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Public Health Genomics and Precision Health Knowledge Base (v10.0)
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CDC-Authored Genomics and Precision Health Publications Database|Home|Public Health Genomics and Precision Health Knowledge Base (PHGKB)
CDC-Authored Genomics and Precision Health Publications Database
Last data update: Sep 03, 2024
. (Total: 6282 publications)
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Records 1-30 (of 52 Records)
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Sheth M[original query]
The frequency and function of nucleoprotein-specific CD8(+) T cells are critical for heterosubtypic immunity against influenza virus infection
Amoah S
,
Cao W
,
Sayedahmed EE ,
Wang Y
,
Kumar A
,
Mishina M
,
Eddins DJ
,
Wang WC ,
Burroughs M
,
Sheth M
,
Lee J
,
Shieh WJ
,
Ray SD ,
Bohannon CD
,
Ranjan P
,
Sharma SD
,
Hoehner J , Arthur RA ,
Gangappa S
,
Wakamatsu N , Johnston HR ,
Pohl J
,
Mittal SK ,
Sambhara S
.
J Virol 2024 e0071124
Antigenic characterization of circulating and emerging SARS-CoV-2 variants in the U.S. Throughout the Delta to Omicron waves
Di H
,
Pusch EA
,
Jones J
,
Kovacs NA
,
Hassell N
,
Sheth M
,
Lynn KS
,
Keller MW
,
Wilson MM
,
Keong LM
,
Cui D
,
Park SH
,
Chau R
,
Lacek KA
,
Liddell JD
,
Kirby MK
,
Yang G
,
Johnson M
,
Thor S
,
Zanders N
,
Feng C
,
Surie D
,
DeCuir J
,
Lester SN
,
Atherton L
,
Hicks H
,
Tamin A
,
Harcourt JL
,
Coughlin MM
,
Self WH , Rhoads JP , Gibbs KW , Hager DN , Shapiro NI , Exline MC , Lauring AS ,
Rambo-Martin B
,
Paden CR
,
Kondor RJ
,
Lee JS
,
Barnes JR
,
Thornburg NJ
,
Zhou B
,
Wentworth DE
,
Davis CT
.
Vaccines (Basel) 2024 12 (5)
Correction for Weigand et al., Complete Genome Sequences of Two Bordetella hinzii Strains Isolated from Humans.
Weigand MR
,
Changayil S
,
Kulasekarapandian Y
,
Batra D
,
Loparev V
,
Juieng P
,
Rowe L
,
Sheth M
,
Davis JK
,
Tondella ML
.
Genome Announc 2016 4 (1)
Targeted amplification and genetic sequencing of the severe acute respiratory syndrome coronavirus 2 surface glycoprotein
Keller MW
,
Keong LM
,
Rambo-Martin BL
,
Hassell N
,
Lacek KA
,
Wilson MM
,
Kirby MK
,
Liddell J
,
Owuor DC
,
Sheth M
,
Madden J
,
Lee JS
,
Kondor RJ
,
Wentworth DE
,
Barnes JR
.
Microbiol Spectr 2023 e0298223
Genomic surveillance for SARS-CoV-2 variants: Circulation of Omicron lineages - United States, January 2022-May 2023
Ma KC
,
Shirk P
,
Lambrou AS
,
Hassell N
,
Zheng XY
,
Payne AB
,
Ali AR
,
Batra D
,
Caravas J
,
Chau R
,
Cook PW
,
Howard D
,
Kovacs NA
,
Lacek KA
,
Lee JS
,
MacCannell DR
,
Malapati L
,
Mathew S
,
Mittal N
,
Nagilla RR
,
Parikh R
,
Paul P
,
Rambo-Martin BL
,
Shepard SS
,
Sheth M
,
Wentworth DE
,
Winn A
,
Hall AJ
,
Silk BJ
,
Thornburg N
,
Kondor R
,
Scobie HM
,
Paden CR
.
MMWR Morb Mortal Wkly Rep 2023 72 (24) 651-656
Transmission potential of vaccinated and unvaccinated persons infected with the SARS-CoV-2 Delta variant in a federal prison, July-August 2021.
Salvatore PP
,
Lee CC
,
Sleweon S
,
McCormick DW
,
Nicolae L
,
Knipe K
,
Dixon T , Banta R , Ogle I , Young C , Dusseau C , Salmonson S , Ogden C , Godwin E , Ballom T , Rhodes T ,
Wynn NT
,
David E
,
Bessey TK
,
Kim G
,
Suppiah S
,
Tamin A
,
Harcourt JL
,
Sheth M
,
Lowe L
,
Browne H
,
Tate JE
,
Kirking HL
,
Hagan LM
.
