Advanced Molecular Detection Clips Content (Published on 12/01/2022)
NEWS
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Happy Birthday, Omicron One year after the variant’s discovery, virologists are still scrambling to keep up with Omicron’s rapid evolution.
Zimmer C. New York Times, Nov 26, 2022. -
mRNA revolutionized the race for a Covid-19 vaccine. Could cancer be next?
Wosen J. STAT, Nov 21, 2022. -
Coronavirus variants are dodging antibody treatments. New lab-made options may help.
Johnson M. Washington Post, Nov 21, 2022. -
Experimental flu vaccine, developed using mRNA, seen as potential game changer
Branswell H. STAT, Nov 24, 2022. -
UCLA Team Uses Magnets, Microfluidics to Create Handheld Molecular Dx System
Ketchum K. GenomeWeb, Nov 18, 2022. -
Mosquito blood meals reveal history of human infections
Mallapaty S. Nature, Nov 25, 2022. -
Scientists Revive 48,500-Year-Old ‘Zombie Virus’ Buried in Ice
Wei LD. Bloomberg, Nov 29, 2022.
CONCEPTS / COMMENTS
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Ten simple rules for funding scientific open source software.
Strasser Carly et al. PLoS computational biology 2022 11 (11) e1010627 -
Challenges and Opportunities for Global Genomic Surveillance Strategies in the COVID-19 Era.
Ling-Hu Ted et al. Viruses 2022 11 (11) -
Advancing disease genomics beyond COVID-19 and reducing health disparities: what does the future hold for Africa?
Ibe Chibuike et al. Briefings in functional genomics 2022 11 -
It Ain’t Over Till It’s Over…but It’s Never Over — Emerging and Reemerging Infectious Diseases
Fauci AS. New Engl J Med, Nov 26, 2022.
EVOLUTION / ECOLOGY / POPULATIONS
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Genome Sequences of Hemolytic and Nonhemolytic Listeria innocua Strains from Human, Food, and Environmental Sources.
McIntosh Tori et al. Microbiology resource announcements 2022 11 e0072322 -
Retrospective molecular investigation of Mayaro and Oropouche viruses at the human-animal interface in West-central Brazil, 2016-2018.
Dias Helver Gonçalves et al. PloS one 2022 11 (11) e0277612 -
The first complete genome of the simian malaria parasite Plasmodium brasilianum.
Bajic Marko et al. Scientific reports 2022 11 (1) 19802
PATHOGENICITY / ANTIMICROBIAL RESISTANCE
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Molecular mechanisms of antibiotic resistance revisited.
Darby Elizabeth M et al. Nature reviews. Microbiology 2022 11 -
An ancestral mycobacterial effector promotes dissemination of infection.
Saelens Joseph W et al. Cell 2022 11 (24) 4507-4525.e18 -
A Nationwide Plasmidome Surveillance in Thailand Reveals a Limited Variety of New Delhi Metallo-β-Lactamase-Producing Carbapenem-Resistant Enterobacteriaceae Clones and Spreading Plasmids.
Abe Ryuichiro et al. Journal of clinical microbiology 2022 11 e0108022 -
HIV-1 genetic diversity and transmitted drug resistance to integrase strand transfer inhibitors among recently diagnosed adults in Porto Alegre, South Brazil.
Nunes Cynara Carvalho et al. The Journal of antimicrobial chemotherapy 2022 10 (12) 3510-3514 -
High Level of Pretreatment and Acquired Human Immunodeficiency Virus Drug Resistance in El Salvador: A Nationally Representative Survey, 2018-2019.
Girón-Callejas Amalia et al. Open forum infectious diseases 2022 11 (11) ofac580 -
Dual use of antifungals in medicine and agriculture: How do we help prevent resistance developing in human pathogens?
Verweij Paul E et al. Drug resistance updates : reviews and commentaries in antimicrobial and anticancer chemotherapy 2022 10 100885
DETECTION / DIAGNOSIS
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Multiplex PCR Assay for Clade Typing of Salmonella enterica Serovar Enteritidis.
Gallichan Sarah et al. Microbiology spectrum 2022 11 e0318222 -
Culture-Independent Genotyping Improves Surveillance of Neisseria gonorrhoeae, Especially in Oropharyngeal Samples, the Netherlands, 2017 to 2018.
