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CDC-Authored Genomics and Precision Health Publications Database|Home|PHGKB

CDC-Authored Genomics and Precision Health Publications Database


Last data update: Jan 27, 2023. (Total: 4182 publications since 2011)
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Records 1-30 (of 35 Records)
Query Trace: all>>Adam C Retchless[CDC Author]
One Health Investigation of SARS-CoV-2 in People and Animals on Multiple Mink Farms in Utah.
Caitlin M Cossaboom, Natalie M Wendling, Nathaniel M Lewis, Hannah Rettler, Robert R Harvey, Brian R Amman, Jonathan S Towner, Jessica R Spengler, Robert Erickson, Cindy Burnett, Erin L Young, Kelly Oakeson, Ann Carpenter, Markus H Kainulainen, Payel Chatterjee, Mike Flint, Anna Uehara, Yan Li, Jing Zhang, Anna Kelleher, Brian Lynch, Adam C Retchless, Suxiang Tong, Ausaf Ahmad, Paige Bunkley, Claire Godino, Owen Herzegh, Jan Drobeniuc, Jane Rooney, Dean Taylor, and Casey Barton Behravesh
Viruses 2023 15(1)
Benchmark datasets for SARS-CoV-2 surveillance bioinformatics.
Lingzi Xiaoli, Jill V Hagey, Daniel J Park, Christopher A Gulvik, Erin L Young, Nabil-Fareed Alikhan, Adrian Lawsin, Norman Hassell, Kristen Knipe, Kelly F Oakeson, Adam C Retchless, Migun Shakya, Chien-Chi Lo, Patrick Chain, Andrew J Page, Benjamin J Metcalf, Michelle Su, Jessica Rowell, Eshaw Vidyaprakash, Clinton R Paden, Andrew D Huang, Dawn Roellig, Ketan Patel, Kathryn Winglee, Michael R Weigand, and Lee S Katz
PeerJ 2022 10e13821
Antimicrobial Susceptibility Survey of Invasive Haemophilus influenzae in the United States in 2016.
Caelin C Potts, Lorraine D Rodriguez-Rivera, Adam C Retchless, Sean A Buono, Alexander T Chen, Henju Marjuki, Amy E Blain, and Xin Wang
Microbiology spectrum 2022 e0257921
Household Transmission and Symptomology of SARS-CoV-2 Alpha Variant Among Children-California and Colorado, 2021.
Michelle A Waltenburg, Melissa J Whaley, Rebecca J Chancey, Marisa A P Donnelly, Meagan R Chuey, Raymond Soto, Noah G Schwartz, Victoria T Chu, Sadia Sleweon, David W McCormick, Anna Uehara, Adam C Retchless, Suxiang Tong, Jennifer M Folster, Marla Petway, Natalie J Thornburg, Jan Drobeniuc, Brett Austin, Meghan M Hudziec, Ginger Stringer, Bernadette A Albanese, S E Totten, Shannon R Matzinger, J Erin Staples, Marie E Killerby, Laura J Hughes, Almea Matanock, Mark Beatty, Jacqueline E Tate, Hannah L Kirking, Christopher H Hsu, and
The Journal of pediatrics 2022
Transmission of SARS-CoV-2 Delta variant (B.1.617.2) from a fully vaccinated human to a canine in Georgia, July 2021.
Natalie M Wendling, Ann Carpenter, Amanda Liew, Ria R Ghai, Nadia Gallardo-Romero, Robyn A Stoddard, Ying Tao, Jing Zhang, Adam C Retchless, Ausaf Ahmad, Paige Bunkley, Claire Godino, Matthew R Mauldin, Kate Varela, Jana M Ritter, Janemarie Hennebelle, Amanda Feldpausch, Julie Gabel, Markus H Kainulainen, Owen Herzegh, Suxiang Tong, Jessica R Spengler, and Casey Barton Behravesh
Zoonoses and public health 2022
Antimicrobial Susceptibility Survey of Invasive Neisseria meningitidis, United States 2012-2016.