Vaccine 2022 41 (11) 1808-1818
The first complete genome of the simian malaria parasite Plasmodium brasilianum.
Bajic M
,
Ravishankar S ,
Sheth M
,
Rowe LA
,
Pacheco MA , Patel DS ,
Batra D
,
Loparev V
,
Olsen C , Escalante AA , Vannberg F ,
Udhayakumar V
,
Barnwell JW
,
Talundzic E
.
Sci Rep 2022 12 (1) 19802
SARS-CoV-2 Delta-Omicron Recombinant Viruses, United States.
Lacek KA
,
Rambo-Martin BL
,
Batra D
,
Zheng XY
,
Hassell N
,
Sakaguchi H , Peacock T , Groves N ,
Keller M
,
Wilson MM
,
Sheth M
,
Davis ML
,
Borroughs M
,
Gerhart J
,
Shepard SS
,
Cook PW
,
Lee J
,
Wentworth DE
,
Barnes JR
,
Kondor R
,
Paden CR
.
Emerg Infect Dis 2022 28 (7) 1442-1445
Differential neutralization and inhibition of SARS-CoV-2 variants by antibodies elicited by COVID-19 mRNA vaccines.
Wang L
,
Kainulainen MH
,
Jiang N
,
Di H
,
Bonenfant G
,
Mills L
,
Currier M
,
Shrivastava-Ranjan P
,
Calderon BM
,
Sheth M
,
Mann BR
,
Hossain J
,
Lin X
,
Lester S
,
Pusch EA
,
Jones J
,
Cui D
,
Chatterjee P
,
Jenks MH
,
Morantz EK
,
Larson GP
,
Hatta M
,
Harcourt JL
,
Tamin A
,
Li Y
,
Tao Y
,
Zhao K
,
Lacek K
,
Burroughs A
,
Wang W
,
Wilson M
,
Wong T
,
Park SH
,
Tong S
,
Barnes JR
,
Tenforde MW
,
Self WH , Shapiro NI , Exline MC , Files DC , Gibbs KW , Hager DN ,
Patel M
,
Halpin AL
,
McMullan LK
,
Lee JS
,
Xia H , Xie X , Shi PY ,
Davis CT
,
Spiropoulou CF
,
Thornburg NJ
,
Oberste MS
,
Dugan VG
,
Wentworth DE
,
Zhou B
.
Nat Commun 2022 13 (1) 4350
Selective Whole-Genome Amplification as a Tool to Enrich Specimens with Low Treponema pallidum Genomic DNA Copies for Whole-Genome Sequencing.
Thurlow CM
,
Joseph SJ
,
Ganova-Raeva L
,
Katz SS
,
Pereira L
,
Chen C
,
Debra A
,
Vilfort K
,
Workowski K
,
Cohen SE , Reno H ,
Sun Y
,
Burroughs M
,
Sheth M
,
Chi KH
,
Danavall D
,
Philip SS ,
Cao W
,
Kersh EN
,
Pillay A
.
mSphere 2022 7 (3) e0000922
Sentinel Surveillance Reveals Emerging Daptomycin-Resistant ST736 Enterococcus faecium and Multiple Mechanisms of Linezolid Resistance in Enterococci in the United States.
Gargis AS
,
Spicer LM
,
Kent AG
,
Zhu W
,
Campbell D
,
McAllister G
,
Ewing TO
,
Albrecht V
,
Stevens VA
,
Sheth M
,
Padilla J
,
Batra D
,
Johnson JK ,
Halpin AL
,
Rasheed JK
,
Elkins CA
,
Karlsson M
,
Lutgring JD
.
Front Microbiol 2021 12 807398
Genomic Surveillance for SARS-CoV-2 Variants: Predominance of the Delta (B.1.617.2) and Omicron (B.1.1.529) Variants - United States, June 2021-January 2022.
Lambrou AS
,
Shirk P
,
Steele MK
,
Paul P
,
Paden CR
,
Cadwell B
,
Reese HE
,
Aoki Y
,
Hassell N
,
Caravas J
,
Kovacs NA
,
Gerhart JG ,
Ng HJ
,
Zheng XY ,
Beck A
,
Chau R
,
Cintron R
,
Cook PW
,
Gulvik CA
,
Howard D
,
Jang Y
,
Knipe K
,
Lacek KA
,
Moser KA ,
Paskey AC
,
Rambo-Martin BL
,
Nagilla RR ,
Rethchless AC
,
Schmerer MW
,
Seby S
,
Shephard SS
,
Stanton RA
,
Stark TJ
,
Uehara A
,
Unoarumhi Y
,
Bentz ML
,
Burhgin A
,
Burroughs M
,
Davis ML
,
Keller MW
,
Keong LM ,
Le SS
,
Lee JS
,
Madden Jr JC
,
Nobles S
,
Owouor DC
,
Padilla J
,
Sheth M
,
Wilson MM
,
Talarico S
,
Chen JC
,
Oberste MS
,
Batra D
,
McMullan LK
,
Halpin AL
,
Galloway SE
,
MacCannell DR
,
Kondor R
,
Barnes J
,
MacNeil A
,
Silk BJ
,
Dugan VG
,
Scobie HM
,
Wentworth DE
.
