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CDC-Authored Genomics and Precision Health Publications Database|Home|PHGKB

CDC-Authored Genomics and Precision Health Publications Database


Last data update: Oct 05, 2022. (Total: 4039 publications since 2011)
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Records 1-10 (of 10 Records)
Query Trace: all>>Clinton R Paden[CDC Author]
Benchmark datasets for SARS-CoV-2 surveillance bioinformatics.
Lingzi Xiaoli, Jill V Hagey, Daniel J Park, Christopher A Gulvik, Erin L Young, Nabil-Fareed Alikhan, Adrian Lawsin, Norman Hassell, Kristen Knipe, Kelly F Oakeson, Adam C Retchless, Migun Shakya, Chien-Chi Lo, Patrick Chain, Andrew J Page, Benjamin J Metcalf, Michelle Su, Jessica Rowell, Eshaw Vidyaprakash, Clinton R Paden, Andrew D Huang, Dawn Roellig, Ketan Patel, Kathryn Winglee, Michael R Weigand, and Lee S Katz
PeerJ 2022 10e13821
SARS-CoV-2 Delta-Omicron Recombinant Viruses, United States.
Kristine A Lacek, Benjamin L Rambo-Martin, Dhwani Batra, Xiao-Yu Zheng, Norman Hassell, Hitoshi Sakaguchi, Thomas Peacock, Natalie Groves, Matthew Keller, Malania M Wilson, Mili Sheth, Morgan L Davis, Mark Borroughs, Jonathan Gerhart, Samuel S Shepard, Peter W Cook, Justin Lee, David E Wentworth, John R Barnes, Rebecca Kondor, and Clinton R Paden
Emerging infectious diseases 2022 28(7)
Unrecognized introductions of SARS-CoV-2 into the US state of Georgia shaped the early epidemic.
Ahmed Babiker, Michael A Martin, Charles Marvil, Stephanie Bellman, Robert A Petit Iii, Heath L Bradley, Victoria D Stittleburg, Jessica Ingersoll, Colleen S Kraft, Yan Li, Jing Zhang, Clinton R Paden, Timothy D Read, Jesse J Waggoner, Katia Koelle, and Anne Piantadosi
Virus evolution 2022 8(1) veac011
Genomic Surveillance for SARS-CoV-2 Variants: Predominance of the Delta (B.1.617.2) and Omicron (B.1.1.529) Variants - United States, June 2021-January 2022.
Anastasia S Lambrou, Philip Shirk, Molly K Steele, Prabasaj Paul, Clinton R Paden, Betsy Cadwell, Heather E Reese, Yutaka Aoki, Norman Hassell, Xiao-Yu Zheng, Sarah Talarico, Jessica C Chen, M Steven Oberste, Dhwani Batra, Laura K McMullan, Alison Laufer Halpin, Summer E Galloway, Duncan R MacCannell, Rebecca Kondor, John Barnes, Adam MacNeil, Benjamin J Silk, Vivien G Dugan, Heather M Scobie, David E Wentworth, ,
MMWR. Morbidity and mortality weekly report 2022 71(6) 206-211
Isolation and characterization of novel reassortant mammalian orthoreovirus from pigs in the United States.
Liping Wang, Yan Li, Timothy Walsh, Zhenyu Shen, Yonghai Li, Nirmalendu Deb Nath, Jinhwa Lee, Baoliang Zheng, Ying Tao, Clinton R Paden, Krista Queen, Shuping Zhang, Suxiang Tong, and Wenjun Ma
Emerging microbes & infections 2021 1-43
Introduction, Transmission Dynamics, and Fate of Early SARS-CoV-2 Lineages in Santa Clara County, California.
