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CDC-Authored Genomics and Precision Health Publications Database|Home|Public Health Genomics and Precision Health Knowledge Base (PHGKB)

CDC-Authored Genomics and Precision Health Publications Database


Last data update: Nov 04, 2024. (Total: 6390 publications)
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Records 1-30 (of 55 Records)
Query Trace: Wagner D[original query]
Sequence-matching adapter trimmers generate consistent quality and assembly metrics for Illumina sequencing of RNA viruses
Nabakooza G , Wagner DD , Momin N , Marine RL , Weldon WC , Oberste MS .
BMC Res Notes 2024 17 (1) 308 type
Shotgun proteomics of detergent-solubilized proteins from Trypanosoma evansi
Batista F , Moreira RS , Filho VB , Moura H , Wagner G , Miletti LC .
J Proteomics 2024 105231
Detection of Leptospira kirschneri in a short-beaked common dolphin (Delphinus delphis delphis) stranded off the coast of southern California, USA
Prager KC , Danil K , Wurster E , Colegrove KM , Galloway R , Kettler N , Mani R , McDonough RF , Sahl JW , Stone NE , Wagner DM , Lloyd-Smith JO .
BMC Vet Res 2024 20 (1) 266 type
A mutation associated with resistance to synthetic pyrethroids is widespread in US populations of the tropical lineage of Rhipicephalus sanguineus s.l
Stone NE , Ballard R , Bourgeois RM , Pemberton GL , McDonough RF , Ruby MC , Backus LH , López-Pérez AM , Lemmer D , Koch Z , Brophy M , Paddock CD , Kersh GJ , Nicholson WL , Sahl JW , Busch JD , Salzer JS , Foley JE , Wagner DM .
Ticks Tick Borne Dis 2024 15 (4) 102344 type
Pathogenic Leptospira are widespread in the urban wildlife of southern California
Helman SK , Tokuyama AFN , Mummah RO , Stone NE , Gamble MW , Snedden CE , Borremans B , Gomez ACR , Cox C , Nussbaum J , Tweedt I , Haake DA , Galloway RL , Monzón J , Riley SPD , Sikich JA , Brown J , Friscia A , Sahl JW , Wagner DM , Lynch JW , Prager KC , Lloyd-Smith JO .
Sci Rep 2023 13 (1) 14368
DNA capture and enrichment: A culture-independent approach for characterizing the genomic diversity of pathogenic leptospira species
Stone NE , McDonough RF , Hamond C , LeCount K , Busch JD , Dirsmith KL , Rivera-Garcia S , Soltero F , Arnold LM , Weiner Z , Galloway RL , Schlater LK , Nally JE , Sahl JW , Wagner DM .
Microorganisms 2023 11 (5) type
Human plague: An old scourge that needs new answers.
Vallès X , Stenseth NC , Demeure C , Horby P , Mead PS , Cabanillas O , Ratsitorahina M , Rajerison M , Andrianaivoarimanana V , Ramasindrazana B , Pizarro-Cerda J , Scholz HC , Girod R , Hinnebusch BJ , Vigan-Womas I , Fontanet A , Wagner DM , Telfer S , Yazdanpanah Y , Tortosa P , Carrara G , Deuve J , Belmain SR , D'Ortenzio E , Baril L .
PLoS Negl Trop Dis 2020 14 (8) e0008251 type
Burkholderia thailandensis Isolated from the Environment, United States.
Hall CM , Stone NE , Martz M , Hutton SM , Santana-Propper E , Versluis L , Guidry K , Ortiz M , Busch JD , Maness T , Stewart J , Sidwa T , Gee JE , Elrod MG , Petras JK , Ty MC , Gulvik C , Weiner ZP , Salzer JS , Hoffmaster AR , Rivera-Garcia S , Keim P , Kieffer A , Sahl JW , Soltero F , Wagner DM .
Emerg Infect Dis 2023 29 (3) 618-621 type
COVID-19 on the Nile: a cross-sectional investigation of COVID-19 among Nile River cruise travellers returning to the United States, February-march 2020.
Guagliardo SAJ , Quilter LAS , Uehara A , White SB , Talarico S , Tong S , Paden CR , Zhang J , Li Y , Pray I , Novak RT , Fukunaga R , Rodriguez A , Medley AM , Wagner R , Weinberg M , Brown CM , Friedman CR .
J Travel Med 2022 type
Patient reported impact of symptoms in amyotrophic lateral sclerosis (PRISM-ALS): A national, cross-sectional study.
Zizzi C , Seabury J , Rosero S , Alexandrou D , Wagner E , Weinstein JS , Varma A , Dilek N , Heatwole J , Wuu J , Caress J , Bedlack R , Granit V , Statland JM , Mehta P , Benatar M , Heatwole C .
EClinicalMedicine 2023 55 101768
Cluster of Norovirus Genogroup IX Outbreaks in Long-Term Care Facilities, Utah, USA, 2021.
Osborn B , Pan CY , Hatada A , Hatfield J , Wagner J , Oakeson K , Montmayeur A , Morales C , Vinj J .
