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CDC-Authored Genomics and Precision Health Publications Database|Home|PHGKB

CDC-Authored Genomics and Precision Health Publications Database


Last data update: Dec 04, 2023. (Total: 4781 publications since 2011)
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Records 1-30 (of 69 Records)
Query Trace: all>>Lesley McGee[CDC Author]
Discovery and Characterization of Pneumococcal Serogroup 36 Capsule Subtypes, Serotypes 36A and 36B.
Ganaie FA , Saad JS , Lo SW , McGee L , Bentley SD , vanTonder AJ , Hawkins P , Keenan JD , Calix JJ , Nahm MH .
J Clin Microbiol 2023 e0002423
Key features of pneumococcal isolates recovered in Central and Northwestern Russia in 2011-2018 determined through whole-genome sequencing.
Egorova E , Kumar N , Gladstone RA , Urban Y , Voropaeva E , Chaplin AV , Rumiantseva E , Svistunova TS , Hawkins PA , Klugman KP , Breiman RF , McGee L , Bentley SD , Lo SW .
Microb Genom 2022 8 (9)
Emergence of a multidrug-resistant and virulent Streptococcus pneumoniae lineage mediates serotype replacement after PCV13: an international whole-genome sequencing study.
Lo SW , Mellor K , Cohen R , Alonso AR , Belman S , Kumar N , Hawkins PA , Gladstone RA , vonGottberg A , Veeraraghavan B , Ravikumar KL , Kandasamy R , Pollard SAJ , Saha SK , Bigogo G , Antonio M , Kwambana-Adams B , Mirza S , Shakoor S , Nisar I , Cornick JE , Lehmann D , Ford RL , Sigauque B , Turner P , Mosi J , Obaro SK , Dagan R , Diawara I , Skoczyska A , Wang H , Carter PE , Klugman KP , Rodgers G , Breiman RF , McGee L , Bentley SD , Almagro CM , Varon E .
Lancet Microbe 2022 3 (10) e735-e743 type
Invasive Group A Streptococcal Penicillin Binding Protein 2× Variants Associated with Reduced Susceptibility to β-Lactam Antibiotics in the United States, 2015-2021.
Chochua S , Metcalf B , Li Z , Mathis S , Tran T , Rivers J , Fleming-Dutra KE , Li Y , McGee L , Beall B .
Antimicrob Agents Chemother 2022 66 (9) e0080222
Distinct Streptococcus pneumoniae cause invasive disease in Papua New Guinea.
Mellor KC , Lo S , Yoannes M , Michael A , Orami T , Greenhill AR , Breiman RF , Hawkins P , McGee L , Bentley SD , Ford RL , Lehmann D .
Microb Genom 2022 8 (7)
Effect of childhood vaccination and antibiotic use on pneumococcal populations and genome-wide associations with disease among children in Nepal: an observational study.
Kandasamy R , Lo S , Gurung M , Carter MJ , Gladstone R , Lees J , Shrestha S , Thorson S , Bijukchhe S , Gautam MC , Shrestha R , Gurung S , Khadka B , McGee L , Breiman RF , Murdoch DR , Kelly DF , Shrestha S , Bentley SD , Pollard AJ .
Lancet Microbe 2022 3 (7) e503-e511 type
Genetic background of Cambodian pneumococcal carriage isolates following pneumococcal conjugate vaccine 13.
Belman S , Soeng S , Soputhy C , Gladstone R , Hawkins PA , Breiman RF , McGee L , Bentley SD , Lo SW , Turner P .
Microb Genom 2022 8 (6) type
Population genomics of pneumococcal carriage in South Africa following the introduction of the 13-valent pneumococcal conjugate vaccine (PCV13) immunization.
Javaid N , Olwagen C , Nzenze S , Hawkins P , Gladstone R , McGee L , Breiman RF , Bentley SD , Madhi SA , Lo S .
Microb Genom 2022 8 (6) type
Continued Increase of Erythromycin- and Clindamycin-Nonsusceptibility among Invasive Group A Streptococci Driven by Genomic Clusters, USA, 2018-2019.
Li Y , Rivers J , Mathis S , Li Z , McGee L , Chochua S , Metcalf BJ , Fleming-Dutra KE , Nanduri SA , Beall B .
Clin Infect Dis 2022 76 (3) e1266-e1269 type
Cluster Transmission Drives Invasive Group A Streptococcus Disease Within the US and is Focused on Communities Experiencing Disadvantage.
Metcalf B , Nanduri S , Chochua S , Li Y , Fleming-Dutra K , McGee L , Beall B .