Caelin C Potts, Lorraine D Rodriguez-Rivera, Adam C Retchless, Fang Hu, Henju Marjuki, Amy E Blain, Lucy A McNamara, and Xin Wang
The Journal of infectious diseases 2022
Genomic Insights on Variation Underlying Capsule Expression in Meningococcal Carriage Isolates From University Students, United States, 2015-2016.
Melissa J Whaley, Jeni T Vuong, Nadav Topaz, How-Yi Chang, Jennifer Dolan Thomas, Laurel T Jenkins, Fang Hu, Susanna Schmink, Evelene Steward-Clark, Marsenia Mathis, Lorraine D Rodriguez-Rivera, Adam C Retchless, Sandeep J Joseph, Alexander Chen, Anna M Acosta, Lucy McNamara, Heidi M Soeters, Sarah Mbaeyi, Henju Marjuki, and Xin Wang
Frontiers in microbiology 2022 13815044
Household transmission of SARS-CoV-2 Alpha variant - United States, 2021.
Marisa A P Donnelly, Meagan R Chuey, Raymond Soto, Noah G Schwartz, Victoria T Chu, Stacey L Konkle, Sadia Sleweon, Jasmine Ruffin, Dana L Haberling, Sarah Anne J Guagliardo, Robyn A Stoddard, Raydel D Anderson, Clint N Morgan, Rebecca Rossetti, David W McCormick, Reed Magleby, Sarah W Sheldon, Elizabeth A Dietrich, Anna Uehara, Adam C Retchless, Suxiang Tong, Jennifer M Folster, Jan Drobeniuc, Marla E Petway, Brett Austin, Sarah Stous, Eric McDonald, Seema Jain, Meghan M Hudziec, Ginger Stringer, Bernadette A Albanese, Sarah E Totten, J Erin Staples, Marie E Killerby, Laura Hughes, Almea Matanock, Mark Beatty, Jacqueline E Tate, Hannah L Kirking, Christopher H Hsu, and
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2022
Evaluation of urethrotropic clade meningococcal infection by urine metagenomic shotgun sequencing.
Adam C Retchless, Mark Itsko, Jose A Bazan, Abigail Norris Turner, Fang Hu, Sandeep J Joseph, Alexandria Carter, Morgan Brown, Brandon Snyder, and Xin Wang
Journal of clinical microbiology 2021 JCM0173221
Infection With the US Neisseria meningitidis Urethritis Clade Does Not Lower Future Risk of Urethral Gonorrhea.
Abigail Norris Turner, Alexandria M Carter, Yih-Ling Tzeng, David S Stephens, Morgan A Brown, Brandon M Snyder, Adam C Retchless, Xin Wang, and Jose A Bazan
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2021 74(12) 2159-2165
Genetic Diversity of Meningococcal Serogroup B Vaccine Antigens among Carriage Isolates Collected from Students at Three Universities in the United States, 2015-2016.
Henju Marjuki, How-Yi Chang, Nadav Topaz, Melissa J Whaley, Jeni Vuong, Alexander Chen, Laurel T Jenkins, Fang Hu, Susanna Schmink, Adam C Retchless, Jennifer D Thomas, Anna M Acosta, Lucy A McNamara, Heidi M Soeters, Sarah Mbaeyi, and Xin Wang
mBio 2021 12(3)
Using Neisseria meningitidis genomic diversity to inform outbreak strain identification.
Adam C Retchless, Alex Chen, How-Yi Chang, Amy E Blain, Lucy A McNamara, Mustapha M Mustapha, Lee H Harrison, and Xin Wang
PLoS pathogens 2021 17(5) e1009586
Acquisition of ciprofloxacin resistance among an expanding clade of β-lactamase positive, serogroup Y Neisseria meningitidis in the United States.