Slaats Michiel H C et al. Pathogens (Basel, Switzerland) 2022 11 (11) -
Identification and characterization of mixed infections of Chlamydia trachomatis via high-throughput sequencing.
Zhao Jianhui et al. Frontiers in microbiology 2022 11 1041789 -
Culture-Independent Detection and Identification of Leptospira Serovars.
Matthias Michael A et al. Microbiology spectrum 2022 11 e0247522 -
Fecal indicators and antibiotic resistance genes exhibit diurnal trends in the Chattahoochee River: Implications for water quality monitoring.
Nguyen Karena H et al. Frontiers in microbiology 2022 11 1029176 -
Sensitivity of Detection and Variant Typing of SARS-CoV-2 in European Laboratories.
Mögling Ramona et al. Journal of clinical microbiology 2022 11 e0126122 -
Dynamics of SARS-CoV-2 variants characterized during different COVID-19 waves in Mali.
Koné Amadou et al. IJID Regions (Online) 2022 11 -
Wastewater genomic surveillance captures early detection of Omicron in Utah
Gupta P, et al. medRxiv, Nov 29, 2022. -
Wastewater monitoring in tourist cities as potential sentinel sites for near real-time dynamics of imported SARS-CoV-2 variants.
Sangsanont Jatuwat et al. The Science of the total environment 2022 11 160317 -
Added Value of Next Generation over Sanger Sequencing in Kenyan Youth with Extensive HIV-1 Drug Resistance.
Novitsky V et al. Microbiology spectrum 2022 11 e0345422 -
Monitoring monkeypox virus in saliva and air samples in Spain: a cross-sectional study.
Hernaez Bruno et al. The Lancet. Microbe 2022 11
EPIDEMIOLOGY / OUTBREAKS / TRANSMISSION
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Competitive Transmission of Carbapenem-Resistant Klebsiella pneumoniae in a Newly Opened Intensive Care Unit.
Hu Ya et al. mSystems 2022 11 e0079922 -
A large-scale genomic snapshot of Klebsiella spp. isolates in Northern Italy reveals limited transmission between clinical and non-clinical settings.
Thorpe Harry A et al. Nature microbiology 2022 11 (12) 2054-2067 -
Global Expansion of SARS-CoV-2 Variants of Concern: Dispersal Patterns and Influence of Air Travel.
Tegally Houriiyah et al. medRxiv : the preprint server for health sciences 2022 12 -
Tracing the First Days of the SARS-CoV-2 Pandemic in Greece and the Role of the First Imported Group of Travelers.
Bousali Maria et al. Microbiology spectrum 2022 11 e0213422 -
Lessons learned: use of WGS in real-time investigation of suspected intrahospital SARS-CoV-2 outbreaks.
Berggreen H et al. The Journal of hospital infection 2022 11 81-88
ANTIMICROBIALS / VACCINES / INTERVENTIONS
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A multivalent nucleoside-modified mRNA vaccine against all known influenza virus subtypes.
Arevalo Claudia P et al. Science (New York, N.Y.) 2022 11 (6622) 899-904
HOST-MICROBE INTERACTIONS
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Enhanced Neutralization Resistance of SARS-CoV-2 Omicron Subvariants BQ.1, BQ.1.1, BA.4.6, BF.7 and BA.2.75.2
Qu P, et al. Cell Host Microbe, Nov 22, 2022. -
Variation in the ACE2 receptor has limited utility for SARS-CoV-2 host prediction.
Mollentze Nardus et al. eLife 2022 11
Disclaimer: Articles listed in the Advanced Molecular Detection Clips are selected by Public Health Genomics Branch to provide current awareness of the scientific literature and news. Inclusion in the clips does not necessarily represent the views of the Centers for Disease Control and Prevention nor does it imply endorsement of the article's methods or findings. CDC and DHHS assume no responsibility for the factual accuracy of the items presented. The selection, omission, or content of items does not imply any endorsement or other position taken by CDC or DHHS. Opinion, findings and conclusions expressed by the original authors of items included in the Clips, or persons quoted therein, are strictly their own and are in no way meant to represent the opinion or views of CDC or DHHS. References to publications, news sources, and non-CDC Websites are provided solely for informational purposes and do not imply endorsement by CDC or DHHS.
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- Page last updated:Apr 25, 2024
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