CDC-Authored Genomics and Precision Health Publications Database

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Last data update: Dec 02, 2024. (Total: 6432 publications)

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Records 1-30 (of 36 Records)

Query Trace: Zaki S[original query]
Epidemiologic and genomic characterization of an outbreak of Rift Valley fever among humans and dairy cattle in northern Tanzania Madut DB , Rubach MP , Allan KJ , Thomas KM , de Glanville WA , Halliday JEB , Costales C , Carugati M , Rolfe RJ , Bonnewell JP , Maze MJ , Mremi AR , Amsi PT , Kalengo NH , Lyamuya F , Kinabo GD , Mbwasi R , Kilonzo KG , Maro VP , Mmbaga BT , Lwezaula B , Mosha C , Marandu A , Kibona TJ , Zhu F , Chawla T , Chia WN , Anderson DE , Wang LF , Liu J , Houpt ER , Martines RB , Zaki SR , Leach A , Gibbons A , Chiang CF , Patel K , Klena JD , Cleaveland S , Crump JA . J Infect Dis 2024
Vaccine-associated varicella and rubella infections in severe combined immunodeficiency with isolated CD4 lymphocytopenia and mutations in IL7R detected by tandem whole exome sequencing and chromosomal microarray. Bayer DK , Martinez CA , Sorte HS , Forbes LR , Demmler-Harrison GJ , Hanson IC , Pearson NM , Noroski LM , Zaki SR , Bellini WJ , Leduc MS , Yang Y , Eng CM , Patel A , Rodningen OK , Muzny DM , Gibbs RA , Campbell IM , Shaw CA , Baker MW , Zhang V , Lupski JR , Orange JS , Seeborg FO , Stray-Pedersen A . Clin Exp Immunol 2014 178 (3) 459-69
Multistate Outbreak of Melioidosis Associated with Imported Aromatherapy Spray. Gee JE , Bower WA , Kunkel A , Petras J , Gettings J , Bye M , Firestone M , Elrod MG , Liu L , Blaney DD , Zaldivar A , Raybern C , Ahmed FS , Honza H , Stonecipher S , O'Sullivan BJ , Lynfield R , Hunter M , Brennan S , Pavlick J , Gabel J , Drenzek C , Geller R , Lee C , Ritter JM , Zaki SR , Gulvik CA , Wilson WW , Beshearse E , Currie BJ , Webb JR , Weiner ZP , Negrón ME , Hoffmaster AR . N Engl J Med 2022 386 (9) 861-868
Effect of Time Since Death on Multipathogen Molecular Test Results of Postmortem Specimens Collected Using Minimally Invasive Tissue Sampling Techniques. Dawa J , Walong E , Onyango C , Mathaiya J , Muturi P , Bunei M , Ochieng W , Barake W , Seixas JN , Mayieka L , Ochieng M , Omballa V , Lidechi S , Hunsperger E , Otieno NA , Ritter JM , Widdowson MA , Diaz MH , Winchell JM , Martines RB , Zaki SR , Chaves SS . Clin Infect Dis 2021 73 S360-s367
SPECIAL REPORT: A standardized definition of placental infection by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), a consensus statement from the National Institutes of Health/Eunice Kennedy Shriver National Institute of Child Health and Human Development (NIH/NICHD) SARS-CoV-2 placental infection workshop. Roberts DJ , Edlow AG , Romero RJ , Coyne CB , Ting DT , Hornick JL , Zaki SR , Adhikari UD , Serghides L , Gaw SL , Metz TD . Am J Obstet Gynecol 2021 225 (6) 593 e1-593 e9
Performance evaluation of fungal DNA PCR amplification from formalin-fixed paraffin-embedded tissue for diagnosis; experience of a tertiary reference laboratory. Lysen C , Silva-Flannery L , Zaki SR , Gary JM , Lockhart SR . Mycoses 2021 64 (6) 603-611
Evidence of SARS-CoV-2 Replication and Tropism in the Lungs, Airways and Vascular Endothelium of Patients with Fatal COVID-19: An Autopsy Case-Series. Bhatnagar J , Gary J , Reagan-Steiner S , Estetter LB , Tong S , Tao Y , Denison AM , Lee E , DeLeon-Carnes M , Li Y , Uehara A , Paden CR , Leitgeb B , Uyeki TM , Martines RB , Ritter JM , Paddock CD , Shieh WJ , Zaki SR . J Infect Dis 2021 223 (5) 752-764
Investigation of a Large Diphtheria Outbreak and Co-circulation of Corynebacterium pseudodiphtheriticum among Forcibly Displaced Myanmar Nationals, 2017-2019. Weil LM , Williams MM , Shirin T , Lawrence M , Habib ZH , Aneke JS , Tondella ML , Zaki Q , Cassiday PK , Lonsway D , Farrque M , Hossen T , Feldstein LR , Cook N , Maldonado-Quiles G , Alam AN , Muraduzzaman AKM , Akram A , Conklin L , Doan S , Friedman M , Acosta AM , Hariri S , Fox LM , Tiwari TSP , Flora MS . J Infect Dis 2020 224 (2) 318-325
