CDC-Authored Genomics and Precision Health Publications Database
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Last data update: Nov 14, 2019. (Total: 2701 publications since 2011)
| Query Trace: all>>Lesley McGee[CDC Author] |
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| Multistate population and whole genome sequence based strain surveillance of invasive pneumococci recovered in the United States during 2017. Jasmine Varghese, Sopio Chochua, Theresa Tran, Hollis Walker, Zhongya Li, Paula M Snippes Vagnone, Ruth Lynfield, Lesley McGee, Yuan Li, Benjamin Metcalf, Tamara Pilishvili, and Bernard Beall Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases 2019 Sep |
| Pneumococcal lineages associated with serotype replacement and antibiotic resistance in childhood invasive pneumococcal disease in the post-PCV13 era: an international whole-genome sequencing study. Stephanie W Lo, Rebecca A Gladstone, Andries J van Tonder, John A Lees, Mignon du Plessis, Rachel Benisty, Noga Givon-Lavi, Paulina A Hawkins, Jennifer E Cornick, Brenda Kwambana-Adams, Pierra Y Law, Pak Leung Ho, Martin Antonio, Dean B Everett, Ron Dagan, Anne von Gottberg, Keith P Klugman, Lesley McGee, Robert F Breiman, Stephen D Bentley, and The Lancet. Infectious diseases 2019 Jun |
| Emergent Invasive Group A Streptococcus dysgalactiae subsp. Equisimilis, United States, 2015-2018. Sopio Chochua, Joy Rivers, Saundra Mathis, Zhongya Li, Srinivasan Velusamy, Lesley McGee, Chris Van Beneden, Yuan Li, Benjamin J Metcalf, and Bernard Beall Emerging infectious diseases 2019 Aug (8) |
| Early signals of vaccine driven perturbation seen in pneumococcal carriage population genomic data. Chrispin Chaguza, Ellen Heinsbroek, Rebecca A Gladstone, Terence Tafatatha, Maaike Alaerts, Chikondi Peno, Jennifer E Cornick, Patrick Musicha, Naor Bar-Zeev, Arox Kamng'ona, Aras Kadioglu, Lesley McGee, William P Hanage, Robert F Breiman, Robert S Heyderman, Neil French, Dean B Everett, and Stephen D Bentley Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2019 May |
| International genomic definition of pneumococcal lineages, to contextualise disease, antibiotic resistance and vaccine impact. Rebecca A Gladstone, Stephanie W Lo, John A Lees, Nicholas J Croucher, Andries J van Tonder, Jukka Corander, Andrew J Page, Pekka Marttinen, Leon J Bentley, Theresa J Ochoa, Pak Leung Ho, Mignon du Plessis, Jennifer E Cornick, Brenda Kwambana-Adams, Rachel Benisty, Susan A Nzenze, Shabir A Madhi, Paulina A Hawkins, Dean B Everett, Martin Antonio, Ron Dagan, Keith P Klugman, Anne von Gottberg, Lesley McGee, Robert F Breiman, Stephen D Bentley, and EBioMedicine 2019 Apr |
| Genome-wide association analyses of invasive pneumococcal isolates identify a missense bacterial mutation associated with meningitis. Yuan Li, Benjamin J Metcalf, Sopio Chochua, Zhongya Li, Hollis Walker, Theresa Tran, Paulina A Hawkins, Ryan Gierke, Tamara Pilishvili, Lesley McGee, and Bernard W Beall Nature communications 2019 Jan (1) 178 |
