CDC-Authored Genomics and Precision Health Publications Database
Last data update: Mar 21, 2025. (Total: 6600 publications)
| Query Trace: Ye T[original query] |
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| Case of human orthohantavirus infection, Michigan, USA, 2021
Goodfellow SM , Nofchissey RA , Arsnoe D , Ye C , Lee S , Park J , Kim WK , Chandran K , Whitmer SLM , Klena JD , Dyal JW , Shoemaker T , Riner D , Stobierski MG , Signs K , Bradfute SB . Emerg Infect Dis 2024 30 (4) 817-821 
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| Coordinated evolution among hepatitis C virus genomic sites is coupled to host factors and resistance to interferon.
Lara J , Tavis JE , Donlin MJ , Lee WM , Yuan HJ , Pearlman BL , Vaughan G , Forbi JC , Xia GL , Khudyakov YE . In Silico Biol 2011 11 213-24 |
| Global phylogeography and evolutionary history of Shigella dysenteriae type 1.
Njamkepo E , Fawal N , Tran-Dien A , Hawkey J , Strockbine N , Jenkins C , Talukder KA , Bercion R , Kuleshov K , Kolínská R , Russell JE , Kaftyreva L , Accou-Demartin M , Karas A , Vandenberg O , Mather AE , Mason CJ , Page AJ , Ramamurthy T , Bizet C , Gamian A , Carle I , Sow AG , Bouchier C , Wester AL , Lejay-Collin M , Fonkoua MC , Le Hello S , Blaser MJ , Jernberg C , Ruckly C , Mérens A , Page AL , Aslett M , Roggentin P , Fruth A , Denamur E , Venkatesan M , Bercovier H , Bodhidatta L , Chiou CS , Clermont D , Colonna B , Egorova S , Pazhani GP , Ezernitchi AV , Guigon G , Harris SR , Izumiya H , Korzeniowska-Kowal A , Lutyńska A , Gouali M , Grimont F , Langendorf C , Marejková M , Peterson LA , Perez-Perez G , Ngandjio A , Podkolzin A , Souche E , Makarova M , Shipulin GA , Ye C , Žemličková H , Herpay M , Grimont PA , Parkhill J , Sansonetti P , Holt KE , Brisse S , Thomson NR , Weill FX . Nat Microbiol 2016 1 16027 |
| Annual (2023) taxonomic update of RNA-directed RNA polymerase-encoding negative-sense RNA viruses (realm Riboviria: kingdom Orthornavirae: phylum Negarnaviricota)
Kuhn JH , Abe J , Adkins S , Alkhovsky SV , Avšič-Županc T , Ayllón MA , Bahl J , Balkema-Buschmann A , Ballinger MJ , Kumar Baranwal V , Beer M , Bejerman N , Bergeron É , Biedenkopf N , Blair CD , Blasdell KR , Blouin AG , Bradfute SB , Briese T , Brown PA , Buchholz UJ , Buchmeier MJ , Bukreyev A , Burt F , Büttner C , Calisher CH , Cao M , Casas I , Chandran K , Charrel RN , Kumar Chaturvedi K , Chooi KM , Crane A , Dal Bó E , Carlos de la Torre J , de Souza WM , de Swart RL , Debat H , Dheilly NM , Di Paola N , Di Serio F , Dietzgen RG , Digiaro M , Drexler JF , Duprex WP , Dürrwald R , Easton AJ , Elbeaino T , Ergünay K , Feng G , Firth AE , Fooks AR , Formenty PBH , Freitas-Astúa J , Gago-Zachert S , Laura García M , García-Sastre A , Garrison AR , Gaskin TR , Gong W , Gonzalez JJ , de Bellocq J , Griffiths A , Groschup MH , Günther I , Günther S , Hammond J , Hasegawa Y , Hayashi K , Hepojoki J , Higgins CM , Hongō S , Horie M , Hughes HR , Hume AJ , Hyndman TH , Ikeda K , Jiāng D , Jonson GB , Junglen S , Klempa