MMWR Morb Mortal Wkly Rep 2022 71 (6) 206-211
Analysis of the initial lot of the CDC 2019-Novel Coronavirus (2019-nCoV) real-time RT-PCR diagnostic panel.
Lee JS
,
Goldstein JM
,
Moon JL
,
Herzegh O
,
Bagarozzi DAJr
,
Oberste MS
,
Hughes H
,
Bedi K
,
Gerard D
,
Cameron B
,
Benton C
,
Chida A
,
Ahmad A
,
Petway DJJr
,
Tang X
,
Sulaiman N
,
Teklu D
,
Batra D
,
Howard D
,
Sheth M
,
Kuhnert W
,
Bialek SR
,
Hutson CL
,
Pohl J
,
Carroll DS
.
PLoS One 2021 16 (12) e0260487
Comprehensive characterization of internal and cuticle surface microbiota of laboratory-reared F Anopheles albimanus originating from different sites.
Dada N
,
Benedict AC , López F , Lol JC ,
Sheth M
,
Dzuris N
,
Padilla N ,
Lenhart A
.
Malar J 2021 20 (1) 414
Complete Genome Sequence of Rhodococcus sp. Strain W8901, a Human Clinical Specimen, Assembled Using MiSeq and MinION Sequence Data.
Gulvik CA
,
Batra D
,
Howard DT
,
Sheth M
,
Humrighouse BW
,
Lee J
,
McQuiston JR
,
Lasker BA
.
Microbiol Resour Announc 2021 10 (35) e0061321
Chromosome-Level Genome Sequence of Leishmania (Leishmania) tropica Strain CDC216-162, Isolated from an Afghanistan Clinical Case.
Unoarumhi Y ,
Batra D
,
Sheth M
,
Narayanan V
,
Lin W
,
Zheng Y
,
Rowe LA
,
Pohl J
,
de Almeida M
.
Microbiol Resour Announc 2021 10 (20)
Draft Chromosome Sequences of a Clinical Isolate of the Free-Living Ameba Naegleria fowleri.
Ali IKM
,
Kelley A
,
Joseph SJ
,
Park S
,
Roy S
,
Jackson J
,
Cope JR
,
Rowe LA
,
Burroughs M
,
Sheth M
,
Batra D
,
Loparev V
.
Microbiol Resour Announc 2021 10 (15)
Complete and Circularized Bacterial Genome Sequence of Gordonia sp. Strain X0973
Gulvik CA
,
Batra D
,
Rowe LA
,
Sheth M
,
Nobles S
,
Lee JS
,
McQuiston JR
,
Lasker BA
.
Microbiol Resour Announc 2021 10 (9)
Development of a new barcode-based, multiplex-PCR, next-generation-sequencing assay and data processing and analytical pipeline for multiplicity of infection detection of Plasmodium falciparum.
Mitchell RM
,
Zhou Z
,
Sheth M
,
Sergent S
,
Frace M
,
Nayak V
,
Hu B
,
Gimnig J
,
Ter Kuile F ,
Lindblade K
,
Slutsker L
,
Hamel MJ
,
Desai M
,
Otieno K , Kariuki S , Vigfusson Y ,
Shi YP
.
Malar J 2021 20 (1) 92
Western Kenyan Anopheles gambiae showing intense permethrin resistance harbour distinct microbiota.
Omoke D , Kipsum M , Otieno S , Esalimba E ,
Sheth M
,
Lenhart A
,
Njeru EM , Ochomo E , Dada N .
Malar J 2021 20 (1) 77
Genomic Diversity of Burkholderia pseudomallei in Ceara, Brazil.
Gee JE
,
Gulvik CA
,
Castelo-Branco Dscm , Sidrim JJC , Rocha MFG , Cordeiro RA , Brilhante RSN , Bandeira Tjpg , Patrício I , Alencar LP , da Costa Ribeiro AK ,
Sheth M
,
Deka MA
,
Hoffmaster AR
,
Rolim D .
mSphere 2021 6 (1)
Complete and Circularized Genome Assemblies of the Kroppenstedtia eburnea Genus Type Strain and the Kroppenstedtia pulmonis Species Type Strain with MiSeq and MinION Sequence Data.
