CDC-Authored Genomics and Precision Health Publications Database

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Last data update: Sep 27, 2022. (Total: 4031 publications since 2011)

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Records 1-30 (of 60 Records)

Query Trace: all>>Michael D Bowen[CDC Author]
Rotavirus Strain Trends in United States, 2009-2016: Results from the National Rotavirus Strain Surveillance System (NRSSS). Slavica Mijatovic-Rustempasic, Jose Jaimes, Charity Perkins, M Leanne Ward, Mathew D Esona, Rashi Gautam, Jamie Lewis, Michele Sturgeon, Junaid Panjwani, Gail A Bloom, Steve Miller, Erik Reisdorf, Ann Marie Riley, Morgan A Pence, James Dunn, Rangaraj Selvarangan, Robert C Jerris, Dona Degroat, Umesh D Parashar, Margaret M Cortese, and Michael D Bowen Viruses 2022 14(8) Similar articles in PubMed DOI:10.3390/v14081775
Diversity of rotavirus strains circulating in Haiti before and after introduction of monovalent vaccine. Mentor Ali Ber Lucien, Mathew D Esona, Manise Pierre, Gerard Joseph, Chedelène Rivière, Eyal Leshem, Negar Aliabadi, Anne Marie Desormeaux, Jocelyn Andre-Alboth, David L Fitter, Yoran Grant-Greene, Jacqueline Tate, Jacques Boncy, Roopal Patel, Eleanor Burnett, Stanley Juin, Umesh D Parashar, and Michael D Bowen IJID Regions (Online) 2022 4146-151 Similar articles in PubMed DOI:10.1016/j.ijregi.2022.07.007
Understanding Variation in Rotavirus Vaccine Effectiveness Estimates in the United States: The Role of Rotavirus Activity and Diagnostic Misclassification. Avnika B Amin, Timothy L Lash, Jacqueline E Tate, Lance A Waller, Mary E Wikswo, Umesh D Parashar, Laura S Stewart, James D Chappell, Natasha B Halasa, John V Williams, Marian G Michaels, Robert W Hickey, Eileen J Klein, Janet A Englund, Geoffrey A Weinberg, Peter G Szilagyi, Mary Allen Staat, Monica M McNeal, Julie A Boom, Leila C Sahni, Rangaraj Selvaragan, Christopher J Harrison, Mary E Moffatt, Jennifer E Schuster, Barbara A Pahud, Gina M Weddle, Parvin H Azimi, Samantha H Johnston, Daniel C Payne, Michael D Bowen, and Benjamin A Lopman Epidemiology (Cambridge, Mass.) 2022 Similar articles in PubMed DOI:10.1097/EDE.0000000000001501
Whole genome analysis of rotavirus strains circulating in Benin before vaccine introduction, 2016-2018. Jijoho Michel Agbla, Mathew D Esona, Jose Jaimes, Rashi Gautam, Alidéhou Jerrold Agbankpé, Eric Katz, Tamegnon Victorien Dougnon, Annick Capo-Chichi, Nafissatou Ouedraogo, Osseni Razack, Honoré Sourou Bankolé, and Michael D Bowen Virus research 2022 198715 Similar articles in PubMed DOI:10.1016/j.virusres.2022.198715
Comparative genomic analysis of genogroup 1 and genogroup 2 rotaviruses circulating in seven US cities, 2014-2016. Mathew D Esona, Rashi Gautam, Eric Katz, Jose Jaime, M Leanne Ward, Mary E Wikswo, Naga S Betrapally, Slavica M Rustempasic, Rangaraj Selvarangan, Christopher J Harrison, Julie A Boom, Jan Englund, Eileen J Klein, Mary Allen Staat, Monica M McNeal, Natasha Halasa, James Chappell, Geoffrey A Weinberg, Daniel C Payne, Umesh D Parashar, and Michael D Bowen Virus evolution 2021 7(1) veab023 Similar articles in PubMed DOI:10.1093/ve/veab023
Development of a real-time reverse transcription-PCR assay to detect and quantify group A rotavirus equine-like G3 strains. Eric M Katz, Mathew D Esona, Rashi Gautam, and Michael D Bowen Journal of clinical microbiology 2021 JCM0260220 Similar articles in PubMed DOI:10.1128/JCM.02602-20