Emerg Infect Dis 2022 28 (11) 2312-2315 type
MycoSNP: A Portable Workflow for Performing Whole-Genome Sequencing Analysis of Candida auris.
Bagal UR , Phan J , Welsh RM , Misas E , Wagner D , Gade L , Litvintseva AP , Cuomo CA , Chow NA .
Methods Mol Biol 2022 2517 215-228 type
Diverse lineages of pathogenic Leptospira species are widespread in the environment in Puerto Rico, USA.
Stone NE , Hall CM , Ortiz M , Hutton S , Santana-Propper E , Celona KR , Williamson CHD , Bratsch N , Fernandes LGV , Busch JD , Pearson T , Rivera-Garcia S , Soltero F , Galloway R , Sahl JW , Nally JE , Wagner DM .
PLoS Negl Trop Dis 2022 16 (5) e0009959 type
VPipe: an Automated Bioinformatics Platform for Assembly and Management of Viral Next-Generation Sequencing Data.
Wagner DD , Marine RL , Ramos E , Ng TFF , Castro CJ , Okomo-Adhiambo M , Harvey K , Doho G , Kelly R , Jain Y , Tatusov RL , Silva H , Rota PA , Khan AN , Oberste MS .
Microbiol Spectr 2022 10 (2) e0256421 type
Evaluating whole-genome sequencing quality metrics for enteric pathogen outbreaks.
Wagner DD , Carleton HA , Trees E , Katz LS .
PeerJ 2021 9 e12446 type
Horizontal Gene Transfer Is the Main Driver of Antimicrobial Resistance in Broiler Chicks Infected with Salmonella enterica Serovar Heidelberg.
Oladeinde A , Abdo Z , Press MO , Cook K , Cox NA , Zwirzitz B , Woyda R , Lakin SM , Thomas JC4th , Looft T , Cosby DE , Hinton AJr , Guard J , Line E , Rothrock MJ , Berrang ME , Herrington K , Zock G , Plumblee Lawrence J , Cudnik D , House S , Ingram K , Lariscy L , Wagner M , Aggrey SE , Chai L , Ritz C .
mSystems 2021 6 (4) e0072921 type
Exoproteomic analysis of two MLST clade 2 strains of Clostridioides difficile from Latin America reveal close similarities.
de Melo Pacífico D , Costa CL , Moura H , Barr JR , Maia GA , Filho VB , Moreira RS , Wagner G , Domingues Rmcp , Quesada-Gómez C , de Oliveira Ferreira E , de Castro Brito GA .
Sci Rep 2021 11 (1) 13273 type
Aztreonam-Avibactam Susceptibility Testing Program for Metallo-Beta-Lactamase-Producing Enterobacterales in the Antibiotic Resistance Laboratory Network, March 2019 to December 2020.
Bhatnagar A , Boyd S , Sabour S , Bodnar J , Nazarian E , Peinovich N , Wagner C , Craft B , Vagnone PS , Simpson J , Stone VN , Therrien M , Bateman A , Lower D , Huang JY , Gumbis S , Lonsway D , Lutgring JD , Karlsson M , Brown AC .
Antimicrob Agents Chemother 2021 65 (8) Aac0048621
Randomized Trial of a Vaccine Regimen to Prevent Chronic HCV Infection.
Page K , Melia MT , Veenhuis RT , Winter M , Rousseau KE , Massaccesi G , Osburn WO , Forman M , Thomas E , Thornton K , Wagner K , Vassilev V , Lin L , Lum PJ , Giudice LC , Stein E , Asher A , Chang S , Gorman R , Ghany MG , Liang TJ , Wierzbicki MR , Scarselli E , Nicosia A , Folgori A , Capone S , Cox AL .
N Engl J Med 2021 384 (6) 541-549 type
Hepatitis C virus infection and polysubstance use among young adult people who inject drugs in a rural county of New Mexico.
Wagner K , Zhong Y , Teshale E , White K , Winstanley EL , Hettema J , Thornton K , Bisztray B , Fiuty P , Page K .
Drug Alcohol Depend 2021 220 108527
Gen-FS coordinated proficiency test data for genomic foodborne pathogen surveillance, 2017 and 2018 exercises.
Timme RE , Lafon PC , Balkey M , Adams JK , Wagner D , Carleton H , Strain E , Hoffmann M , Sabol A , Rand H , Lindsey R , Sheehan D , Baugher JD , Trees E .
Sci Data 2020 7 (1) 402 type
Infection control response to an outbreak of OXA-23 carbapenemase-producing carbapenem-resistant Acinetobacter baumannii in a skilled nursing facility in Utah.
Smith AR , Vowles M , Horth RZ , Smith L , Rider L , Wagner JM , Sangster A , Young EL , Schuckel H , Stewart J , Gruninger RJ , Rossi A , Oakeson KF , Nakashima AK .
Am J Infect Control 2020 49 (6) 792-799
COVID-19 in Americans aboard the Diamond Princess cruise ship.