Virulent infection of outbred Hartley guinea pigs with recombinant Pichinde virus as a surrogate small animal model for human Lassa fever. Lan S , Shieh WJ , Huang Q , Zaki SR , Liang Y , Ly H . Virulence 2020 11 (1) 1131-1141
The Crimean-Congo Hemorrhagic Fever Virus NSm Protein is Dispensable for Growth In Vitro and Disease in Ifnar -/- Mice. Welch SR , Scholte FEM , Spengler JR , Ritter JM , Coleman-McCray JD , Harmon JR , Nichol ST , Zaki SR , Spiropoulou CF , Bergeron E . Microorganisms 2020 8 (5)
Zika virus enhances monocyte adhesion and transmigration favoring viral dissemination to neural cells. Ayala-Nunez NV , Follain G , Delalande F , Hirschler A , Partiot E , Hale GL , Bollweg BC , Roels J , Chazal M , Bakoa F , Carocci M , Bourdoulous S , Faklaris O , Zaki SR , Eckly A , Uring-Lambert B , Doussau F , Cianferani S , Carapito C , Jacobs FMJ , Jouvenet N , Goetz JG , Gaudin R . Nat Commun 2019 10 (1) 4430
Respiratory Illness Associated With Emergent Human Adenovirus Genome Type 7d, New Jersey, 2016-2017. Killerby ME , Rozwadowski F , Lu X , Caulcrick-Grimes M , McHugh L , Haldeman AM , Fulton T , Schneider E , Sakthivel SK , Bhatnagar J , Rabeneck DB , Zaki S , Gerber SI , Watson JT . Open Forum Infect Dis 2019 6 (2) ofz017
Outbreak of Tattoo-Associated Nontuberculous Mycobacterial Skin Infections. Griffin I , Schmitz A , Oliver C , Pritchard S , Zhang G , Rico E , Davenport E , Llau A , Moore E , Fernandez D , Mejia-Echeverry A , Suarez J , Noya-Chaveco P , Elmir S , Jean R , Pettengill JB , Hollinger KA , Chou K , Williams-Hill D , Zaki S , Muehlenbachs A , Keating MK , Bhatnagar J , Rowlinson MC , Chiribau C , Rivera L . Clin Infect Dis 2018 69 (6) 949-955
Zika Virus RNA Replication and Persistence in Brain and Placental Tissue. Bhatnagar J , Rabeneck DB , Martines RB , Reagan-Steiner S , Ermias Y , Estetter LB , Suzuki T , Ritter J , Keating MK , Hale G , Gary J , Muehlenbachs A , Lambert A , Lanciotti R , Oduyebo T , Meaney-Delman D , Bolanos F , Saad EA , Shieh WJ , Zaki SR . Emerg Infect Dis 2017 23 (3) 405-414
Influenza virus exploits tunneling nanotubes for cell-to-cell spread. Kumar A , Kim JH , Ranjan P , Metcalfe MG , Cao W , Mishina M , Gangappa S , Guo Z , Boyden ES , Zaki S , York I , Garcia-Sastre A , Shaw M , Sambhara S . Sci Rep 2017 7 40360
Prolonged detection of Zika virus RNA in pregnant women Meaney-Delman D , Oduyebo T , Polen KN , White JL , Bingham AM , Slavinski SA , Heberlein-Larson L , St George K , Rakeman JL , Hills S , Olson CK , Adamski A , Culver Barlow L , Lee EH , Likos AM , Munoz JL , Petersen EE , Dufort EM , Dean AB , Cortese MM , Santiago GA , Bhatnagar J , Powers AM , Zaki S , Petersen LR , Jamieson DJ , Honein MA . Obstet Gynecol 2016 128 (4) 724-730
Malignant Transformation of Hymenolepis nana in a Human Host. Muehlenbachs A , Bhatnagar J , Agudelo CA , Hidron A , Eberhard ML , Mathison BA , Frace MA , Ito A , Metcalfe MG , Rollin DC , Visvesvara GS , Pham CD , Jones TL , Greer PW , Velez Hoyos A , Olson PD , Diazgranados LR , Zaki SR . N Engl J Med 2015 373 (19) 1845-52
Identification of Influenza A/PR/8/34 Donor Viruses Imparting High Hemagglutinin Yields to Candidate Vaccine Viruses in Eggs. Johnson A , Chen LM , Winne E , Santana W , Metcalfe MG , Mateu-Petit G , Ridenour C , Hossain MJ , Villanueva J , Zaki SR , Williams TL , Cox NJ , Barr JR , Donis RO . PLoS One 2015 10 (6) e0128982
Transmission of methicillin-resistant Staphylococcus aureus infection through solid organ transplantation: confirmation via whole genome sequencing. Wendt JM , Kaul D , Limbago BM , Ramesh M , Cohle S , Denison AM , Driebe EM , Rasheed JK , Zaki SR , Blau DM , Paddock CD , McDougal LK , Engelthaler DM , Keim PS , Roe CC , Akselrod H , Kuehnert MJ , Basavaraju SV . Am J Transplant 2014 14 (11) 2633-9