Cross-sectional study and genotyping of rotavirus-A infections in ruminants in Kuwait. Nadra-Elwgoud M I Abdou, Qais A H Majeed, Ashraf A Saad, Slavica Mijatovic-Rustempasic, Michael D Bowen, and Attia Samy BMC veterinary research 2021 17(1) 245 Similar articles in PubMed DOI:10.1186/s12917-021-02944-4
Effectiveness of monovalent rotavirus vaccine against hospitalizations due to all rotavirus and equine-like G3P[8] genotypes in Haiti 2014-2019. Eleanor Burnett, Stanley Juin, Mathew D Esona, Anne Marie Desormeaux, Negar Aliabadi, Manise Pierre, Jocelyn Andre-Alboth, Eyal Leshem, Melissa D Etheart, Roopal Patel, Patrick Dely, David Fitter, Gladzdin Jean-Denis, Mireille Kalou, Mark A Katz, Michael D Bowen, Yoran Grant-Greene, Jacques Boncy, Umesh D Parashar, Gerard A Joseph, and Jacqueline E Tate Vaccine 2021 Similar articles in PubMed DOI:10.1016/j.vaccine.2021.06.055
Whole gene analysis of a genotype G29P[6] human rotavirus strain identified in Central African Republic. Virginie Banga-Mingo, Mathew D Esona, Naga S Betrapally, Rashi Gautam, Jose Jaimes, Eric Katz, Diane Waku-Kouomou, Michael D Bowen, and Ionela Gouandjika-Vasilache BMC research notes 2021 14(1) 218 Similar articles in PubMed DOI:10.1186/s13104-021-05634-4
Epidemiologic characteristics associated with SARS-CoV-2 antigen-based test results, rRT-PCR cycle threshold values, subgenomic RNA, and viral culture results from university testing. Laura Ford, Christine Lee, Ian W Pray, Devlin Cole, John Paul Bigouette, Glen R Abedi, Dena Bushman, Miranda J Delahoy, Dustin W Currie, Blake Cherney, Marie Kirby, Geroncio Fajardo, Motria Caudill, Kimberly Langolf, Juliana Kahrs, Tara Zochert, Patrick Kelly, Collin Pitts, Ailam Lim, Nicole Aulik, Azaibi Tamin, Jennifer L Harcourt, Krista Queen, Jing Zhang, Brett Whitaker, Hannah Browne, Magdalena Medrzycki, Patricia Shewmaker, Gaston Bonenfant, Bin Zhou, Jennifer Folster, Bettina Bankamp, Michael D Bowen, Natalie J Thornburg, Kimberly Goffard, Brandi Limbago, Allen Bateman, Jacqueline E Tate, Douglas Gieryn, Hannah L Kirking, Ryan Westergaard, Marie Killerby, and Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2021 4 (6) e1348-e1355 Similar articles in PubMed DOI:10.1093/cid/ciab303
Rotavirus Genotype Trends and Gastrointestinal Pathogen Detection in the United States, 2014-16: Results from the New Vaccine Surveillance Network. Mathew D Esona, M Leanne Ward, Mary E Wikswo, Slavica M Rustempasic, Rashi Gautam, Charity Perkins, Rangaraj Selvarangan, Christopher J Harrison, Julie A Boom, Janet A Englund, Eileen J Klein, Mary Allen Staat, Monica M McNeal, Natasha Halasa, James Chappell, Geoffrey A Weinberg, Daniel C Payne, Umesh D Parashar, and Michael D Bowen The Journal of infectious diseases 2021 Similar articles in PubMed DOI:10.1093/infdis/jiab177
Pediatric Respiratory and Enteric Virus Acquisition and Immunogenesis in US Mothers and Children Aged 0-2: PREVAIL Cohort Study. Ardythe L Morrow, Mary A Staat, Emily A DeFranco, Monica M McNeal, Allison R Cline, Shannon C Conrey, Elizabeth P Schlaudecker, Alexandra M Piasecki, Rachel M Burke, Liang Niu, Aron J Hall, Michael D Bowen, Susan I Gerber, Gayle E Langley, Natalie J Thornburg, Angela P Campbell, Jan Vinjé, Umesh D Parashar, and Daniel C Payne JMIR research protocols 2021 10(2) e22222 Similar articles in PubMed DOI:10.2196/22222
Molecular characteristics of rotavirus genotypes circulating in the south of Benin, 2016-2018. Jijoho Michel Agbla, Mathew D Esona, Alidehou Jerrold Agbankpe, Annick Capo-Chichi, Rashi Gautam, Tamegnon Victorien Dougnon, Osseni Razack, Michael D Bowen, and Honore Sourou Bankole BMC research notes 2020 Oct 13(1) 485 Similar articles in PubMed DOI:10.1186/s13104-020-05332-7