J Infect Dis 2022 226 (3) 546-553 type
Comparative genomics of disease and carriage serotype 1 pneumococci.
Chaguza C , Ebruke C , Senghore M , Lo SW , Tientcheu PE , Gladstone RA , Tonkin-Hill G , Cornick JE , Yang M , Worwui A , McGee L , Breiman RF , Klugman KP , Kadioglu A , Everett DB , Mackenzie G , Croucher NJ , Roca A , Kwambana-Adams BA , Antonio M , Bentley SD .
Genome Biol Evol 2022 14 (4) type
A Streptococcus pneumoniae lineage usually associated with pneumococcal conjugate vaccine (PCV) serotypes is the most common cause of serotype 35B invasive disease in South Africa, following routine use of PCV.
Ndlangisa KM , duPlessis M , Lo S , deGouveia L , Chaguza C , Antonio M , Kwambana-Adams B , Cornick J , Everett DB , Dagan R , Hawkins PA , Beall B , Corso A , GrassiAlmeida SC , Ochoa TJ , Obaro S , Shakoor S , Donkor ES , Gladstone RA , Ho PL , Paragi M , Doiphode S , Srifuengfung S , Ford R , Mosi J , Saha SK , Bigogo G , Sigauque B , Eser K , Elmdaghri N , Titov L , Turner P , Kumar KLR , Kandasamy R , Egorova E , Ip M , Breiman RF , Klugman KP , McGee L , Bentley SD , vonGottberg A , TheGlobalPneumococcalSequencing Consortium .
Microb Genom 2022 8 (4) type
Widespread sharing of pneumococcal strains in a rural African setting: proximate villages are more likely to share similar strains that are carried at multiple timepoints.
Senghore M , Chaguza C , Bojang E , Tientcheu PE , Bancroft RE , Lo SW , Gladstone RA , McGee L , Worwui A , Foster-Nyarko E , Ceesay F , Okoi CB , Klugman KP , Breiman RF , Bentley SD , Adegbola R , Antonio M , Hanage WP , Kwambana-Adams BA .
Microb Genom 2022 8 (2) type
Invasive pneumococcal disease clusters disproportionally impact persons experiencing homelessness, injecting drug users, and the western United States.
Beall B , Chochua S , Li Z , Tran T , Varghese J , McGee L , Li Y , Metcalf B .
J Infect Dis 2022 226 (2) 332-341 type
Genomic Characterization of Group A Streptococci Causing Pharyngitis and Invasive Disease in Colorado, USA, June 2016 - April 2017.
Li Y , Dominguez S , Nanduri SA , Rivers J , Mathis S , Li Z , McGee L , Chochua S , Metcalf BJ , VanBeneden CA , Beall B , Miller L .
J Infect Dis 2021 225 (10) 1841-1851 type
Genomic surveillance of invasive Streptococcus pneumoniae isolates in the period pre-PCV10 and post-PCV10 introduction in Brazil.
Almeida SCG , Lo SW , Hawkins PA , Gladstone RA , Cassiolato AP , Klugman KP , Breiman RF , Bentley SD , McGee L , Brandileone MC .
Microb Genom 2021 7 (10) type
Population genetic structure, serotype distribution and antibiotic resistance of Streptococcus pneumoniae causing invasive disease in children in Argentina.
Gagetti P , Lo SW , Hawkins PA , Gladstone RA , Regueira M , Faccone D , Sireva-ArgentinaGroup , Klugman KP , Breiman RF , McGee L , Bentley SD , Corso A .
Microb Genom 2021 7 (9) type
Streptococcus pneumoniae genomic datasets from an Indian population describing pre-vaccine evolutionary epidemiology using a whole genome sequencing approach.
Nagaraj G , Govindan V , Ganaie F , Venkatesha VT , Hawkins PA , Gladstone RA , McGee L , Breiman RF , Bentley SD , Klugman KP , Lo SW , Ravikumar KL .
Microb Genom 2021 7 (9)
Whole genome sequence based capsular typing and antimicrobial resistance prediction of Group B streptococcal isolates from colonized pregnant women in Nigeria.
Bob-Manuel M , McGee L , Igunma JA , Alex-Wele MA , Obunge OK , Wariso KT .
BMC Genomics 2021 22 (1) 627 type
Phylogeography and resistome of pneumococcal meningitis in West Africa before and after vaccine introduction.
