CDC-Authored Genomics and Precision Health Publications Database

---

Last data update: Sep 29, 2023. (Total: 4422 publications since 2011)

All Cancer Diabetes Economic Equity Environmental FHH HLBS ID Implementation ND PGx PI Rare RCH dataset

Filtered By: Select to fine-tune your search CDC Author Year Journal

Next

Records 1-30 (of 48 Records)

Query Trace: Sheth M[original query]
Genomic surveillance for SARS-CoV-2 variants: Circulation of Omicron lineages - United States, January 2022-May 2023 Ma KC , Shirk P , Lambrou AS , Hassell N , Zheng XY , Payne AB , Ali AR , Batra D , Caravas J , Chau R , Cook PW , Howard D , Kovacs NA , Lacek KA , Lee JS , MacCannell DR , Malapati L , Mathew S , Mittal N , Nagilla RR , Parikh R , Paul P , Rambo-Martin BL , Shepard SS , Sheth M , Wentworth DE , Winn A , Hall AJ , Silk BJ , Thornburg N , Kondor R , Scobie HM , Paden CR . MMWR Morb Mortal Wkly Rep 2023 72 (24) 651-656
Transmission potential of vaccinated and unvaccinated persons infected with the SARS-CoV-2 Delta variant in a federal prison, July-August 2021. Salvatore PP , Lee CC , Sleweon S , McCormick DW , Nicolae L , Knipe K , Dixon T , Banta R , Ogle I , Young C , Dusseau C , Salmonson S , Ogden C , Godwin E , Ballom T , Rhodes T , Wynn NT , David E , Bessey TK , Kim G , Suppiah S , Tamin A , Harcourt JL , Sheth M , Lowe L , Browne H , Tate JE , Kirking HL , Hagan LM . Vaccine 2022
The first complete genome of the simian malaria parasite Plasmodium brasilianum. Bajic M , Ravishankar S , Sheth M , Rowe LA , Pacheco MA , Patel DS , Batra D , Loparev V , Olsen C , Escalante AA , Vannberg F , Udhayakumar V , Barnwell JW , Talundzic E . Sci Rep 2022 12 (1) 19802
SARS-CoV-2 Delta-Omicron Recombinant Viruses, United States. Lacek KA , Rambo-Martin BL , Batra D , Zheng XY , Hassell N , Sakaguchi H , Peacock T , Groves N , Keller M , Wilson MM , Sheth M , Davis ML , Borroughs M , Gerhart J , Shepard SS , Cook PW , Lee J , Wentworth DE , Barnes JR , Kondor R , Paden CR . Emerg Infect Dis 2022 28 (7) 1442-1445
Differential neutralization and inhibition of SARS-CoV-2 variants by antibodies elicited by COVID-19 mRNA vaccines. Wang L , Kainulainen MH , Jiang N , Di H , Bonenfant G , Mills L , Currier M , Shrivastava-Ranjan P , Calderon BM , Sheth M , Mann BR , Hossain J , Lin X , Lester S , Pusch EA , Jones J , Cui D , Chatterjee P , Jenks MH , Morantz EK , Larson GP , Hatta M , Harcourt JL , Tamin A , Li Y , Tao Y , Zhao K , Lacek K , Burroughs A , Wang W , Wilson M , Wong T , Park SH , Tong S , Barnes JR , Tenforde MW , Self WH , Shapiro NI , Exline MC , Files DC , Gibbs KW , Hager DN , Patel M , Halpin AL , McMullan LK , Lee JS , Xia H , Xie X , Shi PY , Davis CT , Spiropoulou CF , Thornburg NJ , Oberste MS , Dugan VG , Wentworth DE , Zhou B . Nat Commun 2022 13 (1) 4350
Selective Whole-Genome Amplification as a Tool to Enrich Specimens with Low Treponema pallidum Genomic DNA Copies for Whole-Genome Sequencing. Thurlow CM , Joseph SJ , Ganova-Raeva L , Katz SS , Pereira L , Chen C , Debra A , Vilfort K , Workowski K , Cohen SE , Reno H , Sun Y , Burroughs M , Sheth M , Chi KH , Danavall D , Philip SS , Cao W , Kersh EN , Pillay A . mSphere 2022 7 (3) e0000922
Sentinel Surveillance Reveals Emerging Daptomycin-Resistant ST736 Enterococcus faecium and Multiple Mechanisms of Linezolid Resistance in Enterococci in the United States. Gargis AS , Spicer LM , Kent AG , Zhu W , Campbell D , McAllister G , Ewing TO , Albrecht V , Stevens VA , Sheth M , Padilla J , Batra D , Johnson JK , Halpin AL , Rasheed JK , Elkins CA , Karlsson M , Lutgring JD . Front Microbiol 2021 12 807398
