CDC-Authored Genomics and Precision Health Publications Database
Last data update: Nov 24, 2020. (Total: 3034 publications since 2011)
| Query Trace: all>>Lesley McGee[CDC Author] |
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| Features of Streptococcus agalactiae strains recovered from pregnant women and newborns attending different hospitals in Ethiopia. Musa Mohammed Ali, Yimtubezinash Woldeamanuel, Daniel Asrat, Demissie Assegu Fenta, Bernard Beall, Stephanie Schrag, and Lesley McGee BMC infectious diseases 2020 Nov 20(1) 848 |
| A Nationwide Outbreak of Invasive Pneumococcal Disease in Israel Caused by Streptococcus Pneumoniae Serotype 2. Ron Dagan, Shalom Ben-Shimol, Rachel Benisty, Gili Regev-Yochay, Stephanie W Lo, Stephen D Bentley, Paulina A Hawkins, Lesley McGee, Merav Ron, Noga Givon-Lavi, Lea Valinsky, and Assaf Rokney Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2020 Nov |
| Invasive pneumococcal strain distributions and isolate clusters associated with persons experiencing homelessness during 2018. Benjamin J Metcalf, Sopio Chochua, Hollis Walker, Theresa Tran, Zhongya Li, Jasmine Varghese, Paula M Snippes Vagnone, Ruth Lynfield, Lesley McGee, Yuan Li, Tamara Pilishvili, and Bernard Beall Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2020 Nov |
| Sequential quadriplex real-time PCR for identifying 20 common emm types of Group A Streptococcus . Srinivasan Velusamy, Katherine Jordak, Madeline Kupor, Sopio Chochua, Lesley McGee, and Bernard Beall Journal of clinical microbiology 2020 Oct |
| Bacterial genome-wide association study of hyper-virulent pneumococcal serotype 1 identifies genetic variation associated with neurotropism. Chrispin Chaguza, Marie Yang, Jennifer E Cornick, Mignon du Plessis, Rebecca A Gladstone, Brenda A Kwambana-Adams, Stephanie W Lo, Chinelo Ebruke, Gerry Tonkin-Hill, Chikondi Peno, Madikay Senghore, Stephen K Obaro, Sani Ousmane, Gerd Pluschke, Jean-Marc Collard, Betuel Sigaùque, Neil French, Keith P Klugman, Robert S Heyderman, Lesley McGee, Martin Antonio, Robert F Breiman, Anne von Gottberg, Dean B Everett, Aras Kadioglu, and Stephen D Bentley Communications biology 2020 Oct 3(1) 559 |
| Upsurge of conjugate vaccine serotype 4 invasive pneumococcal disease clusters among adults experiencing homelessness in California, Colorado, and New Mexico. Bernard Beall, Hollis Walker, Theresa Tran, Zhongya Li, Jasmine Varghese, Lesley McGee, Yuan Li, Benjamin J Metcalf, Ryan Gierke, Emily Mosites, Sopio Chochua, and Tamara Pilishvili The Journal of infectious diseases 2020 Aug |
| Within-host microevolution of Streptococcus pneumoniae is rapid and adaptive during natural colonisation. Chrispin Chaguza, Madikay Senghore, Ebrima Bojang, Rebecca A Gladstone, Stephanie W Lo, Peggy-Estelle Tientcheu, Rowan E Bancroft, Archibald Worwui, Ebenezer Foster-Nyarko, Fatima Ceesay, Catherine Okoi, Lesley McGee, Keith P Klugman, Robert F Breiman, Michael R Barer, Richard A Adegbola, Martin Antonio, Stephen D Bentley, and Brenda A Kwambana-Adams Nature communications 2020 Jul 11(1) 3442 |
| A New Pneumococcal Capsule Type, 10D, is the 100th Serotype and Has a Large cps Fragment from an Oral Streptococcus. Feroze Ganaie, Jamil S Saad, Lesley McGee, Andries J van Tonder, Stephen D Bentley, Stephanie W Lo, Rebecca A Gladstone, Paul Turner, Jeremy D Keenan, Robert F Breiman, and Moon H Nahm mBio 2020 May (3) |