Senghore M , Tientcheu PE , Worwui AK , Jarju S , Okoi C , Suso SMS , Foster-Nyarko E , Ebruke C , Sonko M , Kourna MH , Agossou J , Tsolenyanu E , Renner LA , Ansong D , Sanneh B , Cisse CB , Boula A , Miwanda B , Lo SW , Gladstone RA , Schwartz S , Hawkins P , McGee L , Klugman KP , Breiman RF , Bentley SD , Mwenda JM , Kwambana-Adams BA , Antonio M .
Microb Genom 2021 7 (7) type
The role of interspecies recombinations in the evolution of antibiotic resistant pneumococci.
D'Aeth JC , vanderLinden MPG , McGee L , DeLencastre H , Turner P , Song JH , Lo SW , Gladstone RA , Sa-Leao R , Ko KS , Hanage WP , Breiman RF , Beall B , Bentley SD , Croucher NJ .
Elife 2021 10 type
Low but Increasing Prevalence of Reduced Beta-lactam Susceptibility Among Invasive Group B Streptococcal Isolates, US Population-Based Surveillance, 1998-2018.
Kobayashi M , McGee L , Chochua S , Apostol M , Alden NB , Farley MM , Harrison LH , Lynfield R , Vagnone PS , Smelser C , Muse A , Thomas AR , Deng L , Metcalf BJ , Beall BW , Schrag SJ .
Open Forum Infect Dis 2021 8 (2) ofaa634 type
Carriage Dynamics of Pneumococcal Serotypes in Naturally Colonized Infants in a Rural African Setting During the First Year of Life.
Chaguza C , Senghore M , Bojang E , Lo SW , Ebruke C , Gladstone RA , Tientcheu PE , Bancroft RE , Worwui A , Foster-Nyarko E , Ceesay F , Okoi C , McGee L , Klugman KP , Breiman RF , Barer MR , Adegbola RA , Antonio M , Bentley SD , Kwambana-Adams BA .
Front Pediatr 2020 8 587730
Invasive pneumococcal strain distributions and isolate clusters associated with persons experiencing homelessness during 2018.
Metcalf BJ , Chochua S , Walker H , Tran T , Li Z , Varghese J , SnippesVagnone PM , Lynfield R , McGee L , Li Y , Pilishvili T , Beall B .
Clin Infect Dis 2020 72 (12) e948-e956 type
A Nationwide Outbreak of Invasive Pneumococcal Disease in Israel Caused by Streptococcus Pneumoniae Serotype 2.
Dagan R , Ben-Shimol S , Benisty R , Regev-Yochay G , Lo SW , Bentley SD , Hawkins PA , McGee L , Ron M , Givon-Lavi N , Valinsky L , Rokney A .
Clin Infect Dis 2020 73 (11) e3768-e3777
Features of Streptococcus agalactiae strains recovered from pregnant women and newborns attending different hospitals in Ethiopia.
Ali MM , Woldeamanuel Y , Asrat D , Fenta DA , Beall B , Schrag S , McGee L .
BMC Infect Dis 2020 20 (1) 848 type
Sequential quadriplex real-time PCR for identifying 20 common emm types of Group A Streptococcus .
Velusamy S , Jordak K , Kupor M , Chochua S , McGee L , Beall B .
J Clin Microbiol 2020 59 (1) type
Bacterial genome-wide association study of hyper-virulent pneumococcal serotype 1 identifies genetic variation associated with neurotropism.
Chaguza C , Yang M , Cornick JE , duPlessis M , Gladstone RA , Kwambana-Adams BA , Lo SW , Ebruke C , Tonkin-Hill G , Peno C , Senghore M , Obaro SK , Ousmane S , Pluschke G , Collard JM , Sigaque B , French N , Klugman KP , Heyderman RS , McGee L , Antonio M , Breiman RF , vonGottberg A , Everett DB , Kadioglu A , Bentley SD .
Commun Biol 2020 3 (1) 559
Upsurge of conjugate vaccine serotype 4 invasive pneumococcal disease clusters among adults experiencing homelessness in California, Colorado, and New Mexico.
Beall B , Walker H , Tran T , Li Z , Varghese J , McGee L , Li Y , Metcalf BJ , Gierke R , Mosites E , Chochua S , Pilishvili T .
J Infect Dis 2020 223 (7) 1241-1249 type
Genomic Surveillance of Streptococcus pyogenes Strains Causing Invasive Disease, United States, 2016-2017.
Li Y , Rivers J , Mathis S , Li Z , Velusamy S , Nanduri SA , VanBeneden CA , Snippes-Vagnone P , Lynfield R , McGee L , Chochua S , Metcalf BJ , Beall B .
Front Microbiol 2020 11 1547 type
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