CDC-Authored Genomics and Precision Health Publications Database

---

Last data update: Dec 04, 2023. (Total: 4781 publications since 2011)

All Cancer Diabetes Economic Equity Environmental FHH HLBS ID Implementation ND PGx PI Rare RCH dataset

Filtered By: Select to fine-tune your search Year Journal

Records 1-16 (of 16 Records)

Query Trace: all>>Heather A Carleton[CDC Author]
Cronobacter sakazakii Infections in Two Infants Linked to Powdered Infant Formula and Breast Pump Equipment - United States, 2021 and 2022. Haston JC , Miko S , Cope JR , McKeel H , Walters C , Joseph LA , Griswold T , Katz LS , Andjar AA , Tourdot L , Rounds J , Vagnone P , Medus C , Harris J , Geist R , Neises D , Wiggington A , Smith T , Im MS , Wheeler C , Smith P , Carleton HA , Lee CC . MMWR Morb Mortal Wkly Rep 2023 72 (9) 223-226
Genome Sequences from a Reemergence of Vibrio cholerae in Haiti, 2022 Reveal Relatedness to Previously Circulating Strains. Walters C , Chen J , Stroika S , Katz LS , Turnsek M , Compre V , Im MS , Gomez S , McCullough A , Landaverde C , Putney J , Caidi H , Folster J , Carleton HA , Boncy J , Lee CC . J Clin Microbiol 2023 e0014223
Molecular characterization of circulating Salmonella Typhi strains in an urban informal settlement in Kenya. Ochieng C , Chen JC , Osita MP , Katz LS , Griswold T , Omballa V , Ng'eno E , Ouma A , Wamola N , Opiyo C , Achieng L , Munywoki PK , Hendriksen RS , Freeman M , Mikoleit M , Juma B , Bigogo G , Mintz E , Verani JR , Hunsperger E , Carleton HA . PLoS Negl Trop Dis 2022 16 (8) e0010704
The power, potential, benefits, and challenges of implementing high-throughput sequencing in food safety systems. Imanian B , Donaghy J , Jackson T , Gummalla S , Ganesan B , Baker RC , Henderson M , Butler EK , Hong Y , Ring B , Thorp C , Khaksar R , Samadpour M , Lawless KA , MacLaren-Lee I , Carleton HA , Tian R , Zhang W , Wan J . NPJ Sci Food 2022 6 (1) 35
The Use of Whole-Genome Sequencing by the Federal Interagency Collaboration for Genomics for Food and Feed Safety in the United States. Stevens EL , Carleton HA , Beal J , Tillman GE , Lindsey RL , Lauer AC , Pightling A , Jarvis KG , Ottesen A , Ramachandran P , Hintz L , Katz LS , Folster JP , Whichard JM , Trees E , Timme RE , McDermott P , Wolpert B , Bazaco M , Zhao S , Lindley S , Bruce BB , Griffin PM , Brown E , Allard M , Tallent S , Irvin K , Hoffmann M , Wise M , Tauxe R , Gerner-Smidt P , Simmons M , Kissler B , Defibaugh-Chavez S , Klimke W , Agarwala R , Lindsay J , Cook K , Austerman SR , Goldman D , McGarry S , Hale KR , Dessai U , Musser SM , Braden C . J Food Prot 2022 85 (5) 755-772
Evaluating whole-genome sequencing quality metrics for enteric pathogen outbreaks. Wagner DD , Carleton HA , Trees E , Katz LS . PeerJ 2021 9 e12446
Comparison of Molecular Subtyping and Antimicrobial Resistance Detection Methods Used in a Large Multi-State Outbreak of Extensively Drug-Resistant Campylobacter jejuni Infections Linked to Pet Store Puppies. Joseph LA , FrancoisWatkins LK , Chen J , Tagg KA , Bennett C , Caidi H , Folster JP , Laughlin ME , Koski L , Silver R , Stevenson L , Robertson S , Pruckler J , Nichols M , Pouseele H , Carleton HA , Basler C , Friedman CR , Geissler A , Hise KB , Aubert RD . J Clin Microbiol 2020 58 (10)
Pathogen Genomics in Public Health. Armstrong GL , MacCannell DR , Taylor J , Carleton HA , Neuhaus EB , Bradbury RS , Posey JE , Gwinn M . N Engl J Med 2019 381 (26) 2569-2580
Implications of Mobile Genetic Elements for Salmonella enterica Single-Nucleotide Polymorphism Subtyping and Source Tracking Investigations. Li S , Zhang S , Baert L , Jagadeesan B , Ngom-Bru C , Griswold T , Katz LS , Carleton HA , Deng X . Appl Environ Microbiol 2019 85 (24)
PulseNet and the Changing Paradigm of Laboratory-Based Surveillance for Foodborne Diseases. Kubota KA , Wolfgang WJ , Baker DJ , Boxrud D , Turner L , Trees E , Carleton HA , Gerner-Smidt P . Public Health Rep 2019 134 22s-28s
Interpretation of Whole-Genome Sequencing for Enteric Disease Surveillance and Outbreak Investigation. Besser JM , Carleton HA , Trees E , Stroika SG , Hise K , Wise M , Gerner-Smidt P . Foodborne Pathog Dis 2019 16 (7) 504-512
Metagenomic Approaches for Public Health Surveillance of Foodborne Infections: Opportunities and Challenges. Carleton HA , Besser J , Williams-Newkirk AJ , Huang A , Trees E , Gerner-Smidt P . Foodborne Pathog Dis 2019 16 (7) 474-479
Benchmark datasets for phylogenomic pipeline validation, applications for foodborne pathogen surveillance. Timme Ruth E, Rand Hugh, Shumway Martin, Trees Eija K, Simmons Mustafa, Agarwala Richa, Davis Steven, Tillman Glenn E, Defibaugh-Chavez Stephanie, Carleton Heather A, Klimke William A, Katz Lee S. PeerJ 2017 5e3893 . PeerJ 2017 5e3893
An Assessment of Different Genomic Approaches for Inferring Phylogeny of Listeria monocytogenes. Henri C , Leekitcharoenphon P , Carleton HA , Radomski N , Kaas RS , Mariet JF , Felten A , Aarestrup FM , GernerSmidt P , Roussel S , Guillier L , Mistou MY , Hendriksen RS . Front Microbiol 2017 8 2351
A Comparative Analysis of the Lyve-SET Phylogenomics Pipeline for Genomic Epidemiology of Foodborne Pathogens. Katz Lee S, Griswold Taylor, Williams-Newkirk Amanda J, Wagner Darlene, Petkau Aaron, Sieffert Cameron, Van Domselaar Gary, Deng Xiangyu, Carleton Heather A.Frontiers in microbiology 2017 375 . Frontiers in microbiology 2017 375
Implementation of Whole Genome Sequencing (WGS) for Identification and Characterization of Shiga Toxin-Producing Escherichia coli (STEC) in the United States. Lindsey Rebecca L, Pouseele Hannes, Chen Jessica C, Strockbine Nancy A, Carleton Heather A.Frontiers in microbiology 2016 766 . Frontiers in microbiology 2016 766