CDC-Authored Genomics and Precision Health Publications Database
Last data update: Nov 04, 2024. (Total: 6390 publications)
| Query Trace: Shrestha S[original query] |
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| Moving beyond wastewater: Perspectives on environmental surveillance of infectious diseases for public health action in low-resource settings
Delgado Vela J , Philo SE , Brown J , Taniuchi M , Cantrell M , Kossik A , Ramaswamy M , Ajjampur SS , Guerfali FZ , Holm RH , Meschke JS , Otero MCB , Pickering AJ , Rahman M , Shaw AG , Shrestha A , Sirikanchana K , Tevuzula VM , Halden RU , Boehm AB , Bibby K . Environ Health 2024 
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| Global diversity and antimicrobial resistance of typhoid fever pathogens: Insights from a meta-analysis of 13,000 Salmonella Typhi genomes
Carey ME , Dyson ZA , Ingle DJ , Amir A , Aworh MK , Chattaway MA , Chew KL , Crump JA , Feasey NA , Howden BP , Keddy KH , Maes M , Parry CM , Van Puyvelde S , Webb HE , Afolayan AO , Alexander AP , Anandan S , Andrews JR , Ashton PM , Basnyat B , Bavdekar A , Bogoch II , Clemens JD , da Silva KE , De A , de Ligt J , Diaz Guevara PL , Dolecek C , Dutta S , Ehlers MM , Francois Watkins L , Garrett DO , Godbole G , Gordon MA , Greenhill AR , Griffin C , Gupta M , Hendriksen RS , Heyderman RS , Hooda Y , Hormazabal JC , Ikhimiukor OO , Iqbal J , Jacob JJ , Jenkins C , Jinka DR , John J , Kang G , Kanteh A , Kapil A , Karkey A , Kariuki S , Kingsley RA , Koshy RM , Lauer AC , Levine MM , Lingegowda RK , Luby SP , Mackenzie GA , Mashe T , Msefula C , Mutreja A , Nagaraj G , Nagaraj S , Nair S , Naseri TK , Nimarota-Brown S , Njamkepo E , Okeke IN , Perumal SPB , Pollard AJ , Pragasam AK , Qadri F , Qamar FN , Rahman SIA , Rambocus SD , Rasko DA , Ray P , Robins-Browne R , Rongsen-Chandola T , Rutanga JP , Saha SK , Saha S , Saigal K , Sajib MSI , Seidman JC , Shakya J , Shamanna V , Shastri J , Shrestha R , Sia S , Sikorski MJ , Singh A , Smith AM , Tagg KA , Tamrakar D , Tanmoy AM , Thomas M , Thomas MS , Thomsen R , Thomson NR , Tupua S , Vaidya K , Valcanis M , Veeraraghavan B , Weill FX , Wright J , Dougan G , Argimón S , Keane JA , Aanensen DM , Baker S , Holt KE . Elife 2023 12
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| Cryptic transmission of SARS-CoV-2 in Washington State.
Bedford T , Greninger AL , Roychoudhury P , Starita LM , Famulare M , Huang ML , Nalla A , Pepper G , Reinhardt A , Xie H , Shrestha L , Nguyen TN , Adler A , Brandstetter E , Cho S , Giroux D , Han PD , Fay K , Frazar CD , Ilcisin M , Lacombe K , Lee J , Kiavand A , Richardson M , Sibley TR , Truong M , Wolf CR , Nickerson DA , Rieder MJ , Englund JA , Hadfield J , Hodcroft EB , Huddleston J , Moncla LH , Müller NF , Neher RA , Deng X , Gu W , Federman S , Chiu C , Duchin J , Gautom R , Melly G , Hiatt B , Dykema P , Lindquist S , Queen K , Tao Y , Uehara A , Tong S , MacCannell D , Armstrong GL , Baird GS , Chu HY , Shendure J , Jerome KR . medRxiv 2020
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| Quantifying Mycobacterium tuberculosis transmission dynamics across global settings: a systematic analysis.
Smith J , Cohen T , Dowdy D , Shrestha S , Gandhi NR , Hill AN . Am J Epidemiol 2022 192 (1) 133-145
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| Effect of childhood vaccination and antibiotic use on pneumococcal populations and genome-wide associations with disease among children in Nepal: an observational study.
Kandasamy R , Lo S , Gurung M , Carter MJ , Gladstone R , Lees J , Shrestha S , Thorson S , Bijukchhe S , Gautam MC , Shrestha R , Gurung S , Khadka B , McGee L , Breiman RF , Murdoch DR , Kelly DF , Shrestha S , Bentley SD , Pollard AJ . Lancet Microbe 2022 3 (7) e503-e511
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| Concurrent outbreaks of circulating vaccine-derived poliovirus types 1 and 2 affecting the Republic of the Philippines and Malaysia, 2019-2021.
Snider CJ , Boualam L , Tallis G , Takashima Y , Abeyasinghe R , Lo YR , Grabovac V , Avagyan T , Aslam SK , Eltayeb AO , Aung KD , Wang X , Shrestha A , Ante-Orozco C , Silva MWT , Lapastora-Sucaldito N , Apostol LNG , Jikal MBH , Miraj W , Lodhi F , Kim HJ , Rusli N , Thorley BR , Kaye MB , Nishimura Y , Arita M , Sani JAM , Rundi C , Feldon K . Vaccine 2022 41 Suppl 1 A58-A69
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| Model-based analysis of tuberculosis genotype clusters in the United States reveals high degree of heterogeneity in transmission, and state-level differences across California, Florida, New York, and Texas.