| Visualizing variation within Global Pneumococcal Sequence Clusters (GPSCs) and country population snapshots to contextualize pneumococcal isolates. Rebecca A Gladstone, Stephanie W Lo, Richard Goater, Corin Yeats, Ben Taylor, James Hadfield, John A Lees, Nicholas J Croucher, Andries J van Tonder, Leon J Bentley, Fu Xiang Quah, Anne J Blaschke, Nicole L Pershing, Carrie L Byington, Veeraraghavan Balaji, Waleria Hryniewicz, Betuel Sigauque, K L Ravikumar, Samanta Cristine Grassi Almeida, Theresa J Ochoa, Pak Leung Ho, Mignon du Plessis, Kedibone M Ndlangisa, Jennifer E Cornick, Brenda Kwambana-Adams, Rachel Benisty, Susan A Nzenze, Shabir A Madhi, Paulina A Hawkins, Andrew J Pollard, Dean B Everett, Martin Antonio, Ron Dagan, Keith P Klugman, Anne von Gottberg, Benjamin J Metcalf, Yuan Li, Bernard W Beall, Lesley McGee, Robert F Breiman, David M Aanensen, Stephen D Bentley, and The Global Pneumococcal Sequencing Consortium Microbial genomics 2020 Apr |
| Multistate, population-based distributions of candidate vaccine targets, clonal complexes, and resistance features of invasive Group B Streptococci within the US: 2015-2017. Lesley McGee, Sopio Chochua, Zhongya Li, Saundra Mathis, Joy Rivers, Benjamin Metcalf, Alison Ryan, Nisha Alden, Monica M Farley, Lee H Harrison, Paula Snippes Vagnone, Ruth Lynfield, Chad Smelser, Alison Muse, Ann R Thomas, Stephanie Schrag, and Bernard W Beall Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2020 Feb |
| A mosaic tetracycline resistance gene tet(S/M) detected in an MDR pneumococcal CC230 lineage that underwent capsular switching in South Africa. Stephanie W Lo, Rebecca A Gladstone, Andries J van Tonder, Mignon du Plessis, Jennifer E Cornick, Paulina A Hawkins, Shabir A Madhi, Susan A Nzenze, Rama Kandasamy, K L Ravikumar, Naima Elmdaghri, Brenda Kwambana-Adams, Samanta Cristine Grassi Almeida, Anna Skoczynska, Ekaterina Egorova, Leonid Titov, Samir K Saha, Metka Paragi, Dean B Everett, Martin Antonio, Keith P Klugman, Yuan Li, Benjamin J Metcalf, Bernard Beall, Lesley McGee, Robert F Breiman, Stephen D Bentley, Anne von Gottberg, and The Journal of antimicrobial chemotherapy 2019 Dec |
| Multistate population and whole genome sequence based strain surveillance of invasive pneumococci recovered in the United States during 2017. Jasmine Varghese, Sopio Chochua, Theresa Tran, Hollis Walker, Zhongya Li, Paula M Snippes Vagnone, Ruth Lynfield, Lesley McGee, Yuan Li, Benjamin Metcalf, Tamara Pilishvili, and Bernard Beall Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases 2019 Sep |
| Pneumococcal lineages associated with serotype replacement and antibiotic resistance in childhood invasive pneumococcal disease in the post-PCV13 era: an international whole-genome sequencing study. Stephanie W Lo, Rebecca A Gladstone, Andries J van Tonder, John A Lees, Mignon du Plessis, Rachel Benisty, Noga Givon-Lavi, Paulina A Hawkins, Jennifer E Cornick, Brenda Kwambana-Adams, Pierra Y Law, Pak Leung Ho, Martin Antonio, Dean B Everett, Ron Dagan, Anne von Gottberg, Keith P Klugman, Lesley McGee, Robert F Breiman, Stephen D Bentley, and The Lancet. Infectious diseases 2019 Jun |
| Putative novel cps loci in a large global collection of pneumococci. Andries J van Tonder, Rebecca A Gladstone, Stephanie W Lo, Moon H Nahm, Mignon du Plessis, Jennifer Cornick, Brenda Kwambana-Adams, Shabir A Madhi, Paulina A Hawkins, Rachel Benisty, Ron Dagan, Dean Everett, Martin Antonio, Keith P Klugman, Anne von Gottberg, Robert F Breiman, Lesley McGee, Stephen D Bentley, and Microbial genomics 2019 5(7) |
