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CDC-Authored Genomics and Precision Health Publications Database|Home|PHGKB

CDC-Authored Genomics and Precision Health Publications Database


Last data update: Oct 23, 2020. (Total: 2984 publications since 2011)
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Records 1-30 (of 68 Records)
Query Trace: all>>Venkatachalam Udhayakumar[CDC Author]
Establishing a National Molecular Surveillance Program for the Detection of Plasmodium falciparum Markers of Resistance to Antimalarial Drugs in Haiti.
Karen E S Hamre, Baby Pierre, Ruth Namuyinga, Kimberly Mace, Eric W Rogier, Venkatachalam Udhayakumar, Jacques Boncy, Jean Frantz Lemoine, and Michelle A Chang
The American journal of tropical medicine and hygiene 2020 Sep
Assessment of molecular markers of anti-malarial drug resistance among children participating in a therapeutic efficacy study in western Kenya.
Winnie Chebore, Zhiyong Zhou, Nelli Westercamp, Kephas Otieno, Ya Ping Shi, Sheila B Sergent, Kelsey Anne Rondini, Samaly Souza Svigel, Benard Guyah, Venkatachalam Udhayakumar, Eric S Halsey, Aaron M Samuels, and Simon Kariuki
Malaria journal 2020 Aug 19(1) 291
Molecular and epidemiological characterization of imported malaria cases in Chile.
Daniel F Escobar, Naomi W Lucchi, Rispah Abdallah, María Teresa Valenzuela, Venkatachalam Udhayakumar, María Isabel Jercic, and Stella M Chenet
Malaria journal 2020 Aug 19(1) 289
Combination of Serological, Antigen Detection, and DNA Data for Plasmodium falciparum Provides Robust Geospatial Estimates for Malaria Transmission in Haiti.
Adan Oviedo, Alaine Knipes, Caitlin Worrell, LeAnne M Fox, Luccene Desir, Carl Fayette, Alain Javel, Franck Monestime, Kimberly Mace, Michelle A Chang, Venkatachalam Udhayakumar, Jean F Lemoine, Kimberly Won, Patrick J Lammie, and Eric Rogier
Scientific reports 2020 May 10(1) 8443
Local emergence in Amazonia of Plasmodium falciparum k13 C580Y mutants associated with in vitro artemisinin resistance.
Luana C Mathieu, Horace Cox, Angela M Early, Sachel Mok, Yassamine Lazrek, Jeanne-Celeste Paquet, Maria-Paz Ade, Naomi W Lucchi, Quacy Grant, Venkatachalam Udhayakumar, Jean Sf Alexandre, Magalie Demar, Pascal Ringwald, Daniel E Neafsey, David A Fidock, and Lise Musset
eLife 2020 May
Spatio-temporal dynamics of Plasmodium falciparum transmission within a spatial unit on the Colombian Pacific Coast.
Angélica Knudson, Felipe González-Casabianca, Alejandro Feged-Rivadeneira, Maria Fernanda Pedreros, Samanda Aponte, Adriana Olaya, Carlos F Castillo, Elvira Mancilla, Anderson Piamba-Dorado, Ricardo Sanchez-Pedraza, Myriam Janeth Salazar-Terreros, Naomi Lucchi, Venkatachalam Udhayakumar, Chris Jacob, Alena Pance, Manuela Carrasquilla, Giovanni Apráez, Jairo Andrés Angel, Julian C Rayner, and Vladimir Corredor
Scientific reports 2020 Feb 10(1) 3756
Molecular Surveillance for Polymorphisms Associated with artemisinin-based combination therapie Resistance in Plasmodium falciparum Isolates Collected in the State of Roraima, Brazil.
Naomi W Lucchi, Rispah Abdallah, Jaime Louzada, Venkatachalam Udhayakumar, and Joseli Oliveira-Ferreira
The American journal of tropical medicine and hygiene 2019 Dec
Multiplex malaria antigen detection by bead-based assay and molecular confirmation by PCR shows no evidence of Pfhrp2 and Pfhrp3 deletion in Haiti.
