Skip directly to search
Skip directly to A to Z list
Skip directly to navigation
Skip directly to page options
Skip directly to site content
Start of Search Controls
Search Form Controls
Search The CDC
submit
CDC A-Z Index
MENU
CDC A-Z
SEARCH
A
B
C
D
E
F
G
H
I
J
K
L
M
N
O
P
Q
R
S
T
U
V
W
X
Y
Z
#
Search Form Controls
Search The CDC
submit
CDC A-Z Index
Public Health Genomics and Precision Health Knowledge Base (v10.0)
PHGKB
About
Public Health Genomics Branch
PHGKB Weekly Horizon Scan
Genomics Precision Health Scan
Advanced Molecular Detection Clips
Non-Genomics Precision Health Scan
CDC-authored Publications Scan
Specialized PHGKB
Cancer PHGKB
Diabetes PHGKB
Economic Evaluation PHGKB
Environmental Health PHGKB
Family Health History PHGKB
Health Equity PHGKB
HLBS-PopOmics
Infectious Diseases PHGKB
Implementation Science PHGKB
Neurological Disorders PHGKB
Pharmacogenomics PHGKB
Primary Immune Deficiency Diseases PHGKB
Rare Diseases PHGKB
Reproductive and Child Health PHGKB
All Databases
COVID-19 GPH (48127)
CDC/NIH Web Information Database (32258)
CDC-Authored Genomics and Precision Health Publications Database (6282)
Precision Health Database (64281)
Pathogen Advanced Molecular Detection Database (27597)
All of Us Reports and Publications Database (930)
Human Genome Epidemiology
Human Genome Epidemiology Literature Finder (231234)
Epigenetic Epidemiology Publications Database (23564)
Release Note
Contact Us
CDC-Authored Genomics and Precision Health Publications Database|Home|Public Health Genomics and Precision Health Knowledge Base (PHGKB)
CDC-Authored Genomics and Precision Health Publications Database
Last data update: Sep 03, 2024
. (Total: 6282 publications)
All
Cancer
Diabetes
Economic
Environmental
Equity
FHH
HLBS
ID
Implementation
ND
PGx
PI
Rare
RCH
dataset
Filtered By:
Select to fine-tune your search
Year
Journal
Next
Records 1-30 (of 140 Records)
Query Trace:
E.coli[original query]
Shiga toxin-producing Escherichia coli O157:H7 outbreak associated with school field trips at a farm animal exhibit-Tennessee, September-October 2023
Thomas CM
,
Foster A , Boop S , Kirschke D , Mooney H , Reid I , May AS , Mullins H , Garman KN , Golwalkar M , Marr JH , Orejuela K , Ripley D , Rasnic R , Terrell E , Durso LM , Schaffner W , Jones TF , Fill MA , Dunn JR .
Zoonoses Public Health 2024
Potentially zoonotic enteric infections in gorillas and Chimpanzees, Cameroon and Tanzania
Strahan EK ,
Witherbee J
,
Bergl R , Lonsdorf EV , Mwacha D , Mjungu D , Arandjelovic M , Ikfuingei R , Terio K , Travis DA , Gillespie TR .
Emerg Infect Dis 2024 30 (3) 577-580
Multicenter evaluation of BioCode GPP for syndromic molecular detection of gastrointestinal pathogens from stool specimens
Knoth C , Humphries R , Johnson JK , Patel A , Lima A , Silbert S ,
Vinjé J
.
J Clin Microbiol 2024 e0154523
Erratum for Pattabiraman and Bopp, Draft Whole-Genome Sequences of 10 Serogroup O6 Enterotoxigenic Escherichia coli Strains.
Pattabiraman V
,
Bopp CA
.
Genome Announc 2016 4 (3)
Correction for Pattabiraman and Bopp, Draft Whole-Genome Sequences of Nine Enterotoxigenic Escherichia coli Serogroup O6 Strains.
Pattabiraman V
,
Bopp CA
.