| A Population-Based Descriptive Atlas of Invasive Pneumococcal Strains Recovered Within the U.S. During 2015-2016. Bernard Beall, Sopio Chochua, Robert E Gertz, Yuan Li, Zhongya Li, Lesley McGee, Benjamin J Metcalf, Jessica Ricaldi, Theresa Tran, Hollis Walker, and Tamara Pilishvili Frontiers in microbiology 2018 92670 |
| Global emergence and population dynamics of divergent serotype 3 CC180 pneumococci. Taj Azarian, Patrick K Mitchell, Maria Georgieva, Claudette M Thompson, Amel Ghouila, Andrew J Pollard, Anne von Gottberg, Mignon du Plessis, Martin Antonio, Brenda A Kwambana-Adams, Stuart C Clarke, Dean Everett, Jennifer Cornick, Ewa Sadowy, Waleria Hryniewicz, Anna Skoczynska, Jennifer C Moïsi, Lesley McGee, Bernard Beall, Benjamin J Metcalf, Robert F Breiman, P L Ho, Raymond Reid, Katherine L O'Brien, Rebecca A Gladstone, Stephen D Bentley, and William P Hanage PLoS pathogens 2018 Nov 14(11) e1007438 |
| Causes and incidence of community-acquired serious infections among young children in south Asia (ANISA): an observational cohort study. Samir K Saha, Stephanie J Schrag, Shams El Arifeen, Luke C Mullany, Mohammad Shahidul Islam, Nong Shang, Shamim A Qazi, Anita K M Zaidi, Zulfiqar A Bhutta, Anuradha Bose, Pinaki Panigrahi, Sajid B Soofi, Nicholas E Connor, Dipak K Mitra, Rita Isaac, Jonas M Winchell, Melissa L Arvay, Maksuda Islam, Yasir Shafiq, Imran Nisar, Benazir Baloch, Furqan Kabir, Murtaza Ali, Maureen H Diaz, Radhanath Satpathy, Pritish Nanda, Bijaya K Padhi, Sailajanandan Parida, Aneeta Hotwani, M Hasanuzzaman, Sheraz Ahmed, Mohammad Belal Hossain, Shabina Ariff, Imran Ahmed, Syed Mamun Ibne Moin, Arif Mahmud, Jessica L Waller, Iftekhar Rafiqullah, Mohammad A Quaiyum, Nazma Begum, Veeraraghavan Balaji, Jasmin Halen, A S M Nawshad Uddin Ahmed, Martin W Weber, Davidson H Hamer, Patricia L Hibberd, Qazi Sadeq-Ur Rahman, Venkat Raghava Mogan, Tanvir Hossain, Lesley McGee, Shalini Anandan, Anran Liu, Kalpana Panigrahi, Asha Mary Abraham, and Abdullah H Baqui Lancet (London, England) 2018 Jul 392(10142) 145-159 |
| Global distribution of invasive serotype 35D Streptococcus pneumoniae post-PCV13 introduction. Stephanie W Lo, Rebecca A Gladstone, Andries J van Tonder, Paulina A Hawkins, Brenda Kwambana-Adams, Jennifer E Cornick, Shabir A Madhi, Susan A Nzenze, Mignon du Plessis, Rama Kandasamy, Philip E Carter, Özgen Köseoglu Eser, Pak Leung Ho, Naima Elmdaghri, Sadia Shakoor, Stuart C Clarke, Martin Antonio, Dean B Everett, Anne von Gottberg, Keith P Klugman, Lesley McGee, Robert F Breiman, Stephen D Bentley, and Journal of clinical microbiology 2018 May |
| Population and Whole Genome Sequence Based Characterization of Invasive Group A Streptococci Recovered in the United States during 2015. Sopio Chochua, Ben J Metcalf, Zhongya Li, Joy Rivers, Saundra Mathis, Delois Jackson, Robert E Gertz, Velusamy Srinivasan, Ruth Lynfield, Chris Van Beneden, Lesley McGee, and Bernard Beall mBio 2017 Sep (5) |
| Antimicrobial resistance determinants and susceptibility profiles of pneumococcal isolates recovered in Trinidad and Tobago. Paulina A Hawkins, Patrick E Akpaka, Michele Nurse-Lucas, Rebecca Gladstone, Stephen D Bentley, Robert F Breiman, Lesley McGee, and William H Swanston Journal of global antimicrobial resistance 2017 Aug |