Whole genome and in-silico analyses of G1P[8] rotavirus strains from pre- and post-vaccination periods in Rwanda. Sebotsana Rasebotsa, Peter N Mwangi, Milton T Mogotsi, Saheed Sabiu, Nonkululeko B Magagula, Kebareng Rakau, Jeannine Uwimana, Leon Mutesa, Narcisse Muganga, Didier Murenzi, Lisine Tuyisenge, Jose Jaimes, Mathew D Esona, Michael D Bowen, M Jeffrey Mphahlele, Mapaseka L Seheri, Jason M Mwenda, and Martin M Nyaga Scientific reports 2020 Aug 10(1) 13460 Similar articles in PubMed DOI:10.1038/s41598-020-69973-1
Rotavirus vaccine effectiveness and impact in Uzbekistan, the first country to introduce in central Asia. Umid Eraliev, Renat Latipov, Dilorom Tursunova, Annemarie Wasley, Danni Daniels, Umed Ismoilov, Manzura Akramova, Mehri Sultanova, Dilbar Yuldashova, Bahodir Barakaev, Vazira Mutalova, Laziz Tuychiev, Erkin Musabaev, Said Sharapov, Boris Pleshkov, Dovile Videbaek, Shahin Huseynov, Kamola Safaeva, Slavica Mijatovic-Rustempasic, Michael D Bowen, Umesh D Parashar, and Margaret M Cortese Human vaccines & immunotherapeutics 2020 Aug 1-7 Similar articles in PubMed DOI:10.1080/21645515.2020.1776034
Incidence, etiology, and severity of acute gastroenteritis among prospectively enrolled patients in 4 Veterans Affairs hospitals and outpatient centers, 2016-18. Cristina V Cardemil, Neha Balachandran, Anita Kambhampati, Scott Grytdal, Rebecca M Dahl, Maria C Rodriguez-Barradas, Blanca Vargas, David O Beenhouwer, Karen V Evangelista, Vincent C Marconi, Kathryn L Meagley, Sheldon T Brown, Adrienne Perea, Cynthia Lucero-Obusan, Mark Holodniy, Hannah Browne, Rashi Gautam, Michael D Bowen, Jan Vinjé, Umesh D Parashar, and Aron J Hall Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2020 Jun Similar articles in PubMed DOI:10.1093/cid/ciaa806
One-step multiplex real-time RT-PCR assay for detecting and genotyping wild-type group A rotavirus strains and vaccine strains (Rotarix® and RotaTeq®) in stool samples. Rashi Gautam, Slavica Mijatovic-Rustempasic, Mathew D Esona, Ka Ian Tam, Osbourne Quaye, and Michael D Bowen PeerJ 2016 4e1560 Similar articles in PubMed DOI:10.7717/peerj.1560
Multiplexed one-step RT-PCR VP7 and VP4 genotyping assays for rotaviruses using updated primers. Mathew D Esona, Rashi Gautam, Ka Ian Tam, Alice Williams, Slavica Mijatovic-Rustempasic, and Michael D Bowen Journal of virological methods 2015 Oct 22396-104 Similar articles in PubMed DOI:10.1016/j.jviromet.2015.07.012
Sensitive and specific quantitative detection of rotavirus A by one-step real-time reverse transcription-PCR assay without antecedent double-stranded-RNA denaturation. Slavica Mijatovic-Rustempasic, Ka Ian Tam, Tara K Kerin, Jamie M Lewis, Rashi Gautam, Osbourne Quaye, Jon R Gentsch, and Michael D Bowen Journal of clinical microbiology 2013 Sep 51(9) 3047-54 Similar articles in PubMed DOI:10.1128/JCM.01192-13
Novel NSP1 genotype characterised in an African camel G8P[11] rotavirus strain. Khuzwayo C Jere, Mathew D Esona, Yahia H Ali, Ina Peenze, Sunando Roy, Michael D Bowen, Intisar K Saeed, Abdelmelik I Khalafalla, Martin M Nyaga, Jeffrey Mphahlele, Duncan Steele, and Mapaseka L Seheri Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases 2014 Jan 2158-66 Similar articles in PubMed DOI:10.1016/j.meegid.2013.10.002
Real-time RT-PCR assays to differentiate wild-type group A rotavirus strains from Rotarix(®) and RotaTeq(®) vaccine strains in stool samples. Rashi Gautam, Mathew D Esona, Slavica Mijatovic-Rustempasic, Ka Ian Tam, Jon R Gentsch, and Michael D Bowen Human vaccines & immunotherapeutics 2014 10(3) 767-77 Similar articles in PubMed