Caelin C Potts, Adam C Retchless, Lucy A McNamara, Daya Marasini, Natashia Reese, Stephanie Swint, Fang Hu, Shalabh Sharma, Amy E Blain, David Lonsway, Maria Karlsson, Susan Hariri, LeAnne M Fox, Xin Wang, and
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2021
Web-Based Genome Analysis of Bacterial Meningitis Pathogens for Public Health Applications Using the Bacterial Meningitis Genomic Analysis Platform (BMGAP).
Sean A Buono, Reagan J Kelly, Nadav Topaz, Adam C Retchless, Hideky Silva, Alexander Chen, Edward Ramos, Gregory Doho, Agha Nabeel Khan, Margaret A Okomo-Adhiambo, Fang Hu, Daya Marasini, and Xin Wang
Frontiers in genetics 2020 11601870
Full Molecular Typing of Neisseria meningitidis Directly from Clinical Specimens for Outbreak Investigation.
Mark Itsko, Adam C Retchless, Sandeep J Joseph, Abigail Norris Turner, Jose A Bazan, Adodo Yao Sadji, Rasmata Ouédraogo-Traoré, and Xin Wang
Journal of clinical microbiology 2020 Sep
Detection of Ciprofloxacin-Resistant, β-Lactamase-Producing Neisseria meningitidis Serogroup Y Isolates - United States, 2019-2020.
Lucy A McNamara, Caelin Potts, Amy E Blain, Adam C Retchless, Natashia Reese, Stephanie Swint, David Lonsway, Maria Karlsson, Kristy Lunquest, John J Sweitzer, Xin Wang, Susan Hariri, LeAnne M Fox, and
MMWR. Morbidity and mortality weekly report 2020 Jun 69(24) 735-739
Carriage of Neisseria meningitidis in men who have sex with men presenting to public sexual health clinics, New York City.
Stephanie Ngai, Don Weiss, Julie Anne Bell, Difaa Majrud, Greicy Zayas, Addie Crawley, John Kornblum, Lorraine D Rodriguez-Rivera, Tammy Quinlan, Tanya A Halse, Adam C Retchless, Jessica MacNeil, and Preeti Pathela
Sexually transmitted diseases 2020 Jun
A New Sequence Type of Neisseria meningitidis Serogroup C Associated With a 2016 Meningitis Outbreak in Mali.
Yibayiri Osee Sanogo, Ibréhima Guindo, Seydou Diarra, Adam C Retchless, Mahamadou Abdou, Souleymane Coulibaly, Mahamadou Farka Maiga, Mama Coumaré, Bakary Diarra, Alexander Chen, How-Yi Chang, Jeni T Vuong, Anna M Acosta, Samba Sow, Ryan T Novak, and Xin Wang
The Journal of infectious diseases 2019 Oct 220(Supplement_4) S190-S197
Toward a Global Genomic Epidemiology of Meningococcal Disease.
Adam C Retchless, LeAnne M Fox, Martin C J Maiden, Vincent Smith, Lee H Harrison, Linda Glennie, Odile B Harrison, and Xin Wang
The Journal of infectious diseases 2019 Oct 220(Supplement_4) S266-S273
Genomic characterization of Haemophilus influenzae: a focus on the capsule locus.
Caelin C Potts, Nadav Topaz, Lorraine D Rodriguez-Rivera, Fang Hu, How-Yi Chang, Melissa J Whaley, Susanna Schmink, Adam C Retchless, Alexander Chen, Edward Ramos, Gregory H Doho, and Xin Wang
BMC genomics 2019 Oct (1) 733
Distribution of Neisseria meningitidis serogroup B (NmB) vaccine antigens in meningococcal disease causing isolates in the United States during 2009-2014, prior to NmB vaccine licensure.
How-Yi Chang, Jeni Vuong, Fang Hu, Paul Liberator, Alex Chen, Cecilia B Kretz, Amy Blain, Li Hao, Adam C Retchless, Melissa J Whaley, Annaliesa S Anderson, and Xin Wang
The Journal of infection 2019 Sep
Patterns of inter- and intrasubspecific homologous recombination inform eco-evolutionary dynamics of Xylella fastidiosa.
