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Advanced Molecular Detection Clips Database|Home|PHGKB

AMD Clips Database

Last data update: Mar 14, 2019. (Total: 10687 Documents since 2015)
      CDC Author Only

This Week's New Publications

Update on Vaccine-Derived Poliovirus Outbreaks - Democratic Republic of the Congo and Horn of Africa, 2017-2018.
Mbaeyi Chukwuma et al. MMWR. Morbidity and mortality weekly report 2019 Mar (9) 225-230 Brand Brand
Did Black Death strike sub-Saharan Africa?
Wade L. Science, Mar 8, 2019.
A Gulp Of Genetically Modified Bacteria Might Someday Treat A Range Of Illnesses
Stein R. NPR, Mar 8, 2019.
Lab in South African “Township” to Sample TB from Breathed Air
Nordling L. The Scientist, Mar 8, 2019.
Sewage study highlights global antimicrobial resistance disparity
Dall C. CIDRAP, Mar 11, 2019.
Track pathogenic organisms promptly with the National Database of Antibiotic Resistant Organisms
(blog post) NCBI, Mar 11, 2019.
Microbiome-based drugs likely to face FDA’s biologics pathway
Sheridan K. STAT, Mar 11, 2019.
Innovative teaching in the digital age goes viral
(comment, links) Gomez-Lucia E. Nat Microbiol, Mar 11, 2019.
Tracing Ancient Human Migrations into Sahul Using Hepatitis B Virus Genomes.
Yuen Lilly K W et al. Molecular biology and evolution 2019 Feb
Tracing the Impact of Public Health Interventions on HIV-1 Transmission in Portugal Using Molecular Epidemiology.
Vasylyeva Tetyana I et al. The Journal of infectious diseases 2019 Feb Brand
Viral diversity from next-generation sequencing of HIV-1 samples provides precise estimates of infection recency and time since infection.
Carlisle Louisa A et al. The Journal of infectious diseases 2019 Mar
A systematic phylogenetic approach to study the interaction of HIV-1 with coinfections, non-communicable and opportunistic diseases.
Kusejko Katharina et al. The Journal of infectious diseases 2019 Mar
Development and multicentric validation of a lateral flow immunoassay for the rapid detection of MCR-1-producing Enterobacteriaceae .
Volland Hervé et al. Journal of clinical microbiology 2019 Mar
Inconsistent temporal patterns of genetic variation of HCV among high-risk subjects may impact inference of transmission networks.
Rose Rebecca et al. Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases 2019 Feb
Large genomics datasets shed light on the evolution of the Mycobacterium tuberculosis complex.
Chiner-Oms Álvaro et al. Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases 2019 Feb
Seasons of change: Mechanisms of genome evolution in human fungal pathogens.
Fillinger Robert J et al. Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases 2019 Feb
Genomic characterization of hepatitis C virus transmitted founder variants with deep sequencing.
Abayasingam Arunasingam et al. Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases 2019 Mar
HEVnet: a One Health, collaborative, interdisciplinary network and sequence data repository for enhanced hepatitis E virus molecular typing, characterisation and epidemiological investigations.
Mulder Annemieke Christine et al. Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin 2019 Mar (10) Brand
Detection in the United Kingdom of the Neisseria gonorrhoeae FC428 clone, with ceftriaxone resistance and intermediate resistance to azithromycin, October to December 2018.
Eyre David W et al. Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin 2019 Mar (10)
Hepatitis E virus in blood donors in England, 2016 to 2017: from selective to universal screening.
Harvala Heli et al. Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin 2019 Mar (10) Brand
Rapid Sequencing of Multiple RNA Viruses in Their Native Form.
Wongsurawat Thidathip et al. Frontiers in microbiology 2019 260
Genomic Analyses of >3,100 Nasopharyngeal Pneumococci Revealed Significant Differences Between Pneumococci Recovered in Four Different Geographical Regions.
van Tonder Andries J et al. Frontiers in microbiology 2019 317
Proteotyping as alternate typing method to differentiate Campylobacter coli clades.
Emele Matthias Frederik et al. Scientific reports 2019 Mar (1) 4244

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This Week's CDC Authored Publications

Building the framework for standardized clinical laboratory reporting of next generation sequencing data for resistance-associated mutations in Mycobacterium tuberculosis complex. External Web Site Icon
Tornheim Jeffrey A et al. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2019 Mar Brand
Genomic Survey of Bordetella pertussis Diversity, United States, 2000-2013. External Web Site Icon
Weigand Michael R et al. Emerging infectious diseases 2019 Apr (4) 780-783 Brand
Introduction of Ebola virus into a remote border district of Sierra Leone, 2014: use of field epidemiology and RNA sequencing to describe chains of transmission. External Web Site Icon
DeSilva M B et al. Epidemiology and infection 2019 Jan e88 Brand Brand
Update on Vaccine-Derived Poliovirus Outbreaks - Democratic Republic of the Congo and Horn of Africa, 2017-2018. External Web Site Icon
Mbaeyi Chukwuma et al. MMWR. Morbidity and mortality weekly report 2019 Mar (9) 225-230 Brand Brand
Phylogenetic relationships and regional spread of meningococcal strains in the meningitis belt, 2011-2016. External Web Site Icon
Topaz Nadav et al. EBioMedicine 2019 Mar Brand
Results of a Pilot Study of a Mail-Based Human Papillomavirus Self-Testing Program for Underscreened Women From Appalachian Ohio. External Web Site Icon
Reiter Paul L et al. Sexually transmitted diseases 2019 Mar (3) 185-190 Brand Brand
The Special Pathogens Research Network: Enabling Research Readiness. External Web Site Icon
Kraft Colleen S et al. Health security (1) 35-45 Brand Brand
Healthcare provider diagnostic testing practices for identification of Clostridioides (Clostridium) difficile in children: an Emerging Infections Network survey. External Web Site Icon
Kociolek Larry K et al. Infection control and hospital epidemiology 2019 Feb 1-5 Brand Brand

Top 5 Most Viewed

What's Next for the Microbiome?
Handelsman J, Stulberg ER. White House Office of Science and Technology Policy, May 21, 2015.
(141 reads)
Deep learning for biology
Webb S. Nature, Feb 20, 2017.
(118 reads)
Pandemics: spend on surveillance, not prediction
Holmes EC, et al. Nature, Jun 7, 2018.
(116 reads)
Next-generation Sequence-analysis Toolkit (NeST): A standardized bioinformatics framework for analyzing Single Nucleotide Polymorphisms in next-generation sequencing data
Ravishankar S, et al. bioRxiv, May 16, 2018. Brand
(96 reads)
The Recurring Dread of a Paralyzing Illness
Yong E. Atlantic, Dec 10, 2018.
(89 reads)

About

This database includes published scientific literature, popular press articles, tools, and databases on the emerging role of pathogen genomics and host-pathogen interactions in infectious disease control and prevention. It includes information on methods, evolution and pathogenicity, detection and diagnosis, outbreaks, epidemiology and transmission, antimicrobials, and vaccines and host-pathogen interactions. The database contains items from all previous weekly editions of Advanced Molecular Detection Clips, as well as from the current edition. Clips are selected weekly from a variety of sources, including PubMed, journal tables of contents, and online media. View Data Selection Criteria. See the current edition.

Content Statistics

  • Total AMD Publications: 10687
  • Total AMD CDC-Authored Publications: 1109
  • Total Categories: 8
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