Analysis of the initial lot of the CDC 2019-Novel Coronavirus (2019-nCoV) real-time RT-PCR diagnostic panel. Lee JS , Goldstein JM , Moon JL , Herzegh O , Bagarozzi DAJr , Oberste MS , Hughes H , Bedi K , Gerard D , Cameron B , Benton C , Chida A , Ahmad A , Petway DJJr , Tang X , Sulaiman N , Teklu D , Batra D , Howard D , Sheth M , Kuhnert W , Bialek SR , Hutson CL , Pohl J , Carroll DS . PLoS One 2021 16 (12) e0260487
Comprehensive characterization of internal and cuticle surface microbiota of laboratory-reared F Anopheles albimanus originating from different sites. Dada N , Benedict AC , Lpez F , Lol JC , Sheth M , Dzuris N , Padilla N , Lenhart A . Malar J 2021 20 (1) 414
Complete Genome Sequence of Rhodococcus sp. Strain W8901, a Human Clinical Specimen, Assembled Using MiSeq and MinION Sequence Data. Gulvik CA , Batra D , Howard DT , Sheth M , Humrighouse BW , Lee J , McQuiston JR , Lasker BA . Microbiol Resour Announc 2021 10 (35) e0061321
Chromosome-Level Genome Sequence of Leishmania (Leishmania) tropica Strain CDC216-162, Isolated from an Afghanistan Clinical Case. Unoarumhi Y , Batra D , Sheth M , Narayanan V , Lin W , Zheng Y , Rowe LA , Pohl J , deAlmeida M . Microbiol Resour Announc 2021 10 (20)
Draft Chromosome Sequences of a Clinical Isolate of the Free-Living Ameba Naegleria fowleri. Ali IKM , Kelley A , Joseph SJ , Park S , Roy S , Jackson J , Cope JR , Rowe LA , Burroughs M , Sheth M , Batra D , Loparev V . Microbiol Resour Announc 2021 10 (15)
Complete and Circularized Bacterial Genome Sequence of Gordonia sp. Strain X0973 Gulvik CA , Batra D , Rowe LA , Sheth M , Nobles S , Lee JS , McQuiston JR , Lasker BA . Microbiol Resour Announc 2021 10 (9)
Development of a new barcode-based, multiplex-PCR, next-generation-sequencing assay and data processing and analytical pipeline for multiplicity of infection detection of Plasmodium falciparum. Mitchell RM , Zhou Z , Sheth M , Sergent S , Frace M , Nayak V , Hu B , Gimnig J , TerKuile F , Lindblade K , Slutsker L , Hamel MJ , Desai M , Otieno K , Kariuki S , Vigfusson Y , Shi YP . Malar J 2021 20 (1) 92
Western Kenyan Anopheles gambiae showing intense permethrin resistance harbour distinct microbiota. Omoke D , Kipsum M , Otieno S , Esalimba E , Sheth M , Lenhart A , Njeru EM , Ochomo E , Dada N . Malar J 2021 20 (1) 77
Genomic Diversity of Burkholderia pseudomallei in Ceara, Brazil. Gee JE , Gulvik CA , Castelo-Branco Dscm , Sidrim JJC , Rocha MFG , Cordeiro RA , Brilhante RSN , Bandeira Tjpg , Patrcio I , Alencar LP , daCostaRibeiro AK , Sheth M , Deka MA , Hoffmaster AR , Rolim D . mSphere 2021 6 (1)
Complete and Circularized Genome Assemblies of the Kroppenstedtia eburnea Genus Type Strain and the Kroppenstedtia pulmonis Species Type Strain with MiSeq and MinION Sequence Data. Gulvik CA , Batra D , Rowe LA , Sheth M , Humrighouse BW , Howard DT , Lee J , McQuiston JR , Lasker BA . Microbiol Resour Announc 2020 9 (44)
Division of the genus Chryseobacterium: Observation of discontinuities in amino acid identity values, a possible consequence of major extinction events, guides transfer of nine species to the genus Epilithonimonas , eleven species to the genus Kaistella , and three species to the genus Halpernia gen. nov., with description of Kaistella daneshvariae sp. nov. and Epilithonimonas vandammei sp. nov. derived from clinical specimens. Nicholson AC , Gulvik CA , Whitney AM , Humrighouse BW , Bell ME , Holmes B , Steigerwalt AG , Villarma A , Sheth M , Batra D , Rowe LA , Burroughs M , Pryor JC , Bernardet JF , Hugo C , Kmpfer P , Newman JD , McQuiston JR . Int J Syst Evol Microbiol 2020 70 (8) 4432-4450