| Validation of ß-lactam minimum inhibitory concentration predictions for pneumococcal isolates with newly encountered penicillin binding protein (PBP) sequences. Yuan Li, Benjamin J Metcalf, Sopio Chochua, Zhongya Li, Robert E Gertz, Hollis Walker, Paulina A Hawkins, Theresa Tran, Lesley McGee, Bernard W Beall, and BMC genomics 2017 Aug (1) 621 |
| Key features of invasive pneumococcal isolates recovered in Lima, Peru determined through whole genome sequencing. Paulina Hawkins, Erik Mercado, Sopio Chochua, Maria E Castillo, Isabel Reyes, Eduardo Chaparro, Rebecca Gladstone, Stephen D Bentley, Robert F Breiman, Benjamin J Metcalf, Bernard Beall, Theresa J Ochoa, and Lesley McGee International journal of medical microbiology : IJMM 2017 Jul |
| Population genetic structure, antibiotic resistance, capsule switching and evolution of invasive pneumococci before conjugate vaccination in Malawi. Chrispin Chaguza, Jennifer E Cornick, Cheryl P Andam, Rebecca A Gladstone, Maaike Alaerts, Patrick Musicha, Chikondi Peno, Naor Bar-Zeev, Arox W Kamng'ona, Anmol M Kiran, Chisomo L Msefula, Lesley McGee, Robert F Breiman, Aras Kadioglu, Neil French, Robert S Heyderman, William P Hanage, Stephen D Bentley, and Dean B Everett Vaccine 2017 Jul |
| Invasive Serotype 35B Pneumococci Including an Expanding Serotype Switch Lineage, United States, 2015-2016. Sopio Chochua, Benjamin J Metcalf, Zhongya Li, Hollis Walker, Theresa Tran, Lesley McGee, and Bernard Beall Emerging infectious diseases 2017 06 (6) 922-930 |
| Cross-resistance to lincosamides, streptogramins A and pleuromutilins in Streptococcus agalactiae isolates from the USA. Paulina A Hawkins, Caitlin S Law, Benjamin J Metcalf, Sopio Chochua, Delois M Jackson, Lars F Westblade, Robert Jerris, Bernard W Beall, and Lesley McGee The Journal of antimicrobial chemotherapy 2017 Mar |
| Genomic epidemiology of penicillin non-susceptible pneumococci with non-vaccine serotypes causing invasive disease in the USA. Cheryl P Andam, Patrick K Mitchell, Alanna Callendrello, Qiuzhi Chang, Jukka Corander, Chrispin Chaguza, Lesley McGee, Bernard W Beall, and William P Hanage Journal of clinical microbiology 2017 Jan |
| The global distribution and diversity of protein vaccine candidate antigens in the highly virulent Streptococcus pnuemoniae serotype 1. Jennifer E Cornick, Özlem Tastan Bishop, Feyruz Yalcin, Anmol M Kiran, Benjamin Kumwenda, Chrispin Chaguza, Shanil Govindpershad, Sani Ousmane, Madikay Senghore, Mignon du Plessis, Gerd Pluschke, Chinelo Ebruke, Lesley McGee, Beutel Sigaùque, Jean-Marc Collard, Stephen D Bentley, Aras Kadioglu, Martin Antonio, Anne von Gottberg, Neil French, Keith P Klugman, Robert S Heyderman, Mark Alderson, Dean B Everett, and Vaccine 2017 Jan |
| Understanding pneumococcal serotype 1 biology through population genomic analysis. Chrispin Chaguza, Jennifer E Cornick, Simon R Harris, Cheryl P Andam, Laura Bricio-Moreno, Marie Yang, Feyruz Yalcin, Sani Ousmane, Shanil Govindpersad, Madikay Senghore, Chinelo Ebruke, Mignon du Plessis, Anmol M Kiran, Gerd Pluschke, Betuel Sigauque, Lesley McGee, Keith P Klugman, Paul Turner, Jukka Corander, Julian Parkhill, Jean-Marc Collard, Martin Antonio, Anne von Gottberg, Robert S Heyderman, Neil French, Aras Kadioglu, William P Hanage, Dean B Everett, Stephen D Bentley, and BMC infectious diseases 2016 Nov (1) 649 |