| Emergent Invasive Group A Streptococcus dysgalactiae subsp. Equisimilis, United States, 2015-2018. Sopio Chochua, Joy Rivers, Saundra Mathis, Zhongya Li, Srinivasan Velusamy, Lesley McGee, Chris Van Beneden, Yuan Li, Benjamin J Metcalf, and Bernard Beall Emerging infectious diseases 2019 Aug (8) |
| Early signals of vaccine driven perturbation seen in pneumococcal carriage population genomic data. Chrispin Chaguza, Ellen Heinsbroek, Rebecca A Gladstone, Terence Tafatatha, Maaike Alaerts, Chikondi Peno, Jennifer E Cornick, Patrick Musicha, Naor Bar-Zeev, Arox Kamng'ona, Aras Kadioglu, Lesley McGee, William P Hanage, Robert F Breiman, Robert S Heyderman, Neil French, Dean B Everett, and Stephen D Bentley Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2019 May |
| International genomic definition of pneumococcal lineages, to contextualise disease, antibiotic resistance and vaccine impact. Rebecca A Gladstone, Stephanie W Lo, John A Lees, Nicholas J Croucher, Andries J van Tonder, Jukka Corander, Andrew J Page, Pekka Marttinen, Leon J Bentley, Theresa J Ochoa, Pak Leung Ho, Mignon du Plessis, Jennifer E Cornick, Brenda Kwambana-Adams, Rachel Benisty, Susan A Nzenze, Shabir A Madhi, Paulina A Hawkins, Dean B Everett, Martin Antonio, Ron Dagan, Keith P Klugman, Anne von Gottberg, Lesley McGee, Robert F Breiman, Stephen D Bentley, and EBioMedicine 2019 Apr |
| Genome-wide association analyses of invasive pneumococcal isolates identify a missense bacterial mutation associated with meningitis. Yuan Li, Benjamin J Metcalf, Sopio Chochua, Zhongya Li, Hollis Walker, Theresa Tran, Paulina A Hawkins, Ryan Gierke, Tamara Pilishvili, Lesley McGee, and Bernard W Beall Nature communications 2019 Jan (1) 178 |
| A Population-Based Descriptive Atlas of Invasive Pneumococcal Strains Recovered Within the U.S. During 2015-2016. Bernard Beall, Sopio Chochua, Robert E Gertz, Yuan Li, Zhongya Li, Lesley McGee, Benjamin J Metcalf, Jessica Ricaldi, Theresa Tran, Hollis Walker, and Tamara Pilishvili Frontiers in microbiology 2018 92670 |
| Global emergence and population dynamics of divergent serotype 3 CC180 pneumococci. Taj Azarian, Patrick K Mitchell, Maria Georgieva, Claudette M Thompson, Amel Ghouila, Andrew J Pollard, Anne von Gottberg, Mignon du Plessis, Martin Antonio, Brenda A Kwambana-Adams, Stuart C Clarke, Dean Everett, Jennifer Cornick, Ewa Sadowy, Waleria Hryniewicz, Anna Skoczynska, Jennifer C Moïsi, Lesley McGee, Bernard Beall, Benjamin J Metcalf, Robert F Breiman, P L Ho, Raymond Reid, Katherine L O'Brien, Rebecca A Gladstone, Stephen D Bentley, and William P Hanage PLoS pathogens 2018 Nov 14(11) e1007438 |
| Global distribution of invasive serotype 35D Streptococcus pneumoniae post-PCV13 introduction. Stephanie W Lo, Rebecca A Gladstone, Andries J van Tonder, Paulina A Hawkins, Brenda Kwambana-Adams, Jennifer E Cornick, Shabir A Madhi, Susan A Nzenze, Mignon du Plessis, Rama Kandasamy, Philip E Carter, Özgen Köseoglu Eser, Pak Leung Ho, Naima Elmdaghri, Sadia Shakoor, Stuart C Clarke, Martin Antonio, Dean B Everett, Anne von Gottberg, Keith P Klugman, Lesley McGee, Robert F Breiman, Stephen D Bentley, and Journal of clinical microbiology 2018 May |