B , Klingström J , Kondō H , Koonin EV , Krupovic M , Kubota K , Kurath G , Laenen L , Lambert AJ , Lǐ J , Li JM , Liu R , Lukashevich IS , MacDiarmid RM , Maes P , Marklewitz M , Marshall SH , Marzano SL , McCauley JW , Mirazimi A , Mühlberger E , Nabeshima T , Naidu R , Natsuaki T , Navarro B , Navarro JA , Neriya Y , Netesov SV , Neumann G , Nowotny N , Nunes MRT , Ochoa-Corona FM , Okada T , Palacios G , Pallás V , Papa A , Paraskevopoulou S , Parrish CR , Pauvolid-Corrêa A , Pawęska JT , Pérez DR , Pfaff F , Plemper RK , Postler TS , Rabbidge LO , Radoshitzky SR , Ramos-González PL , Rehanek M , Resende RO , Reyes CA , Rodrigues TCS , Romanowski V , Rubbenstroth D , Rubino L , Runstadler JA , Sabanadzovic S , Sadiq S , Salvato MS , Sasaya T , Schwemmle M , Sharpe SR , Shi M , Shimomoto Y , Kavi Sidharthan V , Sironi M , Smither S , Song JW , Spann KM , Spengler JR , Stenglein MD , Takada A , Takeyama S , Tatara A , Tesh RB , Thornburg NJ , Tian X , Tischler ND , Tomitaka Y , Tomonaga K , Tordo N , Tu C , Turina M , Tzanetakis IE , Maria Vaira A , van den Hoogen B , Vanmechelen B , Vasilakis N , Verbeek M , von Bargen S , Wada J , Wahl V , Walker PJ , Waltzek TB , Whitfield AE , Wolf YI , Xia H , Xylogianni E , Yanagisawa H , Yano K , Ye G , Yuan Z , Zerbini FM , Zhang G , Zhang S , Zhang YZ , Zhao L , Økland AL . J Gen Virol 2023 104 (8) |
| MicroRNA-based discovery of biomarkers, therapeutic targets, and repositioning drugs for breast cancer
Ye Q , Raese RA , Luo D , Feng J , Xin W , Dong C , Qian Y , Guo NL . Cells 2023 12 (14) |
| Expression-based diagnosis, treatment selection, and drug development for breast cancer
Ye Q , Wang J , Ducatman B , Raese RA , Rogers JL , Wan YW , Dong C , Padden L , Pugacheva EN , Qian Y , Guo NL . Int J Mol Sci 2023 24 (13) |
| 2022 taxonomic update of phylum Negarnaviricota (Riboviria: Orthornavirae), including the large orders Bunyavirales and Mononegavirales.
Kuhn JH , Adkins S , Alkhovsky SV , Avi-upanc T , Aylln MA , Bahl J , Balkema-Buschmann A , Ballinger MJ , Bandte M , Beer M , Bejerman N , Bergeron , Biedenkopf N , Bigarr L , Blair CD , Blasdell KR , Bradfute SB , Briese T , Brown PA , Bruggmann R , Buchholz UJ , Buchmeier MJ , Bukreyev A , Burt F , Bttner C , Calisher CH , Candresse T , Carson J , Casas I , Chandran K , Charrel RN , Chiaki Y , Crane A , Crane M , Dacheux L , B ED , delaTorre JC , deLamballerie X , deSouza WM , deSwart RL , Dheilly NM , DiPaola N , DiSerio F , Dietzgen RG , Digiaro M , Drexler JF , Duprex WP , Drrwald R , Easton AJ , Elbeaino T , Ergnay K , Feng G , Feuvrier C , Firth AE , Fooks AR , Formenty PBH , Freitas-Asta J , Gago-Zachert S , Garca ML , Garca-Sastre A , Garrison AR , Godwin SE , Gonzalez JJ , deBellocq JG , Griffiths A , Groschup MH , Gnther S , Hammond J , Hepojoki J , Hierweger MM , Hong S , Horie M , Horikawa H , Hughes HR , Hume AJ , Hyndman TH , Jing D , Jonson GB , Junglen S , Kadono F , Karlin DG , Klempa B , Klingstrm J , Koch MC , Kond H , Koonin EV , Krsov J , Krupovic M , Kubota K , Kuzmin