| Streptococcus pneumoniae of Serotypes 9 and 14 Circulating in Brazil Over a 23-Year Period Prior to the Introduction of PCV10: Role of International Clones in the Evolution of Antimicrobial Resistance and Description of a Novel Genotype. Tatiana C A Pinto, Fabíola C O Kegele, Cícero A G Dias, Rosana R Barros, José M Peralta, Vânia L C Merquior, Maria da Gloria Carvalho, Sopio Chochua, Paulina Hawkins, Lesley McGee, and Lucia M Teixeira Antimicrobial agents and chemotherapy 2016 Aug |
| Characteristics of serogroup 20?S.pneumoniae isolates from Brazil. Juliana Caierão, Fernando Hayashi Sant'Anna, Paulina Hawkins, Gabriela Rosa Cunha, Mariana Mott, Diego Rodrigues Falci, Pedro Alves d'Azevedo, Lesley McGee, and Cícero Dias BMC infectious diseases 2016 16(1) 418 |
| Penicillin-Binding Protein Transpeptidase Signatures for Tracking and Predicting ß-Lactam Resistance Levels in Streptococcus pneumoniae. Yuan Li, Benjamin J Metcalf, Sopio Chochua, Zhongya Li, Robert E Gertz, Hollis Walker, Paulina A Hawkins, Theresa Tran, Cynthia G Whitney, Lesley McGee, and Bernard W Beall mBio 2016 7(3) |
| Biological and Epidemiological Features of Antibiotic-Resistant Streptococcus pneumoniae in Pre- and Post-Conjugate Vaccine Eras: a United States Perspective. Lindsay Kim, Lesley McGee, Sara Tomczyk, and Bernard Beall Clinical microbiology reviews 2016 Jul (3) 525-52 |
| Development and Implementation of the ANISA Labeling and Tracking System for Biological Specimens. Nicholas E Connor, Tanvir Hossain, Qazi Sadeq-ur Rahman, Mohammad Shahidul Islam, Maksuda Islam, Belal Hossain, Lesley McGee, Maureen Helen Diaz, Stephanie J Schrag, Shams El Arifeen, Samir K Saha, and The Pediatric infectious disease journal 2016 May 35(5 Suppl 1) S29-34 |
| Laboratory Methods for Determining Etiology of Neonatal Infection at Population-based Sites in South Asia: The ANISA Study. Samir K Saha, Mohammad Shahidul Islam, Shahida M Qureshi, Belal Hossain, Maksuda Islam, Anita K Zaidi, Joyanta K Modak, Hasan M Al-Emran, Maureen H Diaz, Lesley McGee, Jonas M Winchell, and The Pediatric infectious disease journal 2016 May (5 Suppl 1) S16-22 |
| Serotypes and genotypes of Streptococcus pneumoniae isolates from Trinidad and Tobago. Michele Nurse-Lucas, Lesley McGee, Paulina A Hawkins, William H Swanston, and Patrick Eberechi Akpaka International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases 2016 Apr |
| Multistate Outbreak of Respiratory Infections among Unaccompanied Children, June-July 2014. Sara Tomczyk, Carmen S Arriola, Bernard Beall, Alvaro Benitez, Stephen R Benoit, LaShondra Berman, Joseph Bresee, Maria da Gloria Carvalho, Amanda Cohn, Kristen Cross, Maureen H Diaz, Louise K Francois Watkins, Ryan Gierke, Jose E Hagan, Aaron M Harris, Seema Jain, Lindsay Kim, Miwako Kobayashi, Stephen Lindstrom, Lesley McGee, Meredith McMorrow, Benjamin L Metcalf, Matthew R Moore, Iaci Moura, W Allan Nix, Edith Nyangoma, M Steven Oberste, Sonja J Olsen, Fabiana Pimenta, Christina Socias, Kathleen Thurman, Jessica Waller, Stephen H Waterman, Matthew Westercamp, Melinda Wharton, Cynthia G Whitney, Jonas M Winchell, Bernard Wolff, and Curi Kim Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2016 Mar |
