Skip directly to search Skip directly to A to Z list Skip directly to navigation Skip directly to page options Skip directly to site content

CDC-Authored Genomics and Precision Health Publications Database|Home|PHGKB

CDC-Authored Genomics and Precision Health Publications Database


Last data update: Feb 20, 2020. (Total: 2767 publications since 2011)
   dataset
Filtered By:
Records 1-31 (of 31 Records)
Query Trace: all>>William M Switzer[CDC Author]
Phylodynamic Analysis Complements Partner Services by Identifying Acute and Unreported HIV Transmission.
Ellsworth M Campbell, Anne Patala, Anupama Shankar, Jin-Fen Li, Jeffrey A Johnson, Emily Westheimer, Cynthia L Gay, Stephanie E Cohen, William M Switzer, and Philip J Peters
Viruses 2020 Jan (2)
Natural selection favoring more transmissible HIV detected in United States molecular transmission network.
Joel O Wertheim, Alexandra M Oster, William M Switzer, Chenhua Zhang, Nivedha Panneer, Ellsworth Campbell, Neeraja Saduvala, Jeffrey A Johnson, and Walid Heneine
Nature communications 2019 Dec (1) 5788
Simian Foamy Viruses in Central and South America: A New World of Discovery.
André F Santos, Liliane T F Cavalcante, Cláudia P Muniz, William M Switzer, and Marcelo A Soares
Viruses 2019 Oct (10)
Molecular Analysis of the Complete Genome of a Simian Foamy Virus Infecting Hylobates pileatus (pileated gibbon) Reveals Ancient Co-Evolution with Lesser Apes.
Anupama Shankar, Samuel D Sibley, Tony L Goldberg, and William M Switzer
Viruses 2019 Jul (7)
Genome-wide patterns of gene expression in a wild primate indicate species-specific mechanisms associated with tolerance to natural simian immunodeficiency virus infection.
Noah D Simons, Geeta N Eick, Maria J Ruiz-Lopez, David Hyeroba, Patrick A Omeja, Geoffrey Weny, Colin A Chapman, Tony L Goldberg, HaoQiang Zheng, Anupama Shankar, William M Switzer, Simon D W Frost, James H Jones, Kirstin N Sterner, and Nelson Ting
Genome biology and evolution 2019 May
Notes from the Field: HIV Diagnoses Among Persons Who Inject Drugs - Northeastern Massachusetts, 2015-2018.
Kevin Cranston, Charles Alpren, Betsey John, Erica Dawson, Kathleen Roosevelt, Amanda Burrage, Janice Bryant, William M Switzer, Courtney Breen, Philip J Peters, Tracy Stiles, Ashley Murray, H Dawn Fukuda, William Adih, Linda Goldman, Nivedha Panneer, Barry Callis, Ellsworth M Campbell, Liisa Randall, Anne Marie France, R Monina Klevens, Sheryl Lyss, Shauna Onofrey, Christine Agnew-Brune, Michael Goulart, Hongwei Jia, Matthew Tumpney, Paul McClung, Sharoda Dasgupta, Danae Bixler, Kischa Hampton, , Jenifer Leaf Jaeger, Kate Buchacz, and Alfred DeMaria
MMWR. Morbidity and mortality weekly report 2019 Mar (10) 253-254
Clinical and Molecular Features of Feline Foamy Virus and Feline Leukemia Virus Co-Infection in Naturally-Infected Cats.
Liliane T F Cavalcante, Cláudia P Muniz, Hongwei Jia, Anderson M Augusto, Fernando Troccoli, Sheila de O Medeiros, Carlos G A Dias, William M Switzer, Marcelo A Soares, and André F Santos
Viruses 2018 Dec 10(12)
Maintenance and reappearance of extremely divergent intra-host HIV-1 variants.
Joel O Wertheim, Alexandra M Oster, Ben Murrell, Neeraja Saduvala, Walid Heneine, William M Switzer, and Jeffrey A Johnson
Virus evolution 2018 Jul (2) vey030
A large HCV transmission network enabled a fast-growing HIV outbreak in rural Indiana, 2015.
Sumathi Ramachandran, Hong Thai, Joseph C Forbi, Romeo Regi Galang, Zoya Dimitrova, Guo-Liang Xia, Yulin Lin, Lili T Punkova, Pamela R Pontones, Jessica Gentry, Sara J Blosser, Judith Lovchik, William M Switzer, Eyasu Teshale, Philip Peters, John Ward, Yury Khudyakov, and
EBioMedicine 2018 Nov
Identifying Clusters of Recent and Rapid HIV Transmission Through Analysis of Molecular Surveillance Data.