IV , Laenen L , Lambert AJ , L J , Li JM , Lieffrig F , Lukashevich IS , Luo D , Maes P , Marklewitz M , Marshall SH , Marzano SL , McCauley JW , Mirazimi A , Mohr PG , Moody NJG , Morita Y , Morrison RN , Mhlberger E , Naidu R , Natsuaki T , Navarro JA , Neriya Y , Netesov SV , Neumann G , Nowotny N , Ochoa-Corona FM , Palacios G , Pallandre L , Palls V , Papa A , Paraskevopoulou S , Parrish CR , Pauvolid-Corra A , Pawska JT , Prez DR , Pfaff F , Plemper RK , Postler TS , Pozet F , Radoshitzky SR , Ramos-Gonzlez PL , Rehanek M , Resende RO , Reyes CA , Romanowski V , Rubbenstroth D , Rubino L , Rumbou A , Runstadler JA , Rupp M , Sabanadzovic S , Sasaya T , Schmidt-Posthaus H , Schwemmle M , Seuberlich T , Sharpe SR , Shi M , Sironi M , Smither S , Song JW , Spann KM , Spengler JR , Stenglein MD , Takada A , Tesh RB , Tkov J , Thornburg NJ , Tischler ND , Tomitaka Y , Tomonaga K , Tordo N , Tsunekawa K , Turina M , Tzanetakis IE , Vaira AM , vandenHoogen B , Vanmechelen B , Vasilakis N , Verbeek M , vonBargen S , Wada J , Wahl V , Walker PJ , Whitfield AE , Williams JV , Wolf YI , Yamasaki J , Yanagisawa H , Ye G , Zhang YZ , kland AL . Arch Virol 2022 167 (12) 2857-2906 |
| PgtE Enzyme of Salmonella enterica Shares the Similar Biological Roles to Plasminogen Activator (Pla) in Interacting With DEC-205 (CD205), and Enhancing Host Dissemination and Infectivity by Yersinia pestis.
Li Q , Ye C , Zhao F , Li W , Zhu S , Lv Y , Park CG , Zhang Y , Jiang LY , Yang K , He Y , Cai H , Zhang S , Ding HH , Njiri OA , Tembo JM , Alkraiem AA , Li AY , Sun ZY , Li W , Yan MY , Kan B , Huo X , Klena JD , Skurnik M , Anisimov AP , Gao X , Han Y , Yang RF , Xiamu X , Wang Y , Chen H , Chai B , Sun Y , Yuan J , Chen T . Front Immunol 2022 13 791799 |
| Identification of Prognostic and Chemopredictive microRNAs for Non-Small-Cell Lung Cancer by Integrating SEER-Medicare Data.
Ye Q , Putila J , Raese R , Dong C , Qian Y , Dowlati A , Guo NL . Int J Mol Sci 2021 22 (14) |
| Loss of the virulence plasmid by Shigella sonnei promotes its interactions with CD207 and CD209 receptors
Wu BC , Olivia NA , Tembo JM , He YX , Zhang YM , Xue Y , Ye CL , Lv Y , Li WJ , Jiang LY , Huo XX , Sun ZY , Chen ZJ , Qin JC , Li AY , Park CG , Klena JD , Ding HH , Chen T . J Med Microbiol 2021 70 (3) |
| Massively multiplexed nucleic acid detection using Cas13.
Ackerman CM , Myhrvold C , Thakku SG , Freije CA , Metsky HC , Yang DK , Ye SH , Boehm CK , Kosoko-Thoroddsen TF , Kehe J , Nguyen TG , Carter A , Kulesa A , Barnes JR , Dugan VG , Hung DT , Blainey PC , Sabeti PC . Nature 2020 582 (7811) 277-282
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| Molecular strain typing of the yaws pathogen, Treponema pallidum subspecies pertenue.
Katz SS , Chi KH , Nachamkin E , Danavall D , Taleo F , Kool JL , Addo KK , Ampofo W , Simpson SV , Ye T , Asiedu KB , Ballard RC , Chen CY , Pillay A . PLoS One 2018 13 (9) e0203632
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| Taxonomy of the order Mononegavirales: update 2018.