Plucinski MM , Wallace M , Uehara A , Kurbatova EV , Tobolowsky FA , Schneider ZD , Ishizumi A , Bozio CH , Kobayashi M , Toda M , Stewart A , Wagner RL , Moriarty LF , Murray R , Queen K , Tao Y , Paden C , Mauldin MR , Zhang J , Li Y , Elkins CA , Lu X , Herzig CTA , Novak R , Bower W , Medley AM , Acosta AM , Knust B , Cantey PT , Pesik NT , Halsey ES , Cetron MS , Tong S , Marston BJ , Friedman CR .
Clin Infect Dis 2020 72 (10) e448-e457 type
Potential antitumor activity of digitoxin and user-designed analog administered to human lung cancer cells.
Eldawud R , Wagner A , Dong C , Gupta N , Rojanasakul Y , O'Doherty G , Stueckle TA , Dinu CZ .
Biochim Biophys Acta Gen Subj 2020 1864 (11) 129683
Understanding the Emergence of Multidrug-Resistant Candida : Using Whole-Genome Sequencing to Describe the Population Structure of Candida haemulonii Species Complex.
Gade L , Munoz JF , Sheth M , Wagner D , Berkow EL , Forsberg K , Jackson BR , Ramos-Castro R , Escandon P , Dolande M , Ben-Ami R , Espinosa-Bode A , Caceres DH , Lockhart SR , Cuomo CA , Litvintseva AP .
Front Genet 2020 11 554 type
Public Health Responses to COVID-19 Outbreaks on Cruise Ships - Worldwide, February-March 2020.
Moriarty LF , Plucinski MM , Marston BJ , Kurbatova EV , Knust B , Murray EL , Pesik N , Rose D , Fitter D , Kobayashi M , Toda M , Canty PT , Scheuer T , Halsey ES , Cohen NJ , Stockman L , Wadford DA , Medley AM , Green G , Regan JJ , Tardivel K , White S , Brown C , Morales C , Yen C , Wittry B , Freeland A , Naramore S , Novak RT , Daigle D , Weinberg M , Acosta A , Herzig C , Kapella BK , Jacobson KR , Lamba K , Ishizumi A , Sarisky J , Svendsen E , Blocher T , Wu C , Charles J , Wagner R , Stewart A , Mead PS , Kurylo E , Campbell S , Murray R , Weidle P , Cetron M , Friedman CR .
MMWR Morb Mortal Wkly Rep 2020 69 (12) 347-352 type
International Society of Cardiovascular Infectious Diseases Guidelines for the Diagnosis, Treatment and Prevention of Disseminated Mycobacterium chimaera Infection Following Cardiac Surgery with Cardiopulmonary Bypass.
Hasse B , Hannan M , Keller PM , Maurer FP , Sommerstein R , Mertz D , Wagner D , Fernandez-Hidalgo N , Nomura J , Manfrin V , Bettex D , Conte AH , Durante-Mangoni E , Hing-Cheung Tang T , Stuart RL , Lundgren J , Gordon S , Jarashow MC , Schreiber PW , Niemann S , Kohl TA , Daley C , Stewardson AJ , Whitener CJ , Perkins K , Plachouras D , Lamagni T , Chand M , Freiberger T , Zweifel S , Sander P , Schulthess B , Scriven J , Sax H , van Ingen J , Mestres CA , Diekema D , Brown-Elliott BA , Wallace RJJr , Baddour LM , Miro JM , Hoen B .
J Hosp Infect 2019 104 (2) 214-235
Safety and immunogenicity of a multivalent HIV vaccine comprising envelope protein with either DNA or NYVAC vectors (HVTN 096): a phase 1b, double-blind, placebo-controlled trial.
Pantaleo G , Janes H , Karuna S , Grant S , Ouedraogo GL , Allen M , Tomaras GD , Frahm N , Montefiori DC , Ferrari G , Ding S , Lee C , Robb ML , Esteban M , Wagner R , Bart PA , Rettby N , McElrath MJ , Gilbert PB , Kublin JG , Corey L .
Lancet HIV 2019 6 (11) e737-e749 type
Burkholderia pseudomallei, the causative agent of melioidosis, is rare but ecologically established and widely dispersed in the environment in Puerto Rico.
Hall CM , Jaramillo S , Jimenez R , Stone NE , Centner H , Busch JD , Bratsch N , Roe CC , Gee JE , Hoffmaster AR , Rivera-Garcia S , Soltero F , Ryff K , Perez-Padilla J , Keim P , Sahl JW , Wagner DM .
PLoS Negl Trop Dis 2019 13 (9) e0007727 type
Sepsis Attributed to Bacterial Contamination of Platelets Associated with a Potential Common Source - Multiple States, 2018.
Jones SA , Jones JM , Leung V , Nakashima AK , Oakeson KF , Smith AR , Hunter R , Kim JJ , Cumming M , McHale E , Young PP , Fridey JL , Kelley WE , Stramer SL , Wagner SJ , West FB , Herron R , Snyder E , Hendrickson JE , Peaper DR , Gundlapalli AV , Langelier C , Miller S , Nambiar A , Moayeri M , Kamm J , Moulton-Meissner H , Annambhotla P , Gable P , McAllister GA , Breaker E , Sula E , Halpin AL , Basavaraju SV .
MMWR Morb Mortal Wkly Rep 2019 68 (23) 519-523 type
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