| Population and Whole Genome Sequence Based Characterization of Invasive Group A Streptococci Recovered in the United States during 2015. Sopio Chochua, Ben J Metcalf, Zhongya Li, Joy Rivers, Saundra Mathis, Delois Jackson, Robert E Gertz, Velusamy Srinivasan, Ruth Lynfield, Chris Van Beneden, Lesley McGee, and Bernard Beall mBio 2017 Sep (5) |
| Antimicrobial resistance determinants and susceptibility profiles of pneumococcal isolates recovered in Trinidad and Tobago. Paulina A Hawkins, Patrick E Akpaka, Michele Nurse-Lucas, Rebecca Gladstone, Stephen D Bentley, Robert F Breiman, Lesley McGee, and William H Swanston Journal of global antimicrobial resistance 2017 Aug |
| Validation of ß-lactam minimum inhibitory concentration predictions for pneumococcal isolates with newly encountered penicillin binding protein (PBP) sequences. Yuan Li, Benjamin J Metcalf, Sopio Chochua, Zhongya Li, Robert E Gertz, Hollis Walker, Paulina A Hawkins, Theresa Tran, Lesley McGee, Bernard W Beall, and BMC genomics 2017 Aug (1) 621 |
| Key features of invasive pneumococcal isolates recovered in Lima, Peru determined through whole genome sequencing. Paulina Hawkins, Erik Mercado, Sopio Chochua, Maria E Castillo, Isabel Reyes, Eduardo Chaparro, Rebecca Gladstone, Stephen D Bentley, Robert F Breiman, Benjamin J Metcalf, Bernard Beall, Theresa J Ochoa, and Lesley McGee International journal of medical microbiology : IJMM 2017 Jul |
| Population genetic structure, antibiotic resistance, capsule switching and evolution of invasive pneumococci before conjugate vaccination in Malawi. Chrispin Chaguza, Jennifer E Cornick, Cheryl P Andam, Rebecca A Gladstone, Maaike Alaerts, Patrick Musicha, Chikondi Peno, Naor Bar-Zeev, Arox W Kamng'ona, Anmol M Kiran, Chisomo L Msefula, Lesley McGee, Robert F Breiman, Aras Kadioglu, Neil French, Robert S Heyderman, William P Hanage, Stephen D Bentley, and Dean B Everett Vaccine 2017 Jul |
| Invasive Serotype 35B Pneumococci Including an Expanding Serotype Switch Lineage, United States, 2015-2016. Sopio Chochua, Benjamin J Metcalf, Zhongya Li, Hollis Walker, Theresa Tran, Lesley McGee, and Bernard Beall Emerging infectious diseases 2017 06 (6) 922-930 |
| Cross-resistance to lincosamides, streptogramins A and pleuromutilins in Streptococcus agalactiae isolates from the USA. Paulina A Hawkins, Caitlin S Law, Benjamin J Metcalf, Sopio Chochua, Delois M Jackson, Lars F Westblade, Robert Jerris, Bernard W Beall, and Lesley McGee The Journal of antimicrobial chemotherapy 2017 Mar |
| Genomic epidemiology of penicillin non-susceptible pneumococci with non-vaccine serotypes causing invasive disease in the USA. Cheryl P Andam, Patrick K Mitchell, Alanna Callendrello, Qiuzhi Chang, Jukka Corander, Chrispin Chaguza, Lesley McGee, Bernard W Beall, and William P Hanage Journal of clinical microbiology 2017 Jan |
| The global distribution and diversity of protein vaccine candidate antigens in the highly virulent Streptococcus pnuemoniae serotype 1. Jennifer E Cornick, Özlem Tastan Bishop, Feyruz Yalcin, Anmol M Kiran, Benjamin Kumwenda, Chrispin Chaguza, Shanil Govindpershad, Sani Ousmane, Madikay Senghore, Mignon du Plessis, Gerd Pluschke, Chinelo Ebruke, Lesley McGee, Beutel Sigaùque, Jean-Marc Collard, Stephen D Bentley, Aras Kadioglu, Martin Antonio, Anne von Gottberg, Neil French, Keith P Klugman, Robert S Heyderman, Mark Alderson, Dean B Everett, and Vaccine 2017 Jan |
- Page last reviewed:Oct 1, 2020
- Page last updated:Nov 24, 2020
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