Elsa Villarino, Xianding Deng, Carol A Kemper, Michelle A Jorden, Brandon Bonin, Sarah L Rudman, George S Han, Guixia Yu, Candace Wang, Scot Federman, Brian Bushnell, , Debra A Wadford, Wen Lin, Ying Tao, Clinton R Paden, Julu Bhatnagar, Tara MacCannell, Suxiang Tong, Joshua Batson, and Charles Y Chiu
The Journal of infectious diseases 2021 4 (2) 207-217
Evidence of SARS-CoV-2 Replication and Tropism in the Lungs, Airways and Vascular Endothelium of Patients with Fatal COVID-19: An Autopsy Case-Series.
Julu Bhatnagar, Joy Gary, Sarah Reagan-Steiner, Lindsey B Estetter, Suxiang Tong, Ying Tao, Amy M Denison, Elizabeth Lee, Marlene Deleon-Carnes, Yan Li, Anna Uehara, Clinton R Paden, Brooke Leitgeb, Timothy M Uyeki, Roosecelis B Martines, Jana M Ritter, Christopher D Paddock, Wun-Ju Shieh, and Sherif R Zaki
The Journal of infectious diseases 2021 1 (5) 752-764
Genomic surveillance reveals multiple introductions of SARS-CoV-2 into Northern California.
Xianding Deng, Wei Gu, Scot Federman, Louis du Plessis, Oliver G Pybus, Nuno Faria, Candace Wang, Guixia Yu, Brian Bushnell, Chao-Yang Pan, Hugo Guevara, Alicia Sotomayor-Gonzalez, Kelsey Zorn, Allan Gopez, Venice Servellita, Elaine Hsu, Steve Miller, Trevor Bedford, Alexander L Greninger, Pavitra Roychoudhury, Lea M Starita, Michael Famulare, Helen Y Chu, Jay Shendure, Keith R Jerome, Catie Anderson, Karthik Gangavarapu, Mark Zeller, Emily Spencer, Kristian G Andersen, Duncan MacCannell, Clinton R Paden, Yan Li, Jing Zhang, Suxiang Tong, Gregory Armstrong, Scott Morrow, Matthew Willis, Bela T Matyas, Sundari Mase, Olivia Kasirye, Maggie Park, Godfred Masinde, Curtis Chan, Alexander T Yu, Shua J Chai, Elsa Villarino, Brandon Bonin, Debra A Wadford, and Charles Y Chiu
Science (New York, N.Y.) 2020 6 (6503) 582-587
Isolation and growth characterization of novel full length and deletion mutant human MERS-CoV strains from clinical specimens collected during 2015.
Azaibi Tamin, Krista Queen, Clinton R Paden, Xiaoyan Lu, Erica Andres, Senthilkumar K Sakthivel, Yan Li, Ying Tao, Jing Zhang, Shifaq Kamili, Abdullah M Assiri, Ali Alshareef, Taghreed A Alaifan, Asmaa M Altamimi, Hani Jokhdar, John T Watson, Susan I Gerber, Suxiang Tong, and Natalie J Thornburg
The Journal of general virology 2019 Oct
Scope and extent of healthcare-associated Middle East respiratory syndrome coronavirus transmission during two contemporaneous outbreaks in Riyadh, Saudi Arabia, 2017.
Khalid H Alanazi, Marie E Killerby, Holly M Biggs, Glen R Abedi, Hani Jokhdar, Ali A Alsharef, Mutaz Mohammed, Osman Abdalla, Aref Almari, Samar Bereagesh, Sameh Tawfik, Husain Alresheedi, Raafat F Alhakeem, Ahmed Hakawi, Haitham Alfalah, Hala Amer, Natalie J Thornburg, Azaibi Tamin, Suvang Trivedi, Suxiang Tong, Xiaoyan Lu, Krista Queen, Yan Li, Senthilkumar K Sakthivel, Ying Tao, Jing Zhang, Clinton R Paden, Hail M Al-Abdely, Abdullah M Assiri, Susan I Gerber, and John T Watson
Infection control and hospital epidemiology 2019 Jan (1) 79-88
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