Alexandra M Oster, Anne Marie France, Nivedha Panneer, M Cheryl Bañez Ocfemia, Ellsworth Campbell, Sharoda Dasgupta, William M Switzer, Joel O Wertheim, and Angela L Hernandez
Journal of acquired immune deficiency syndromes (1999) 2018 Dec 79(5) 543-550
Detailed Transmission Network Analysis of a Large Opiate-Driven Outbreak of HIV Infection in the United States.
Ellsworth M Campbell, Hongwei Jia, Anupama Shankar, Debra Hanson, Wei Luo, Silvina Masciotra, S Michele Owen, Alexandra M Oster, Romeo R Galang, Michael W Spiller, Sara J Blosser, Erika Chapman, Jeremy C Roseberry, Jessica Gentry, Pamela Pontones, Joan Duwve, Paula Peyrani, Ron M Kagan, Jeannette M Whitcomb, Philip J Peters, Walid Heneine, John T Brooks, and William M Switzer
The Journal of infectious diseases 2017 Oct
Zoonotic infection of Brazilian primate workers with New World simian foamy virus.
Cláudia P Muniz, Liliane T F Cavalcante, Hongwei Jia, HaoQiang Zheng, Shaohua Tang, Anderson M Augusto, Alcides Pissinatti, Luiz P Fedullo, André F Santos, Marcelo A Soares, and William M Switzer
PloS one 2017 12(9) e0184502
A non-invasive specimen collection method and a novel simian foamy virus (SFV) DNA quantification assay in New World primates reveal aspects of tissue tropism and improved SFV detection.
Cláudia P Muniz, HaoQiang Zheng, Hongwei Jia, Liliane T F Cavalcante, Anderson M Augusto, Luiz P Fedullo, Alcides Pissinatti, Marcelo A Soares, William M Switzer, and André F Santos
PloS one 2017 (9) e0184251
Increasing HIV-1 subtype diversity in seven states, United States, 2006-2013.
Alexandra M Oster, William M Switzer, Angela L Hernandez, Neeraja Saduvala, Joel O Wertheim, Ndidi Nwangwu-Ike, M Cheryl Ocfemia, Ellsworth Campbell, and H Irene Hall
Annals of epidemiology 2017 Feb
Bayesian inference reveals ancient origin of simian foamy virus in orangutans.
Michael J C Reid, William M Switzer, Michael A Schillaci, Amy R Klegarth, Ellsworth Campbell, Manon Ragonnet-Cronin, Isabelle Joanisse, Kyna Caminiti, Carl A Lowenberger, Birute Mary F Galdikas, Hope Hollocher, Paul A Sandstrom, and James I Brooks
Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases 2017 Mar
Development of neurologic diseases in a patient with primate T lymphotropic virus type 1 (PTLV-1).
Yoshimi Enose-Akahata, Breanna Caruso, Benjamin Haner, Emily Charlip, Govind Nair, Raya Massoud, Bridgette J Billioux, Joan Ohayon, William M Switzer, and Steven Jacobson
Retrovirology 13(1) 56
HIV Infection Linked to Injection Use of Oxymorphone in Indiana, 2014-2015.
Philip J Peters, Pamela Pontones, Karen W Hoover, Monita R Patel, Romeo R Galang, Jessica Shields, Sara J Blosser, Michael W Spiller, Brittany Combs, William M Switzer, Caitlin Conrad, Jessica Gentry, Yury Khudyakov, Dorothy Waterhouse, S Michele Owen, Erika Chapman, Jeremy C Roseberry, Veronica McCants, Paul J Weidle, Dita Broz, Taraz Samandari, Jonathan Mermin, Jennifer Walthall, John T Brooks, Joan M Duwve, and
The New England journal of medicine 2016 Jul 375(3) 229-39
Assessing Commitment and Reporting Fidelity to a Text Message-Based Participatory Surveillance in Rural Western Uganda.
James Lester, Sarah Paige, Colin A Chapman, Mhairi Gibson, James Holland Jones, William M Switzer, Nelson Ting, Tony L Goldberg, and Simon D W Frost
PloS one 2016 11(6) e0155971
Detailed phylogenetic analysis of primate T-lymphotropic virus type 1 (PTLV-1) sequences from orangutans (Pongo pygmaeus) reveals new insights into the evolutionary history of PTLV-1 in Asia.
Michael J C Reid, William M Switzer, Michael A Schillaci, Manon Ragonnet-Cronin, Isabelle Joanisse, Kyna Caminiti, Carl A Lowenberger, Birute Mary F Galdikas, Paul A Sandstrom, and James I Brooks
Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases 2016 May
Origin and spread of HIV-1 in persons who inject drugs in Bulgaria.