Neha Potnis, Prem P Kandel, Marcus V Merfa, Adam C Retchless, Jennifer K Parker, Drake C Stenger, Rodrigo P P Almeida, Maria Bergsma-Vlami, Marcel Westenberg, Paul A Cobine, and Leonardo De La Fuente
The ISME journal 2019 May
Genomic diversity and recombination among Xylella fastidiosa subspecies.
Mathieu Vanhove, Adam C Retchless, Anne Sicard, Adrien Rieux, Helvecio D Coletta-Filho, Leonardo De La Fuente, Drake C Stenger, and Rodrigo P P Almeida
Applied and environmental microbiology 2019 Apr
Whole genome sequencing to characterize capsule locus and predict serogroup of invasive meningococcal isolates.
Henju Marjuki, Nadav Topaz, Lorraine D Rodriguez-Rivera, Edward Ramos, Caelin C Potts, Alexander Chen, Adam C Retchless, Gregory H Doho, and Xin Wang
Journal of clinical microbiology 2018 Dec
Whole genome sequencing for investigations of meningococcal outbreaks in the United States: a retrospective analysis.
Melissa J Whaley, Sandeep J Joseph, Adam C Retchless, Cecilia B Kretz, Amy Blain, Fang Hu, How-Yi Chang, Sarah A Mbaeyi, Jessica R MacNeil, Timothy D Read, and Xin Wang
Scientific reports 2018 Oct (1) 15803
Outbreak of Neisseria meningitidis serogroup C outside the meningitis belt-Liberia, 2017: an epidemiological and laboratory investigation.
Catherine H Bozio, Jeni Vuong, E Kainne Dokubo, Mosoka P Fallah, Lucy A McNamara, Caelin C Potts, John Doedeh, Miatta Gbanya, Adam C Retchless, Jaymin C Patel, Thomas A Clark, Henry Kohar, Thomas Nagbe, Peter Clement, Victoria Katawera, Nuha Mahmoud, Harouna M Djingarey, Anne Perrocheau, Dhamari Naidoo, Mardia Stone, Roseline N George, Desmond Williams, Alex Gasasira, Tolbert Nyenswah, Xin Wang, LeAnne M Fox, and
The Lancet. Infectious diseases 2018 Oct
Heteroresistance to the model antimicrobial peptide polymyxin B in the emerging Neisseria meningitidis linage11.2 urethritis clade: mutations in the pilMNOPQ operon.
Yih-Ling Tzeng, Zachary Berman, Evelyn Toh, Jose A Bazan, Abigail Norris Turner, Adam C Retchless, Xin Wang, David E Nelson, and David S Stephens
Molecular microbiology 2018 Oct
BMScan: using whole genome similarity to rapidly and accurately identify bacterial meningitis causing species.
Nadav Topaz, Dave Boxrud, Adam C Retchless, Megan Nichols, How-Yi Chang, Fang Hu, and Xin Wang
BMC infectious diseases 2018 Aug (1) 405
Molecular characterization of invasive meningococcal isolates in Burkina Faso as the relative importance of serogroups X and W increases, 2008-2012.
Adam C Retchless, Malika Congo-Ouédraogo, Dinanibè Kambiré, Jeni Vuong, Alex Chen, Fang Hu, Absetou Ky Ba, Abdoul-Salam Ouédraogo, Soumeya Hema-Ouangraoua, Jaymin C Patel, Rasmata Ouédraogo Traoré, Lassana Sangaré, and Xin Wang
BMC infectious diseases 2018 Jul (1) 337
Expansion of a urethritis-associated Neisseria meningitidis clade in the United States with concurrent acquisition of N. gonorrhoeae alleles.
Adam C Retchless, Cécilia B Kretz, How-Yi Chang, Jose A Bazan, A Jeanine Abrams, Abigail Norris Turner, Laurel T Jenkins, David L Trees, Yih-Ling Tzeng, David S Stephens, Jessica R MacNeil, and Xin Wang
BMC genomics 2018 03 (1) 176
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