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CDC-Authored Genomics and Precision Health Publications Database|Home|PHGKB

CDC-Authored Genomics and Precision Health Publications Database


Last data update: Nov 22, 2022. (Total: 4101 publications since 2011)
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Records 1-12 (of 12 Records)
Query Trace: all>>Duncan R MacCannell[CDC Author]
Wastewater sequencing reveals early cryptic SARS-CoV-2 variant transmission.
Smruthi Karthikeyan, Joshua I Levy, Peter De Hoff, Greg Humphrey, Amanda Birmingham, Kristen Jepsen, Sawyer Farmer, Helena M Tubb, Tommy Valles, Caitlin E Tribelhorn, Rebecca Tsai, Stefan Aigner, Shashank Sathe, Niema Moshiri, Benjamin Henson, Adam M Mark, Abbas Hakim, Nathan A Baer, Tom Barber, Pedro Belda-Ferre, Marisol Chacón, Willi Cheung, Evelyn S Cresini, Emily R Eisner, Alma L Lastrella, Elijah S Lawrence, Clarisse A Marotz, Toan T Ngo, Tyler Ostrander, Ashley Plascencia, Rodolfo A Salido, Phoebe Seaver, Elizabeth W Smoot, Daniel McDonald, Robert M Neuhard, Angela L Scioscia, Alysson M Satterlund, Elizabeth H Simmons, Dismas B Abelman, David Brenner, Judith C Bruner, Anne Buckley, Michael Ellison, Jeffrey Gattas, Steven L Gonias, Matt Hale, Faith Hawkins, Lydia Ikeda, Hemlata Jhaveri, Ted Johnson, Vince Kellen, Brendan Kremer, Gary Matthews, Ronald W McLawhon, Pierre Ouillet, Daniel Park, Allorah Pradenas, Sharon Reed, Lindsay Riggs, Alison Sanders, Bradley Sollenberger, Angela Song, Benjamin White, Terri Winbush, Christine M Aceves, Catelyn Anderson, Karthik Gangavarapu, Emory Hufbauer, Ezra Kurzban, Justin Lee, Nathaniel L Matteson, Edyth Parker, Sarah A Perkins, Karthik S Ramesh, Refugio Robles-Sikisaka, Madison A Schwab, Emily Spencer, Shirlee Wohl, Laura Nicholson, Ian H McHardy, David P Dimmock, Charlotte A Hobbs, Omid Bakhtar, Aaron Harding, Art Mendoza, Alexandre Bolze, David Becker, Elizabeth T Cirulli, Magnus Isaksson, Kelly M Schiabor Barrett, Nicole L Washington, John D Malone, Ashleigh Murphy Schafer, Nikos Gurfield, Sarah Stous, Rebecca Fielding-Miller, Richard S Garfein, Tommi Gaines, Cheryl Anderson, Natasha K Martin, Robert Schooley, Brett Austin, Duncan R MacCannell, Stephen F Kingsmore, William Lee, Seema Shah, Eric McDonald, Alexander T Yu, Mark Zeller, Kathleen M Fisch, Christopher Longhurst, Patty Maysent, David Pride, Pradeep K Khosla, Louise C Laurent, Gene W Yeo, Kristian G Andersen, and Rob Knight
Nature 2022
Future-proofing and maximizing the utility of metadata: The PHA4GE SARS-CoV-2 contextual data specification package.
Emma J Griffiths, Ruth E Timme, Catarina Inês Mendes, Andrew J Page, Nabil-Fareed Alikhan, Dan Fornika, Finlay Maguire, Josefina Campos, Daniel Park, Idowu B Olawoye, Paul E Oluniyi, Dominique Anderson, Alan Christoffels, Anders Gonçalves da Silva, Rhiannon Cameron, Damion Dooley, Lee S Katz, Allison Black, Ilene Karsch-Mizrachi, Tanya Barrett, Anjanette Johnston, Thomas R Connor, Samuel M Nicholls, Adam A Witney, Gregory H Tyson, Simon H Tausch, Amogelang R Raphenya, Brian Alcock, David M Aanensen, Emma Hodcroft, William W L Hsiao, Ana Tereza R Vasconcelos, and Duncan R MacCannell
GigaScience 2022 11
Genomic Surveillance for SARS-CoV-2 Variants: Predominance of the Delta (B.1.617.2) and Omicron (B.1.1.529) Variants - United States, June 2021-January 2022.
Anastasia S Lambrou, Philip Shirk, Molly K Steele, Prabasaj Paul, Clinton R Paden, Betsy Cadwell, Heather E Reese, Yutaka Aoki, Norman Hassell, Xiao-Yu Zheng, Sarah Talarico, Jessica C Chen, M Steven Oberste, Dhwani Batra, Laura K McMullan, Alison Laufer Halpin, Summer E Galloway, Duncan R MacCannell, Rebecca Kondor, John Barnes, Adam MacNeil, Benjamin J Silk, Vivien G Dugan, Heather M Scobie, David E Wentworth, ,
MMWR. Morbidity and mortality weekly report 2022 71(6) 206-211
SARS-CoV-2 Genomic Surveillance Reveals Little Spread From a Large University Campus to the Surrounding Community.