Gulvik CA
,
Batra D
,
Rowe LA
,
Sheth M
,
Humrighouse BW
,
Howard DT
,
Lee J
,
McQuiston JR
,
Lasker BA
.
Microbiol Resour Announc 2020 9 (44)
Division of the genus Chryseobacterium: Observation of discontinuities in amino acid identity values, a possible consequence of major extinction events, guides transfer of nine species to the genus Epilithonimonas , eleven species to the genus Kaistella , and three species to the genus Halpernia gen. nov., with description of Kaistella daneshvariae sp. nov. and Epilithonimonas vandammei sp. nov. derived from clinical specimens.
Nicholson AC
,
Gulvik CA
,
Whitney AM
,
Humrighouse BW
,
Bell ME
,
Holmes B ,
Steigerwalt AG
,
Villarma A
,
Sheth M
,
Batra D
,
Rowe LA
,
Burroughs M
,
Pryor JC
,
Bernardet JF , Hugo C , Kämpfer P , Newman JD ,
McQuiston JR
.
Int J Syst Evol Microbiol 2020 70 (8) 4432-4450
Understanding the Emergence of Multidrug-Resistant Candida : Using Whole-Genome Sequencing to Describe the Population Structure of Candida haemulonii Species Complex.
Gade L
,
Munoz JF ,
Sheth M
,
Wagner D
,
Berkow EL
,
Forsberg K
,
Jackson BR
,
Ramos-Castro R , Escandon P , Dolande M , Ben-Ami R ,
Espinosa-Bode A
,
Caceres DH
,
Lockhart SR
,
Cuomo CA ,
Litvintseva AP
.
Front Genet 2020 11 554
Conserved Patterns of Symmetric Inversion in the Genome Evolution of Bordetella Respiratory Pathogens.
Weigand MR
,
Peng Y
,
Batra D
,
Burroughs M
,
Davis JK
,
Knipe K
,
Loparev VN
,
Johnson T
,
Juieng P
,
Rowe LA
,
Sheth M
,
Tang K
,
Unoarumhi Y
,
Williams MM
,
Tondella ML
.
mSystems 2019 4 (6)
Pyrethroid exposure alters internal and cuticle surface bacterial communities in Anopheles albimanus.
Dada N
,
Lol JC , Benedict AC , Lopez F ,
Sheth M
,
Dzuris N
,
Padilla N ,
Lenhart A
.
ISME J 2019 13 (10) 2447-2464
Draft Genome Sequences of Leishmania ( Leishmania ) amazonensis , Leishmania ( Leishmania ) mexicana , and Leishmania ( Leishmania ) aethiopica , Potential Etiological Agents of Diffuse Cutaneous Leishmaniasis.
Batra D
,
Lin W
,
Narayanan V
,
Rowe LA
,
Sheth M
,
Zheng Y
,
Loparev V
,
de Almeida M
.
Microbiol Resour Announc 2019 8 (20)
First Draft Genome Sequence of Leishmania (Viannia) lainsoni Strain 216-34, Isolated from a Peruvian Clinical Case.
Lin W
,
Batra D
,
Narayanan V
,
Rowe LA
,
Sheth M
,
Zheng Y
,
Juieng P
,
Loparev V
,
de Almeida M
.
Microbiol Resour Announc 2019 8 (6)
Draft Genome Sequence of French Guiana Leishmania ( Viannia ) guyanensis Strain 204-365, Assembled Using Long Reads.
Batra D ,
Lin W
,
Rowe LA , Sheth M ,
Zheng Y
,
Loparev V ,
de Almeida M
.
Microbiol Resour Announc 2018 7 (23)
PacBio Genome Sequences of Escherichia coli Serotype O157:H7, Diffusely Adherent E. coli , and Salmonella enterica Strains, All Carrying Plasmids with an mcr-1 Resistance Gene.
Lindsey RL
,
Batra D
,
Smith P
,
Patel PN
,
Tagg KA ,
Garcia-Toledo L
,
Loparev VN
,
Juieng P
,
Sheth M
,
Joung YJ
,
Rowe LA
.
Microbiol Resour Announc 2018 7 (14)
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Page last reviewed:
Feb 1, 2024
Content source:
Public Health Genomics Branch in the Division of Blood Disorders and Public Health Genomics
,
National Center on Birth Defects and Developmental Disabilities
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