Camelia Herman, Curtis S Huber, Sophie Jones, Laura Steinhardt, Mateusz M Plucinski, Jean F Lemoine, Michelle Chang, John W Barnwell, Venkatachalam Udhayakumar, and Eric Rogier
Malaria journal 2019 Nov (1) 380
Evolution and genetic diversity of the k13 gene associated with artemisinin delayed parasite clearance in Plasmodium falciparum .
M Andreína Pacheco, Esha R Kadakia, Zainab Chaudhary, Douglas J Perkins, Julia Kelley, Shashidhar Ravishankar, Michael Cranfield, Eldin Talundzic, Venkatachalam Udhayakumar, and Ananias A Escalante
Antimicrobial agents and chemotherapy 2019 May
Using the Plasmodium mitochondrial genome for classifying mixed-species infections and inferring the geographical origin of P. falciparum parasites imported to the U.S.
Sarah E Schmedes, Dhruviben Patel, Julia Kelley, Venkatachalam Udhayakumar, and Eldin Talundzic
PloS one 2019 (4) e0215754
Efficacy and safety of artemether-lumefantrine for the treatment of uncomplicated malaria and prevalence of Pfk13 and Pfmdr1 polymorphisms after a decade of using artemisinin-based combination therapy in mainland Tanzania.
Deus S Ishengoma, Celine I Mandara, Filbert Francis, Eldin Talundzic, Naomi W Lucchi, Billy Ngasala, Abdunoor M Kabanywanyi, Muhidin K Mahende, Erasmus Kamugisha, Reginald A Kavishe, Florida Muro, Ally Mohamed, Renata Mandike, Sigsbert Mkude, Frank Chacky, Lynn Paxton, George Greer, Chonge A Kitojo, Ritha Njau, Troy Martin, Meera Venkatesan, Marian Warsame, Eric S Halsey, and Venkatachalam Udhayakumar
Malaria journal 2019 Mar (1) 88
Screening for Pfhrp2/3-Deleted Plasmodium falciparum, Non-falciparum, and Low-Density Malaria Infections by a Multiplex Antigen Assay.
Mateusz M Plucinski, Camelia Herman, Sophie Jones, Rafael Dimbu, Filomeno Fortes, Dragan Ljolje, Naomi Lucchi, Sean C Murphy, Nahum T Smith, Kurtis R Cruz, Annette M Seilie, Eric S Halsey, Venkatachalam Udhayakumar, Michael Aidoo, and Eric Rogier
The Journal of infectious diseases 2018 Sep
Field evaluation of a real time loop-mediated isothermal amplification assay (RealAmp) for malaria diagnosis in Cruzeiro do Sul, Acre, Brazil.
Giselle Maria Rachid Viana, Luciana Silva-Flannery, Danielle Regina Lima Barbosa, Naomi Lucchi, Suiane Costa Negreiros do Valle, Samela Farias, Nayara Barbalho, Paola Marchesini, Juliana Chedid Nogaredi Rossi, Venkatachalam Udhayakumar, Marinete Marins Póvoa, and Alexandre Macedo de Oliveira
PloS one 2018 (7) e0200492
PET-PCR for Detection of Plasmodium falciparum Plasmepsin 2 G ene copy number.
Samaly Santos Souza, Mariangela L'Episcopia, Carlo Severini, Venkatachalam Udhayakumar, and Naomi W Lucchi
Antimicrobial agents and chemotherapy 2018 Jun
Efficacy and safety of artemether-lumefantrine, artesunate-amodiaquine, and dihydroartemisinin-piperaquine for the treatment of uncomplicated Plasmodium falciparum malaria in three provinces in Angola, 2017.