Andrew L Valesano, William J Fitzsimmons, Christopher N Blair, Robert J Woods, Julie Gilbert, Dawn Rudnik, Lindsey Mortenson, Thomas C Friedrich, David H O'Connor, Duncan R MacCannell, Joshua G Petrie, Emily T Martin, and Adam S Lauring
Open forum infectious diseases 2021 8(11) ofab518
Early introductions and transmission of SARS-CoV-2 variant B.1.1.7 in the United States.
Tara Alpert, Anderson F Brito, Erica Lasek-Nesselquist, Jessica Rothman, Andrew L Valesano, Matthew J MacKay, Mary E Petrone, Mallery I Breban, Anne E Watkins, Chantal B F Vogels, Chaney C Kalinich, Simon Dellicour, Alexis Russell, John P Kelly, Matthew Shudt, Jonathan Plitnick, Erasmus Schneider, William J Fitzsimmons, Gaurav Khullar, Jessica Metti, Joel T Dudley, Megan Nash, Nike Beaubier, Jianhui Wang, Chen Liu, Pei Hui, Anthony Muyombwe, Randy Downing, Jafar Razeq, Stephen M Bart, Ardath Grills, Stephanie M Morrison, Steven Murphy, Caleb Neal, Eva Laszlo, Hanna Rennert, Melissa Cushing, Lars Westblade, Priya Velu, Arryn Craney, Lin Cong, David R Peaper, Marie L Landry, Peter W Cook, Joseph R Fauver, Christopher E Mason, Adam S Lauring, Kirsten St George, Duncan R MacCannell, and Nathan D Grubaugh
Cell 2021 4 (10) 2595-2604.e13
Pathogen Genomics in Public Health.
Gregory L Armstrong, Duncan R MacCannell, Jill Taylor, Heather A Carleton, Elizabeth B Neuhaus, Richard S Bradbury, James E Posey, and Marta Gwinn
The New England journal of medicine 2019 Dec (26) 2569-2580
Development and validation of an internationally-standardized, high-resolution capillary gel-based electrophoresis PCR-ribotyping protocol for Clostridium difficile.
Warren N Fawley, C W Knetsch, Duncan R MacCannell, Celine Harmanus, Tim Du, Michael R Mulvey, Ashley Paulick, Lydia Anderson, E J Kuijper, and Mark H Wilcox
PloS one 2015 10(2) e0118150
Integrating advanced molecular technologies into public health.
Marta Gwinn, Duncan R MacCannell, and Rima F Khabbaz
Journal of clinical microbiology 2016 Dec
Genomic Analysis of the Emergence and Rapid Global Dissemination of the Clonal Group 258 Klebsiella pneumoniae Pandemic.
Jolene R Bowers, Brandon Kitchel, Elizabeth M Driebe, Duncan R MacCannell, Chandler Roe, Darrin Lemmer, Tom de Man, J Kamile Rasheed, David M Engelthaler, Paul Keim, and Brandi M Limbago
PLoS ONE 2015 (7) e0133727
Whole-genome analysis of Exserohilum rostratum from an outbreak of fungal meningitis and other infections.
Anastasia P Litvintseva, Steven Hurst, Lalitha Gade, Michael A Frace, Remy Hilsabeck, James M Schupp, John D Gillece, Chandler Roe, David Smith, Paul Keim, Shawn R Lockhart, Shankar Changayil, M Ryan Weil, Duncan R MacCannell, Mary E Brandt, and David M Engelthaler
J. Clin. Microbiol. 2014 Sep 52(9) 3216-22
Carbapenem-resistant Klebsiella pneumoniae producing New Delhi metallo-ß-lactamase at an acute care hospital, Colorado, 2012.
Erin E Epson, Larissa M Pisney, Joyanna M Wendt, Duncan R MacCannell, Sarah J Janelle, Brandon Kitchel, J Kamile Rasheed, Brandi M Limbago, Carolyn V Gould, Alexander J Kallen, Michelle A Barron, and Wendy M Bamberg
Infect Control Hosp Epidemiol 2014 Apr 35(4) 390-7
Canonical Single Nucleotide Polymorphisms (SNPs) for High-Resolution Subtyping of Shiga-Toxin Producing Escherichia coli (STEC) O157:H7.
Sean M Griffing, Duncan R MacCannell, Amber J Schmidtke, Molly M Freeman, Eija Hyytiä-Trees, Peter Gerner-Smidt, Efrain M Ribot, and James L Bono
PLoS ONE 2015 (7) e0131967
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