Genome Announc 2016 4 (3)
Multistate nontyphoidal Salmonella and Shiga toxin-producing Escherichia coli outbreaks linked to international travel - United States, 2017-2020
Habrun CA
,
Birhane MG
,
François Watkins LK
,
Benedict K
,
Bottichio L
,
Nemechek K
,
Tolar B
,
Schroeder MN
,
Chen JC
,
Caidi H
,
Robyn M
,
Nichols M
.
Epidemiol Infect 2024 1-33
Genomic and phenotypic characterization of shiga toxin-producing Escherichia albertii strains isolated from wild birds in a major agricultural region in California
Carter MQ , Quiñones B , He X , Pham A , Carychao D , Cooley MB , Lo CC , Chain PSG ,
Lindsey RL
,
Bono JL .
Microorganisms 2023 11 (11)
Identification and characterization of ten Escherichia coli strains encoding novel shiga toxin 2 subtypes, Stx2n as well as Stx2j, Stx2m, and Stx2o, in the United States
Lindsey RL
,
Prasad A , Feldgarden M , Gonzalez-Escalona N ,
Kapsak C
,
Klimke W , Melton-Celsa A ,
Smith P
,
Souvorov A , Truong J , Scheutz F .
Microorganisms 2023 11 (10)
Laboratory criteria for exclusion and readmission of potentially infectious persons in sensitive settings in the age of culture-independent diagnostic tests: Report of a multidisciplinary workgroup
Besser J , Singer R , Jervis R ,
Boxrud D
,
Smith K , Daly ER .
J Food Prot 2023 86 (12) 100173
Gut microbiome perturbation, antibiotic resistance, and Escherichia coli strain dynamics associated with international travel: a metagenomic analysis
Worby CJ , Sridhar S , Turbett SE , Becker MV , Kogut L , Sanchez V , Bronson RA , Rao SR , Oliver E ,
Walker AT
,
Walters MS
,
Kelly P , Leung DT , Knouse MC , Hagmann SHF , Harris JB , Ryan ET , Earl AM , LaRocque RC .
Lancet Microbe 2023 4 (10) e790-e799
Investigation of multidrug-resistant plasmids from carbapenemase-producing Klebsiella pneumoniae clinical isolates from Pakistan
Lascols C
,
Cherney B
,
Conley AB , Rishishwar L , Crawford MA , Morse SA , Fisher DJ , Anderson K , Hodge DR , Pillai SP , Hughes MA , Khan E ,
Sue D
.
Front Microbiol 2023 14 1192097
O-antigen diversification masks identification of highly pathogenic shiga toxin-producing Escherichia coli O104:H4-like strains
Lang C , Fruth A , Campbell IW , Jenkins C ,
Smith P
,
Strockbine N
,
Weill FX , Nübel U , Grad YH , Waldor MK , Flieger A .
Microbiol Spectr 2023 11 (3) e0098723
Detecting national human enteric disease outbreaks linked to animal contact in the United States of America.
Nichols M
,
Stevenson L
,
Koski L
,
Basler C
,
Wise M
,
Whitlock L
,
Francois Watkins L
,
Friedman CR
,
Chen J
,
Tagg K
,
Joseph L
,
Caidi H
,
Patel K
,
Tolar B
,
Hise K
,
Classon A
,
Ceric O , Reimschuessel R ,
Williams IT
.
Rev Sci Tech 2020 39 (2) 471-480
Evaluation of core genome and whole genome multilocus sequence typing schemes for Campylobacter jejuni and Campylobacter coli outbreak detection in the USA
Joseph LA
,
Griswold T
,
Vidyaprakash E
,
Im SB
,
Williams GM
,
Pouseele HA ,
Hise KB
,
Carleton HA
.
Microb Genom 2023 9 (5)
Epidemiology of enteroaggregative, enteropathogenic, and shiga toxin-producing escherichia coli among children aged <5 years in 3 countries in Africa, 2015-2018: Vaccine Impact on Diarrhea in Africa (VIDA) Study
Ochieng JB , Powell H ,
Sugerman CE
,
Omore R , Ogwel B , Juma J , Awuor AO , Sow SO , Sanogo D , Onwuchekwa U , Keita AM , Traoré A , Badji H , Hossain MJ , Jones JCM , Kasumba IN , Nasrin D , Roose A , Liang Y , Jamka LP , Antonio M , Platts-Mills JA , Liu J , Houpt ER ,
Mintz ED
,
Hunsperger E
,
Onyango CO
,
Strockbine N
,
Widdowson MA
,
Verani JR
,
Tennant SM , Kotloff KL .