Amarasinghe GK , Arechiga Ceballos NG , Banyard AC , Basler CF , Bavari S , Bennett AJ , Blasdell KR , Briese T , Bukreyev A , Cai Y , Calisher CH , Campos Lawson C , Chandran K , Chapman CA , Chiu CY , Choi KS , Collins PL , Dietzgen RG , Dolja VV , Dolnik O , Domier LL , Durrwald R , Dye JM , Easton AJ , Ebihara H , Echevarria JE , Fooks AR , Formenty PBH , Fouchier RAM , Freuling CM , Ghedin E , Goldberg TL , Hewson R , Horie M , Hyndman TH , Jiang D , Kityo R , Kobinger GP , Kondo H , Koonin EV , Krupovic M , Kurath G , Lamb RA , Lee B , Leroy EM , Maes P , Maisner A , Marston DA , Mor SK , Muller T , Muhlberger E , Ramirez VMN , Netesov SV , Ng TFF , Nowotny N , Palacios G , Patterson JL , Paweska JT , Payne SL , Prieto K , Rima BK , Rota P , Rubbenstroth D , Schwemmle M , Siddell S , Smither SJ , Song Q , Song T , Stenglein MD , Stone DM , Takada A , Tesh RB , Thomazelli LM , Tomonaga K , Tordo N , Towner JS , Vasilakis N , Vazquez-Moron S , Verdugo C , Volchkov VE , Wahl V , Walker PJ , Wang D , Wang LF , Wellehan JFX , Wiley MR , Whitfield AE , Wolf YI , Ye G , Zhang YZ , Kuhn JH . Arch Virol 2018 163 (8) 2283-2294 |
| Decoding noises in HIV computational genotyping.
Jia M , Shaw T , Zhang X , Liu D , Shen Y , Ezeamama AE , Yang C , Zhang M . Virology 2017 511 249-255 |
| Neuraminidase-based recombinant virus-like particles protect against lethal avian influenza A(H5N1) virus infection in ferrets.
Smith GE , Sun X , Bai Y , Liu YV , Massare MJ , Pearce MB , Belser JA , Maines TR , Creager HM , Glenn GM , Flyer D , Pushko P , Levine MZ , Tumpey TM . Virology 2017 509 90-97 |
| Molecular epidemiology of hepatitis B virus infection in Tanzania.
Forbi JC , Dillon M , Purdy MA , Drammeh BS , Tejada-Strop A , McGovern D , Xia GL , Lin Y , Ganova-Raeva LM , Campo DS , Thai H , Vaughan G , Haule D , Kutaga RP , Basavaraju SV , Kamili S , Khudyakov YE . J Gen Virol 2017 98 (5) 1048-1057 |
| Taxonomy of the order Mononegavirales: update 2017.
Amarasinghe GK , Bao Y , Basler CF , Bavari S , Beer M , Bejerman N , Blasdell KR , Bochnowski A , Briese T , Bukreyev A , Calisher CH , Chandran K , Collins PL , Dietzgen RG , Dolnik O , Durrwald R , Dye JM , Easton AJ , Ebihara H , Fang Q , Formenty P , Fouchier RA , Ghedin E , Harding RM , Hewson R , Higgins CM , Hong J , Horie M , James AP , Jiang D , Kobinger GP , Kondo H , Kurath G , Lamb RA , Lee B , Leroy EM , Li M , Maisner A , Muhlberger E , Netesov SV , Nowotny N , Patterson JL , Payne SL , Paweska JT , Pearson MN , Randall RE , Revill PA , Rima BK , Rota P , Rubbenstroth D , Schwemmle M , Smither SJ , Song Q , Stone DM , Takada A , Terregino C , Tesh RB , Tomonaga K , Tordo N , Towner JS , Vasilakis N , Volchkov VE , Wahl-Jensen V , Walker PJ , Wang B , Wang D , Wang F , Wang LF , Werren JH , Whitfield AE , Yan Z , Ye G , Kuhn JH . Arch Virol 2017 162 (8) 2493-2504 |
| Comparison of the first three waves of avian influenza A(H7N9) virus circulation in the mainland of the People's Republic of China
Xiang N , Iuliano AD , Zhang Y , Ren R , Geng X , Ye B , Tu W , Li CA , Lv Y , Yang M , Zhao J , Wang Y , Yang F , Zhou L , Liu B , Shu Y , Ni D , Feng Z , Li Q . BMC Infect Dis 2016 16 (1) 734 |
| Cryptosporidium species and C. parvum subtypes in dairy calves and goat kids reared under traditional farming systems in Turkey.