Elizabeth Davlantes, Pedro Rafael Dimbu, Carolina Miguel Ferreira, Maria Florinda Joao, Dilunvuidi Pode, Jacinto Félix, Edgar Sanhangala, Benjamin Nieto Andrade, Samaly Dos Santos Souza, Eldin Talundzic, Venkatachalam Udhayakumar, Chantelle Owens, Eliane Mbounga, Lubbe Wiesner, Eric S Halsey, José Franco Martins, Filomeno Fortes, and Mateusz M Plucinski
Malaria journal 2018 Apr 17(1) 144
Major Threat to Malaria Control Programs by Plasmodium falciparum Lacking Histidine-Rich Protein 2, Eritrea.
Araia Berhane, Karen Anderson, Selam Mihreteab, Karryn Gresty, Eric Rogier, Salih Mohamed, Filmon Hagos, Ghirmay Embaye, Anderson Chinorumba, Assefash Zehaie, Simone Dowd, Norman C Waters, Michelle L Gatton, Venkatachalam Udhayakumar, Qin Cheng, and Jane Cunningham
Emerging infectious diseases 2018 Mar (3) 462-470
Prevalence of molecular markers of artemisinin and lumefantrine resistance among patients with uncomplicated Plasmodium falciparum malaria in three provinces in Angola, 2015.
Dragan Ljolje, Pedro Rafael Dimbu, Julia Kelley, Ira Goldman, Douglas Nace, Aleixo Macaia, Eric S Halsey, Pascal Ringwald, Filomeno Fortes, Venkatachalam Udhayakumar, Eldin Talundzic, Naomi W Lucchi, and Mateusz M Plucinski
Malaria journal 2018 Feb (1) 84
A next-generation sequencing and bioinformatics protocol for Malaria drug Resistance marker Surveillance (MaRS).
Eldin Talundzic, Shashidhar Ravishankar, Julia Kelley, Dhruviben Patel, Mateusz Plucinski, Sarah Schmedes, Dragan Ljolje, Brooke Clemons, Susan Madison-Antenucci, Paul M Arguin, Naomi W Lucchi, Fredrik Vannberg, and Venkatachalam Udhayakumar
Antimicrobial agents and chemotherapy 2018 Feb
The emergence and spread of kelch 13 mutations associated with artemisinin resistance in Plasmodium falciparum parasites in twelve Thai provinces from 2007 - 2016.
Theerayot Kobasa, Eldin Talundzic, Rungniran Sug-Aram, Patcharida Boondat, Ira F Goldman, Naomi W Lucchi, Pratin Dharmarak, David Sintasath, Mark Fukuda, Toni Whistler, John MacArthur, Venkatachalam Udhayakumar, Preecha Prempree, and Nipon Chinanonwait
Antimicrobial agents and chemotherapy 2018 Jan
Expanding the malaria molecular diagnostic options: opportunities and challenges for loop-mediated isothermal amplification tests for malaria control and elimination.
Naomi W Lucchi, Daouda Ndiaye, Sumudu Britton, and Venkatachalam Udhayakumar
Expert review of molecular diagnostics 2018 Jan
Molecular Characterization of a Cluster of Imported Malaria Cases in Puerto Rico.
Stella M Chenet, Luciana Silva-Flannery, Naomi W Lucchi, Ljolje Dragan, Emilio Dirlikov, Kimberly Mace, Brenda Rivera-García, Paul M Arguin, and Venkatachalam Udhayakumar
The American journal of tropical medicine and hygiene 2017 Jul
Molecular diagnosis of Plasmodium ovale by photo-induced electron transfer fluorogenic primers: PET-PCR.
David Akerele, Dragan Ljolje, Eldin Talundzic, Venkatachalam Udhayakumar, and Naomi W Lucchi
PloS one 2017 12(6) e0179178
Sequence variation in Plasmodium falciparum Histidine Rich Proteins 2 and 3 in Indian isolates: Implications for Malaria Rapid Diagnostic Test Performance.