Clin Infect Dis 2023 76 S77-s86
First Known Report of mcr-Harboring Enterobacteriaceae in the Dominican Republic.
Perdomo A ,
Webb HE
,
Bugarel M ,
Friedman CR
,
Francois Watkins LK
,
Loneragan GH , Calle A .
Int J Environ Res Public Health 2023 20 (6)
Fecal indicators and antibiotic resistance genes exhibit diurnal trends in the Chattahoochee River: Implications for water quality monitoring.
Nguyen KH , Smith S ,
Roundtree A
,
Feistel DJ
,
Kirby AE
,
Levy K ,
Mattioli MC
.
Front Microbiol 2022 13 1029176
Changing Diagnostic Testing Practices for Foodborne Pathogens, Foodborne Diseases Active Surveillance Network, 2012-2019.
Ray LC
,
Griffin PM
,
Wymore K , Wilson E , Hurd S , LaClair B , Wozny S , Eikmeier D , Nicholson C , Burzlaff K , Hatch J , Fankhauser M , Kubota K ,
Huang JY
,
Geissler A
,
Payne DC
,
Tack DM
.
Open Forum Infect Dis 2022 9 (8) ofac344
Use of Large-Scale Genomics to Identify the Role of Animals and Foods as Potential Sources of Extraintestinal Pathogenic Escherichia coli That Cause Human Illness.
Harrison L , Tyson GH , Strain E ,
Lindsey RL
,
Strockbine N
,
Ceric O , Fortenberry GZ , Harris B , Shaw S , Tillman G , Zhao S , Dessai U .
Foods 2022 11 (13)
Litter Commensal Bacteria Can Limit the Horizontal Gene Transfer of Antimicrobial Resistance to Salmonella in Chickens.
Oladeinde A , Abdo Z , Zwirzitz B , Woyda R , Lakin SM , Press MO , Cox NA ,
Thomas JCth
,
Looft T , Rothrock MJJr , Zock G , Plumblee Lawrence J , Cudnik D , Ritz C , Aggrey SE , Liachko I , Grove JR , Wiersma C .
Appl Environ Microbiol 2022 88 (9) e0251721
PgtE Enzyme of Salmonella enterica Shares the Similar Biological Roles to Plasminogen Activator (Pla) in Interacting With DEC-205 (CD205), and Enhancing Host Dissemination and Infectivity by Yersinia pestis.
Li Q , Ye C , Zhao F , Li W , Zhu S , Lv Y , Park CG , Zhang Y , Jiang LY , Yang K , He Y , Cai H , Zhang S , Ding HH , Njiri OA , Tembo JM , Alkraiem AA , Li AY , Sun ZY , Li W , Yan MY , Kan B , Huo X ,
Klena JD
,
Skurnik M , Anisimov AP , Gao X , Han Y , Yang RF , Xiamu X , Wang Y , Chen H , Chai B , Sun Y , Yuan J , Chen T .
Front Immunol 2022 13 791799
Genome Sequence of Escherichia coli Isolated from an Adult in Kibera, an Urban Informal Settlement in Nairobi, Kenya.
Kikwai GK ,
Juma B
,
Nindo F , Ochieng C , Wamola N , Mbogo K , Call DR ,
Hunsperger E
.
Microbiol Resour Announc 2022 11 (4) e0124121
Effective Oral RNA Interference (RNAi) Administration to Adult Anopheles gambiae Mosquitoes.
Taracena M
,
Hunt C
,
Pennington P , Andrew D , Jacobs-Lorena M , Dotson E , Wells M .
J Vis Exp 2022 (181)
Burden of Diarrheagenic Escherichia coli in Santa Rosa, Guatemala in active health-services surveillance during 2008-2009 and 2014-2015.