Shrestha S , Winglee K , Hill A , Shaw T , Smith J , Kammerer JS , Silk BJ , Marks S , Dowdy D . Clin Infect Dis 2022 75 (8) 1433-1441
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| Associations Between Eight Earth Observation-Derived Climate Variables and Enteropathogen Infection: An Independent Participant Data Meta-Analysis of Surveillance Studies With Broad Spectrum Nucleic Acid Diagnostics.
Colston JM , Zaitchik BF , Badr HS , Burnett E , Ali SA , Rayamajhi A , Satter SM , Eibach D , Krumkamp R , May J , Chilengi R , Howard LM , Sow SO , JahangirHossain M , Saha D , ImranNisar M , Zaidi AKM , Kanungo S , Mandomando I , Faruque ASG , Kotloff KL , Levine MM , Breiman RF , Omore R , Page N , Platts-Mills JA , Ashorn U , Fan YM , Shrestha PS , Ahmed T , Mduma E , Yori PP , Bhutta Z , Bessong P , Olortegui MP , Lima AAM , Kang G , Humphrey J , Prendergast AJ , Ntozini R , Okada K , Wongboot W , Gaensbauer J , Melgar MT , Pelkonen T , Freitas CM , Kosek MN . Geohealth 2022 6 (1) e2021GH000452 |
| The Longitudinal Epidemiologic Assessment of Diabetes Risk (LEADR): Unique 1.4 M patient Electronic Health Record cohort.
Fishbein HA , Birch RJ , Mathew SM , Sawyer HL , Pulver G , Poling J , Kaelber D , Mardon R , Johnson MC , Pace W , Umbel KD , Zhang X , Siegel KR , Imperatore G , Shrestha S , Proia K , Cheng Y , McKeever Bullard K , Gregg EW , Rolka D , Pavkov ME . Healthc (Amst) 2020 8 (4) 100458 |
| Cryptic transmission of SARS-CoV-2 in Washington state.
Bedford T , Greninger AL , Roychoudhury P , Starita LM , Famulare M , Huang ML , Nalla A , Pepper G , Reinhardt A , Xie H , Shrestha L , Nguyen TN , Adler A , Brandstetter E , Cho S , Giroux D , Han PD , Fay K , Frazar CD , Ilcisin M , Lacombe K , Lee J , Kiavand A , Richardson M , Sibley TR , Truong M , Wolf CR , Nickerson DA , Rieder MJ , Englund JA , Hadfield J , Hodcroft EB , Huddleston J , Moncla LH , Müller NF , Neher RA , Deng X , Gu W , Federman S , Chiu C , Duchin JS , Gautom R , Melly G , Hiatt B , Dykema P , Lindquist S , Queen K , Tao Y , Uehara A , Tong S , MacCannell D , Armstrong GL , Baird GS , Chu HY , Shendure J , Jerome KR . Science 2020 370 (6516) 571-575
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| Dense genotyping of immune-related loci identifies variants associated with clearance of HPV among HIV-positive women in the HIV epidemiology research study (HERS).
Sudenga SL , Wiener HW , King CC , Rompalo AM , Cu-Uvin S , Klein RS , Shah KV , Sobel JD , Jamieson DJ , Shrestha S . PLoS One 2014 9 (6) e99109 |
| Costs and outcomes of laboratory diagnostic algorithms for the detection of HIV
Hutchinson AB , Ethridge SF , Wesolowski LG , Shrestha RK , Pentella M , Bennett B , Farnham PG , Sullivan T , Patel P , Branson BM . J Clin Virol 2013 58 Suppl 1 e2-7 |
| A genome-wide association study of host genetic determinants of the antibody response to Anthrax Vaccine Adsorbed.
Pajewski NM , Shrestha S , Quinn CP , Parker SD , Wiener H , Aissani B , McKinney BA , Poland GA , Edberg JC , Kimberly RP , Tang J , Kaslow RA . Vaccine 2012 30 (32) 4778-84 |
| Common occurrence of a unique Cryptosporidium ryanae variant in zebu cattle and water buffaloes in the buffer zone of the Chitwan National Park, Nepal
Feng Y , Raj Karna S , Dearen TK , Singh DK , Adhikari LN , Shrestha A , Xiao L . Vet Parasitol 2012 185 309-14 |
| Genetic diversity of Thottapalayam virus, a hantavirus harbored by the Asian house shrew (Suncus murinus) in Nepal
Kang HJ , Kosoy MY , Shrestha SK , Shrestha MP , Pavlin JA , Gibbons RV , Yanagihara R . Am J Trop Med Hyg 2011 85 (3) 540-545 |
| The influence of human leukocyte antigen class I alleles and their population frequencies on human immunodeficiency virus type 1 control among African Americans
Lazaryan A , Song W , Lobashevsky E , Tang J , Shrestha S , Zhang K , McNicholl JM , Gardner LI , Wilson CM , Klein RS , Rompalo A , Mayer K , Sobel J , Kaslow RA . Hum Immunol 2011 72 (4) 312-8 |
| Prevalence and genetic diversity of Bartonella detected in different tissues of small mammals of Nepal
Gundi VA , Kosoy MY , Myint KS , Shrestha SK , Shrestha MP , Pavlin JA , Gibbons RV . Appl Environ Microbiol 2010 76 (24) 8247-54 |
| Human leukocyte antigen class I supertypes and HIV-1 control in African Americans
Lazaryan A , Song W , Lobashevsky E , Tang J , Shrestha S , Zhang K , Gardner LI , McNicholl JM , Wilson CM , Klein RS , Rompalo A , Mayer K , Sobel J , Kaslow Richard A , HIV Epidemiology Research Study , Reaching for Excellence in Adolescent Care and Health Study . J Virol 2009 84 (5) 2610-7 |
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