Comparative evaluation of commercially available manual and automated nucleic acid extraction methods for rotavirus RNA detection in stools. Mathew D Esona, Sharla McDonald, Shifaq Kamili, Tara Kerin, Rashi Gautam, and Michael D Bowen Journal of virological methods 2013 Dec 194(1-2) 242-9 Similar articles in PubMed DOI:10.1016/j.jviromet.2013.08.023
Two rotavirus outbreaks caused by genotype G2P[4] at large retirement communities: cohort studies. Cristina V Cardemil, Margaret M Cortese, Andrew Medina-Marino, Supriya Jasuja, Rishi Desai, Jessica Leung, Cristina Rodriguez-Hart, Gissela Villarruel, Julia Howland, Osbourne Quaye, Ka Ian Tam, Michael D Bowen, Umesh D Parashar, Susan I Gerber, and Annals of internal medicine 2012 Nov 157(9) 621-31 Similar articles in PubMed DOI:10.7326/0003-4819-157-9-201211060-00006
United States rotavirus strain surveillance from 2005 to 2008: genotype prevalence before and after vaccine introduction. Jennifer J Hull, Elizabeth N Teel, Tara K Kerin, Molly M Freeman, Mathew D Esona, Jon R Gentsch, Margaret M Cortese, Umesh D Parashar, Roger I Glass, Michael D Bowen, and The Pediatric infectious disease journal 2011 Jan 30(1 Suppl) S42-7 Similar articles in PubMed DOI:10.1097/INF.0b013e3181fefd78
Comparison of commercial systems for extraction of nucleic acids from DNA/RNA respiratory pathogens. Genyan Yang, Dean E Erdman, Maja Kodani, John Kools, Michael D Bowen, and Barry S Fields Journal of virological methods 2011 Jan 171(1) 195-9 Similar articles in PubMed DOI:10.1016/j.jviromet.2010.10.024
Outbreak of diarrhoea in piglets caused by novel rotavirus genotype G4P[49] in north-western district of Bangladesh, February 2014. Shamim Sarkar, Mathew Dioh Esona, Rashi Gautam, Christina J Castro, Terry Fei Fan Ng, Warda Haque, Salah Uddin Khan, Mohammad Enayet Hossain, Mohammed Ziaur Rahman, Emily S Gurley, Erin D Kennedy, Michael D Bowen, Umesh D Parashar, and Mustafizur Rahman Transboundary and emerging diseases 2019 Aug Similar articles in PubMed DOI:10.1111/tbed.13343
Distribution of rotavirus genotypes in the post-vaccine introduction era in Ashaiman, Greater Accra Region, Ghana, 2014-2016. Victor Letsa, Susan Damanka, Francis Dennis, Belinda Lartey, George E Armah, Naga Betrapally, Rashi Gautam, Mathew D Esona, Michael D Bowen, and Osbourne Quaye Journal of medical virology 2019 Jul Similar articles in PubMed DOI:10.1002/jmv.25542
Whole-gene analysis of inter-genogroup reassortant rotaviruses from the Dominican Republic: Emergence of equine-like G3 strains and evidence of their reassortment with locally-circulating strains. Eric M Katz, Mathew D Esona, Naga S Betrapally, Lucia A De La Cruz De Leon, Yenny R Neira, Gloria J Rey, and Michael D Bowen Virology 2019 Jun 114-131 Similar articles in PubMed DOI:10.1016/j.virol.2019.06.007
Molecular characterization of a human G20P[28] rotavirus a strain with multiple genes related to bat rotaviruses. Mathew D Esona, Sunando Roy, Kunchala Rungsrisuriyachai, Rashi Gautam, Sandra Hermelijn, Gloria Rey-Benito, and Michael D Bowen Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases 2018 57166-170 Similar articles in PubMed DOI:10.1016/j.meegid.2017.11.025
Emergence of G12 and G9 rotavirus genotypes in the Central African Republic, January 2014 to February 2016. Ulrich Aymard Ekomi Moure, Virginie Banga-Mingo, Jean Chrysostom Gody, Jason M Mwenda, Jean Fandema, Diane Waku-Kouomou, Casimir Manengu, Thomas D'Aquin Koyazegbe, Mathew D Esona, Michael D Bowen, and Ionela Gouandijka-Vasilache BMC research notes 2018 Jan 11(1) 5 Similar articles in PubMed DOI:10.1186/s13104-017-3122-7