pathogen genomics and host-pathogen interactions in infectious disease control and prevention. It includes information on methods, evolution and pathogenicity, detection and diagnosis, outbreaks, epidemiology and transmission, antimicrobials, and vaccines and host-pathogen interactions. The database contains items from all previous weekly editions of Advanced Molecular Detection Clips, as well as from the current edition. Clips are selected weekly from a variety of sources, including PubMed, journal tables of contents, and online media. View Data Selection Criteria. See the current edition.

Content Statistics

  • Total AMD Publications: 9752
  • Total AMD CDC-Authored Publications: 1034
  • Total Categories: 8
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