| Phylogenetic Analysis of Invasive Serotype 1 Pneumococcus in South Africa, 1989-2013. Mignon du Plessis, Mushal Allam, Stefano Tempia, Nicole Wolter, Linda de Gouveia, Claire von Mollendorf, Keith A Jolley, Nontombi Mbelle, Jeannette Wadula, Jennifer E Cornick, Dean B Everett, Lesley McGee, Robert F Breiman, Rebecca A Gladstone, Stephen D Bentley, Keith P Klugman, and Anne von Gottberg Journal of clinical microbiology 2016 Mar |
| Global phylogenomic analysis of nonencapsulated Streptococcus pneumoniae reveals a deep-branching classic lineage that is distinct from multiple sporadic lineages. Markus Hilty, Daniel Wüthrich, Susannah J Salter, Hansjürg Engel, Samuel Campbell, Raquel Sá-Leão, Hermínia de Lencastre, Peter Hermans, Ewa Sadowy, Paul Turner, Claire Chewapreecha, Mathew Diggle, Gerd Pluschke, Lesley McGee, Özgen Köseoglu Eser, Donald E Low, Heidi Smith-Vaughan, Andrea Endimiani, Marianne Küffer, Mélanie Dupasquier, Emmanuel Beaudoing, Johann Weber, Rémy Bruggmann, William P Hanage, Julian Parkhill, Lucy J Hathaway, Kathrin Mühlemann, and Stephen D Bentley Genome Biol Evol 2014 Dec 6(12) 3281-94 |
| Serotypes and genotypes of invasive Streptococcus pneumoniae before and after PCV10 implementation in southern Brazil. Juliana Caierão, Paulina Hawkins, Fernando Hayashi Sant'Anna, Gabriela Rosa da Cunha, Pedro Alves d'Azevedo, Lesley McGee, and Cícero Dias PLoS ONE 2014 9(10) e111129 |
| Evidence for clonal expansion after antibiotic selection pressure: pneumococcal multilocus sequence types before and after mass azithromycin treatments. Jeremy D Keenan, Keith P Klugman, Lesley McGee, Jorge E Vidal, Sopio Chochua, Paulina Hawkins, Vicky Cevallos, Teshome Gebre, Zerihun Tadesse, Paul M Emerson, James H Jorgensen, Bruce D Gaynor, and Thomas M Lietman J. Infect. Dis. 2015 Mar 15. 211(6) 988-94 |
| Evidence for soft selective sweeps in the evolution of pneumococcal multidrug resistance and vaccine escape. Nicholas J Croucher, Claire Chewapreecha, William P Hanage, Simon R Harris, Lesley McGee, Mark van der Linden, Jae-Hoon Song, Kwan Soo Ko, Herminia de Lencastre, Claudia Turner, Fan Yang, Raquel Sá-Leão, Bernard Beall, Keith P Klugman, Julian Parkhill, Paul Turner, and Stephen D Bentley Genome biology and evolution 2014 Jul (7) 1589-602 |
| Pneumococcal capsular switching: a historical perspective. Kelly L Wyres, Lotte M Lambertsen, Nicholas J Croucher, Lesley McGee, Anne von Gottberg, Josefina Liñares, Michael R Jacobs, Karl G Kristinsson, Bernard W Beall, Keith P Klugman, Julian Parkhill, Regine Hakenbeck, Stephen D Bentley, and Angela B Brueggemann J. Infect. Dis. 2013 Feb 1. 207(3) 439-49 |
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- Page last updated:Nov 14, 2019
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