Praveen Kumar Bharti, Himanshu Singh Chandel, Sri Krishna, Shrikant Nema, Amreen Ahmad, Venkatachalam Udhayakumar, and Neeru Singh
Scientific reports 2017 7(1) 1308
Molecular profile of malaria drug resistance markers of Plasmodium falciparum in Suriname.
Stella M Chenet, Sheila Akinyi Okoth, Julia Kelley, Naomi Lucchi, Curtis S Huber, Stephen Vreden, Alexandre Macedo de Oliveira, John W Barnwell, Venkatachalam Udhayakumar, and Malti R Adhin
Antimicrobial agents and chemotherapy 2017 Apr
Histidine-rich protein 2 (pfhrp2) and pfhrp3 gene deletions in Plasmodium falciparum isolates from select sites in Brazil and Bolivia.
Giselle Maria Rachid Viana, Sheila Akinyi Okoth, Luciana Silva-Flannery, Danielle Regina Lima Barbosa, Alexandre Macedo de Oliveira, Ira F Goldman, Lindsay C Morton, Curtis Huber, Arletta Anez, Ricardo Luiz Dantas Machado, Luís Marcelo Aranha Camargo, Suiane Costa Negreiros do Valle, Marinete Marins Póvoa, Venkatachalam Udhayakumar, and John W Barnwell
PloS one 2017 12(3) e0171150
First Full Draft Genome Sequence of Plasmodium brasilianum.
Eldin Talundzic, Shashidhar Ravishankar, Vishal Nayak, Dhruviben S Patel, Christian Olsen, Mili Sheth, Dhwani Batra, Vladimir Loparev, Fredrik O Vannberg, Venkatachalam Udhayakumar, and John W Barnwell
Genome announcements 2017 Feb (6)
Efficacy of artemether-lumefantrine, artesunate-amodiaquine, and dihydroartemisinin-piperaquine for treatment of uncomplicated Plasmodium falciparum malaria in Angola, 2015.
Mateusz M Plucinski, Pedro Rafael Dimbu, Aleixo Panzo Macaia, Carolina Miguel Ferreira, Claudete Samutondo, Joltim Quivinja, Marília Afonso, Richard Kiniffo, Eliane Mbounga, Julia S Kelley, Dhruviben S Patel, Yun He, Eldin Talundzic, Denise O Garrett, Eric S Halsey, Venkatachalam Udhayakumar, Pascal Ringwald, and Filomeno Fortes
Malaria journal 2017 Feb 16(1) 62
The molecular epidemiology of Pf k13 mutations in Senegal using targeted amplicon deep sequencing.
Eldin Talundzic, Yaye D Ndiaye, Awa B Deme, Christian Olsen, Dhruviben S Patel, Shweta Biliya, Rachel Daniels, Fredrik O Vannberg, Sarah K Volkman, Venkatachalam Udhayakumar, and Daouda Ndiaye
Antimicrobial agents and chemotherapy 2017 Jan
Evaluation of the Illumigene Malaria LAMP: A Robust Molecular Diagnostic Tool for Malaria Parasites.
Naomi W Lucchi, Marie Gaye, Mammadou Alpha Diallo, Ira F Goldman, Dragan Ljolje, Awa Bineta Deme, Aida Badiane, Yaye Die Ndiaye, John W Barnwell, Venkatachalam Udhayakumar, and Daouda Ndiaye
Scientific reports 2016 Nov 36808
Genetic Characterisation of Plasmodium falciparum Isolates with Deletion of the pfhrp2 and/or pfhrp3 Genes in Colombia: The Amazon Region, a Challenge for Malaria Diagnosis and Control.
Erika Jimena Dorado, Sheila Akinyi Okoth, Lidia Madeline Montenegro, Gustavo Diaz, John W Barnwell, Venkatachalam Udhayakumar, and Claribel Murillo Solano
PloS one 2016 (9) e0163137
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