Understanding the Emergence of Multidrug-Resistant Candida : Using Whole-Genome Sequencing to Describe the Population Structure of Candida haemulonii Species Complex. Gade L , Munoz JF , Sheth M , Wagner D , Berkow EL , Forsberg K , Jackson BR , Ramos-Castro R , Escandon P , Dolande M , Ben-Ami R , Espinosa-Bode A , Caceres DH , Lockhart SR , Cuomo CA , Litvintseva AP . Front Genet 2020 11 554
Conserved Patterns of Symmetric Inversion in the Genome Evolution of Bordetella Respiratory Pathogens. Weigand MR , Peng Y , Batra D , Burroughs M , Davis JK , Knipe K , Loparev VN , Johnson T , Juieng P , Rowe LA , Sheth M , Tang K , Unoarumhi Y , Williams MM , Tondella ML . mSystems 2019 4 (6)
Pyrethroid exposure alters internal and cuticle surface bacterial communities in Anopheles albimanus. Dada N , Lol JC , Benedict AC , Lopez F , Sheth M , Dzuris N , Padilla N , Lenhart A . Isme j 2019 13 (10) 2447-2464
Draft Genome Sequences of Leishmania ( Leishmania ) amazonensis , Leishmania ( Leishmania ) mexicana , and Leishmania ( Leishmania ) aethiopica , Potential Etiological Agents of Diffuse Cutaneous Leishmaniasis. Batra D , Lin W , Narayanan V , Rowe LA , Sheth M , Zheng Y , Loparev V , deAlmeida M . Microbiol Resour Announc 2019 8 (20)
First Draft Genome Sequence of Leishmania (Viannia) lainsoni Strain 216-34, Isolated from a Peruvian Clinical Case. Lin W , Batra D , Narayanan V , Rowe LA , Sheth M , Zheng Y , Juieng P , Loparev V , deAlmeida M . Microbiol Resour Announc 2019 8 (6)
Draft Genome Sequence of French Guiana Leishmania ( Viannia ) guyanensis Strain 204-365, Assembled Using Long Reads. Batra D , Lin W , Rowe LA , Sheth M , Zheng Y , Loparev V , deAlmeida M . Microbiol Resour Announc 2018 7 (23)
PacBio Genome Sequences of Escherichia coli Serotype O157:H7, Diffusely Adherent E. coli , and Salmonella enterica Strains, All Carrying Plasmids with an mcr-1 Resistance Gene. Lindsey RL , Batra D , Smith P , Patel PN , Tagg KA , Garcia-Toledo L , Loparev VN , Juieng P , Sheth M , Joung YJ , Rowe LA . Microbiol Resour Announc 2018 7 (14)
Restriction enzyme digestion of host DNA enhances universal detection of parasitic pathogens in blood via targeted amplicon deep sequencing. Flaherty BR , Talundzic E , Barratt J , Kines KJ , Olsen C , Lane M , Sheth M , Bradbury RS . Microbiome 2018 6 (1) 164
The draft genomes of Elizabethkingia anophelis of equine origin are genetically similar to three isolates from human clinical specimens. Johnson WL , Ramachandran A , Torres NJ , Nicholson AC , Whitney AM , Bell M , Villarma A , Humrighouse BW , Sheth M , Dowd SE , McQuiston JR , Gustafson JE . PLoS One 2018 13 (7) e0200731
Whole metagenome sequencing reveals links between mosquito microbiota and insecticide resistance in malaria vectors. Dada N , Sheth M , Liebman K , Pinto J , Lenhart A . Sci Rep 2018 8 (1) 2084
Screening and genomic characterization of filamentous hemagglutinin-deficient Bordetella pertussis. Weigand MR , Pawloski LC , Peng Y , Ju H , Burroughs M , Cassiday PK , Davis JK , DuVall M , Johnson T , Juieng P , Knipe K , Loparev VN , Mathis MH , Rowe LA , Sheth M , Williams MM , Tondella ML . Infect Immun 2018 86 (4)
High-Quality Complete and Draft Genome Sequences for Three Escherichia spp. and Three Shigella spp. Generated with Pacific Biosciences and Illumina Sequencing and Optical Mapping. Schroeder MR , Juieng P , Batra D , Knipe K , Rowe LA , Sheth M , Smith P , Garcia-Toledo L , Loparev VN , Lindsey RL . Genome Announc 2018 6 (1)