Ivailo Alexiev, Anupama Shankar, Reneta Dimitrova, Anna Gancheva, Asia Kostadinova, Pavel Teoharov, Elitsa Golkocheva, Maria Nikolova, Mariya Muhtarova, Ivaylo Elenkov, Mariyana Stoycheva, Daniela Nikolova, Tonka Varleva, and William M Switzer
Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases 2016 May
An expanded search for simian foamy viruses (SFV) in Brazilian New World primates identifies novel SFV lineages and host age-related infections.
Cláudia P Muniz, Hongwei Jia, Anupama Shankar, Lian L Troncoso, Anderson M Augusto, Elisabete Farias, Alcides Pissinatti, Luiz P Fedullo, André F Santos, Marcelo A Soares, and William M Switzer
Retrovirology 2015 12(1) 94
A re-evaluation of the origin of hepatitis C virus genotype 2 in West Africa.
Michael A Purdy, Joseph C Forbi, Amanda Sue, Jennifer E Layden, William M Switzer, Ohene K Opare-Sem, Richard O Phillips, and Yury E Khudyakov
J. Gen. Virol. 2015 Aug (8) 2157-64
Genomic resources notes accepted 1 December 2014 - 31 January 2015.
, Simon Blanchet, Olivier Bouchez, Colin A Chapman, Paul D Etter, Tony L Goldberg, Eric A Johnson, James H Jones, Géraldine Loot, Patrick A Omeja, Olivier Rey, Maria Jose Ruiz-Lopez, William M Switzer, and Nelson Ting
Mol Ecol Resour 2015 May 15(3) 684
Discovery of prosimian and afrotherian foamy viruses and potential cross species transmissions amidst stable and ancient mammalian co-evolution.
Aris Katzourakis, Pakorn Aiewsakun, Hongwei Jia, Nathan D Wolfe, Matthew LeBreton, Anne D Yoder, and William M Switzer
Retrovirology 2014 1161
Discovery and full genome characterization of a new SIV lineage infecting red-tailed guenons (Cercopithecus ascanius schmidti) in Kibale National Park, Uganda.
Michael Lauck, William M Switzer, Samuel D Sibley, David Hyeroba, Alex Tumukunde, Geoffrey Weny, Anupama Shankar, Justin M Greene, Adam J Ericsen, HaoQiang Zheng, Nelson Ting, Colin A Chapman, Thomas C Friedrich, Tony L Goldberg, and David H O'Connor
Retrovirology 2014 55
HIV reverse-transcriptase drug resistance mutations during early infection reveal greater transmission diversity than in envelope sequences.
Jonathan T Lipscomb, William M Switzer, Jin-Fen Li, Silvina Masciotra, S Michele Owen, and Jeffrey A Johnson
The Journal of infectious diseases 2014 Dec (11) 1827-37
Intra-host diversity and evolution of hepatitis C virus endemic to Côte d'Ivoire.
Joseph C Forbi, David S Campo, Michael A Purdy, Zoya E Dimitrova, Pavel Skums, Guo-Liang Xia, Lili T Punkova, Lilia M Ganova-Raeva, Gilberto Vaughan, Yousr Ben-Ayed, William M Switzer, and Yury E Khudyakov
J. Med. Virol. 2014 May 86(5) 765-71
Disparate distribution of hepatitis B virus genotypes in four sub-Saharan African countries.
Joseph C Forbi, Yousr Ben-Ayed, Guo-Liang Xia, Gilberto Vaughan, Jan Drobeniuc, William M Switzer, and Yury E Khudyakov
J. Clin. Virol. 2013 Sep 58(1) 59-66
Detailed molecular epidemiologic characterization of HIV-1 infection in Bulgaria reveals broad diversity and evolving phylodynamics.
Ivailo Alexiev Ivanov, Danail Beshkov, Anupama Shankar, Debra L Hanson, Dimitrios Paraskevis, Viara Georgieva, Lyudmila Karamacheva, Hristo Taskov, Tonka Varleva, Ivaylo Elenkov, Mariana Stoicheva, Daniela Nikolova, and William M Switzer
PLoS ONE 2013 8(3) e59666
Human T-cell lymphotropic virus type 3 (HTLV-3)- and HTLV-4-derived antisense transcripts encode proteins with similar Tax-inhibiting functions but distinct subcellular localization.
Émilie Larocque, Marilène Halin, Sébastien Landry, Susan J Marriott, William M Switzer, and Benoit Barbeau
J. Virol. 2011 Dec 85(23) 12673-85
Demographic but not geographic insularity in HIV transmission among young black MSM.
Alexandra M Oster, Danuta Pieniazek, Xinjian Zhang, William M Switzer, Rebecca A Ziebell, Leandro A Mena, Xierong Wei, Kendra L Johnson, Sonita K Singh, Peter E Thomas, Kimberlee A Elmore, and James D Heffelfinger
AIDS 2011 Nov 13. 25(17) 2157-65
TOP