Molecular characterization of Staphylococcus aureus and influenza virus coinfections in patients with fatal pneumonia Denison AM , Deleon-Carnes M , Blau DM , Shattuck EC , McDougal LK , Rasheed JK , Limbago BM , Zaki SR , Paddock CD . J Clin Microbiol 2013 51 (12) 4223-5
Localization of pandemic 2009 H1N1 influenza A virus RNA in lung and lymph nodes of fatal influenza cases by in situ hybridization: new insights on virus replication and pathogenesis. Bhatnagar J , Jones T , Blau DM , Shieh WJ , Paddock CD , Drew C , Denison AM , Rollin DC , Patel M , Zaki SR . J Clin Virol 2012 56 (3) 232-7
Necrotizing cutaneous mucormycosis after a tornado in Joplin, Missouri, in 2011 Fanfair RN , Benedict K , Bos J , Bennett SD , Lo YC , Adebanjo T , Etienne K , Deak E , Derado G , Shieh WJ , Drew C , Zaki S , Sugerman D , Gade L , Thompson EH , Sutton DA , Engelthaler DM , Schupp JM , Brandt ME , Harris JR , Lockhart SR , Turabelidze G , Park BJ . N Engl J Med 2012 367 (23) 2214-25
Seasonal pulses of Marburg virus circulation in juvenile Rousettus aegyptiacus bats coincide with periods of increased risk of human infection Amman BR , Carroll SA , Reed ZD , Sealy TK , Balinandi S , Swanepoel R , Kemp A , Erickson BR , Comer JA , Campbell S , Cannon DL , Khristova ML , Atimnedi P , Paddock CD , Kent Crockett RJ , Flietstra TD , Warfield KL , Unfer R , Katongole-Mbidde E , Downing R , Tappero JW , Zaki SR , Rollin PE , Ksiazek TG , Nichol ST , Towner JS . PLoS Pathog 2012 8 (10) e1002877
The pox in the North American backyard: Volepox virus pathogenesis in California mice (Peromyscus californicus) Gallardo-Romero NF , Drew CP , Weiss SL , Metcalfe MG , Nakazawa YJ , Smith SK , Emerson GL , Hutson CL , Salzer JS , Bartlett JH , Olson VA , Clemmons CJ , Davidson WB , Zaki SR , Karem KL , Damon IK , Carroll DS . PLoS One 2012 7 (8) e43881
A new phlebovirus associated with severe febrile illness in Missouri. McMullan LK , Folk SM , Kelly AJ , MacNeil A , Goldsmith CS , Metcalfe MG , Batten BC , Albarino CG , Zaki SR , Rollin PE , Nicholson WL , Nichol ST . N Engl J Med 2012 367 (9) 834-41
Solid organ transplant-associated lymphocytic choriomeningitis, United States, 2011 MacNeil A , Stroher U , Farnon E , Campbell S , Cannon D , Paddock CD , Drew CP , Kuehnert M , Knust B , Gruenenfelder R , Zaki SR , Rollin PE , Nichol ST . Emerg Infect Dis 2012 18 (8) 1256-1262
A large outbreak of typhoid fever associated with a high rate of intestinal perforation in Kasese District, Uganda, 2008-2009 Neil KP , Sodha SV , Lukwago L , Tipo SO , Mikoleit M , Simington SD , Mukobi P , Balinandi S , Majalija S , Ayers J , Kagirita A , Wefula E , Asiimwe F , Kweyamba V , Talkington D , Shieh WJ , Adem P , Batten BC , Zaki SR , Mintz E . Clin Infect Dis 2012 54 (8) 1091-9
Molecular detection and typing of dengue viruses from archived tissues of fatal cases by rt-PCR and sequencing: diagnostic and epidemiologic implications. Bhatnagar J , Blau DM , Shieh WJ , Paddock CD , Drew C , Liu L , Jones T , Patel M , Zaki SR . Am J Trop Med Hyg 2012 86 (2) 335-40
A pilot study of host genetic variants associated with influenza-associated deaths among children and young adults. Ferdinands JM , Denison AM , Dowling NF , Jost HA , Gwinn ML , Liu L , Zaki SR , Shay DK . Emerg Infect Dis 2011 17 (12) 2294-302
Diagnosis of influenza from respiratory autopsy tissues: detection of virus by real-time reverse transcription-PCR in 222 cases. Denison AM , Blau DM , Jost HA , Jones T , Rollin D , Gao R , Liu L , Bhatnagar J , Deleon-Carnes M , Shieh WJ , Paddock CD , Drew C , Adem P , Emery SL , Shu B , Wu KH , Batten B , Greer PW , Smith CS , Bartlett J , Montague JL , Patel M , Xu X , Lindstrom S , Klimov AI , Zaki SR . J Mol Diagn 2011 13 (2) 123-8