Taylan-Ozkan A , Yasa-Duru S , Usluca S , Lysen C , Ye J , Roellig DM , Feng Y , Xiao L . Exp Parasitol 2016 170 16-20 |
| Next-Generation Sequencing Reveals Frequent Opportunities for Exposure to Hepatitis C Virus in Ghana.
Forbi JC , Layden JE , Phillips RO , Mora N , Xia GL , Campo DS , Purdy MA , Dimitrova ZE , Owusu DO , Punkova LT , Skums P , Owusu-Ofori S , Sarfo FS , Vaughan G , Roh H , Opare-Sem OK , Cooper RS , Khudyakov YE . PLoS One 2015 10 (12) e0145530 |
| An Insight into Recombination with Enterovirus Species C and Nucleotide G-480 Reversion from the Viewpoint of Neurovirulence of Vaccine-Derived Polioviruses.
Zhang Y , Yan D , Zhu S , Nishimura Y , Ye X , Wang D , Jorba J , Zhu H , An H , Shimizu H , Kew O , Xu W . Sci Rep 2015 5 17291 |
| Sequence specificity for uridylylation of the viral peptide linked to the genome (VPg) of enteroviruses.
Schein CH , Ye M , Paul AV , Oberste MS , Chapman N , van der Heden van Noort GJ , Filippov DV , Choi K . Virology 2015 484 80-85 |
| Dominance of Giardia duodenalis assemblage A and Enterocytozoon bieneusi genotype BEB6 in sheep in Inner Mongolia, China.
Ye J , Xiao L , Wang Y , Guo Y , Roellig DM , Feng Y . Vet Parasitol 2015 210 235-9 |
| A re-evaluation of the origin of hepatitis C virus genotype 2 in West Africa.
Purdy MA , Forbi JC , Sue A , Layden JE , Switzer WM , Opare-Sem OK , Phillips RO , Khudyakov YE . J Gen Virol 2015 96 (8) 2157-2164 |
| Identification and morphologic and molecular characterization of Cyclospora macacae n. sp. from rhesus monkeys in China.
Li N , Ye J , Arrowood MJ , Ma J , Wang L , Xu H , Feng Y , Xiao L . Parasitol Res 2015 114 (5) 1811-6 |
| Genetic characterization of Shigella flexneri isolates in Guizhou Province, China.
Li S , Sun Q , Wei X , Klena JD , Wang J , Liu Y , Tian K , Luo X , Ye C , Xu J , Wang D , Tang G . PLoS One 2015 10 (1) e0116708 |
| High frequency of active HCV infection among seropositive cases in west Africa and evidence for multiple transmission pathways.
Layden JE , Phillips RO , Owusu-Ofori S , Sarfo FS , Kliethermes S , Mora N , Owusu D , Nelson K , Opare-Sem O , Dugas L , Luke A , Shoham D , Forbi JC , Khudyakov YE , Cooper RS . Clin Infect Dis 2014 60 (7) 1033-41 |
| Molecular differentiation of Treponema pallidum subspecies in skin ulceration clinically suspected as yaws in Vanuatu using real-time multiplex PCR and serological methods.
Chi KH , Danavall D , Taleo F , Pillay A , Ye T , Nachamkin E , Kool JL , Fegan D , Asiedu K , Vestergaard LS , Ballard RC , Chen CY . Am J Trop Med Hyg 2014 92 (1) 134-8 |
| Outbreak of hepatitis A in the USA associated with frozen pomegranate arils imported from Turkey: an epidemiological case study.
Collier MG , Khudyakov YE , Selvage D , Adams-Cameron M , Epson E , Cronquist A , Jervis RH , Lamba K , Kimura AC , Sowadsky R , Hassan R , Park SY , Garza E , Elliott AJ , Rotstein DS , Beal J , Kuntz T , Lance SE , Dreisch R , Wise ME , Nelson NP , Suryaprasad A , Drobeniuc J , Holmberg SD , Xu F . Lancet Infect Dis 2014 14 (10) 976-81
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| Recent population expansions of hepatitis B virus in the United States.
Ramachandran S , Purdy MA , Xia GL , Campo DS , Dimitrova ZE , Teshale EH , Teo CG , Khudyakov YE . J Virol 2014 88 (24) 13971-80 |
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