Jarquin C , Morales O , McCracken JP , Lopez MR , Lopez B , Reyes L ,
Gmez GA
,
Bryan JP , Peruski LF ,
Pattabiraman V
,
Parsons MB
.
Trop Med Int Health 2022 27 (4) 408-417
Epidemiology of extended-spectrum β-lactamase-producing Enterobacterales in five US sites participating in the Emerging Infections Program, 2017.
Duffy N
,
Karlsson M
,
Reses HE
,
Campbell D
,
Daniels J
,
Stanton RA
,
Janelle SJ , Schutz K , Bamberg W , Rebolledo PA , Bower C , Blakney R , Jacob JT , Phipps EC , Flores KG , Dumyati G , Kopin H , Tsay R , Kainer MA , Muleta D , Byrd-Warner B ,
Grass JE
,
Lutgring JD
,
Rasheed JK
,
Elkins CA
,
Magill SS
,
See I
.
Infect Control Hosp Epidemiol 2022 43 (11) 1-9
Molecular Characterization of Carbapenem-Resistant Enterobacterales Collected in the United States.
Karlsson M
,
Lutgring JD
,
Ansari U
,
Lawsin A
,
Albrecht V
,
McAllister G
,
Daniels J
,
Lonsway D
,
McKay S
,
Beldavs Z , Bower C , Dumyati G , Gross A , Jacob J , Janelle S , Kainer MA , Lynfield R , Phipps EC , Schutz K , Wilson L , Witwer ML ,
Bulens SN
,
Walters MS
,
Duffy N
,
Kallen AJ
,
Elkins CA
,
Rasheed JK
.
Microb Drug Resist 2022 28 (4) 389-397
Distinctive Features of Ertapenem-Mono-Resistant Carbapenem-Resistant Enterobacterales in the United States: A Cohort Study.
Adelman MW , Bower CW ,
Grass JE
,
Ansari UA
,
Soda EA
,
See I
,
Lutgring JD
,
Jacob JT .
Open Forum Infect Dis 2022 9 (1) ofab643
Agritourism and Kidding Season: A Large Outbreak of Human Shiga Toxin-Producing Escherichia coli O157 (STEC O157) Infections Linked to a Goat Dairy Farm-Connecticut, 2016.
Nichols MC
,
Gacek P , Phan Q ,
Gambino-Shirley KJ
,
Gollarza LM
,
Schroeder MN
,
Mercante A
,
Mullins J ,
Blackstock A
,
Laughlin ME
,
Olson SM
,
Pizzo E , Nguyen TN , Mank L , Holmes-Talbot K , McNutt A , Noel D , Muyombwe A , Razeq JH , Lis MJ , Sherman B , Kasacek W ,
Whitlock L
,
Strockbine N
,
Martin H
,
Vidyaprakash E
,
McCormack P , Cartter M .
Front Vet Sci 2021 8 744055
Evaluating whole-genome sequencing quality metrics for enteric pathogen outbreaks.
Wagner DD
,
Carleton HA
,
Trees E ,
Katz LS
.
PeerJ 2021 9 e12446
A global repository of novel antimicrobial emergence events.
Mendelsohn E , Daszak P , Ross N , White AM , Whiting K , Basaraba C , Watson Madubuonwu B , Johnson E ,
Dualeh M
,
Matson Z
,
Dattaray S , Ezeokoli N , Kirshenbaum Lieberman M , Kotcher J , Maher S , Zambrana-Torrelio C .
F1000Res 2021 9 1320
File Formats Help:
How do I view different file formats (PDF, DOC, PPT, MPEG) on this site?
Adobe PDF file
Microsoft PowerPoint file
Microsoft Word file
Microsoft Excel file
Audio/Video file
Apple Quicktime file
RealPlayer file
Text file
Zip Archive file
SAS file
ePub file
Page last reviewed:
Feb 1, 2024
Content source:
Public Health Genomics Branch in the Division of Blood Disorders and Public Health Genomics
,
National Center on Birth Defects and Developmental Disabilities
TOP