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CDC-Authored Genomics and Precision Health Publications Database|Home|PHGKB

CDC-Authored Genomics and Precision Health Publications Database


Last data update: Sep 18, 2023. (Total: 4409 publications since 2011)
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Records 1-30 (of 49 Records)
Query Trace: Shaw J[original query]
Rare variants in CAPN2 increase risk for isolated hypoplastic left heart syndrome
Blue EE , White JJ , Dush MK , Gordon WW , Wyatt BH , White P , Marvin CT , Helle E , Ojala T , Priest JR , Jenkins MM , Almli LM , Reefhuis J , Pangilinan F , Brody LC , McBride KL , Garg V , Shaw GM , Romitti PA , Nembhard WN , Browne ML , Werler MM , Kay DM , Mital S , Chong JX , Nascone-Yoder NM , Bamshad MJ .
HGG Adv 2023 4 (4) 100232
Increased vaccine sensitivity of an emerging SARS-CoV-2 variant
Lewnard JA , Hong V , Kim JS , Shaw SF , Lewin B , Takhar H , Lipsitch M , Tartof SY .
Nat Commun 2023 14 (1) 3854
Neighborhood-level socioeconomic position during early pregnancy and risk of gastroschisis
Neo DT , Desrosiers TA , Martin CL , Carmichael SL , Gucsavas-Calikoglu M , Conway KM , Evans SP , Feldkamp ML , Gilboa SM , Insaf TZ , Musfee FI , Shaw GM , Shumate CJ , Werler MM , Olshan AF .
Epidemiology 2023
Exome-wide assessment of isolated biliary atresia: A report from the National Birth Defects Prevention Study using child-parent trios and a case-control design to identify novel rare variants.
Sok P , Sabo A , Almli LM , Jenkins MM , Nembhard WN , Agopian AJ , Bamshad MJ , Blue EE , Brody LC , Brown AL , Browne ML , Canfield MA , Carmichael SL , Chong JX , Dugan-Perez S , Feldkamp ML , Finnell RH , Gibbs RA , Kay DM , Lei Y , Meng Q , Moore CA , Mullikin JC , Muzny D , Olshan AF , Pangilinan F , Reefhuis J , Romitti PA , Schraw JM , Shaw GM , Werler MM , Harpavat S , Lupo PJ .
Am J Med Genet A 2023
Natural Language Processing for Improved Characterization of COVID-19 Symptoms: An Observational Study of 350,000 Patients in a Large Integrated Healthcare System.
Malden DE , Tartof SY , Ackerson BK , Hong V , Skarbinski J , Yau V , Qian L , Fischer H , Shaw S , Caparosa S , Xie F .
JMIR Public Health Surveill 2022 8 (12) e41529 type
Using a Cloud-Based Machine Learning Classification Tree Analysis to Understand the Demographic Characteristics Associated With COVID-19 Booster Vaccination Among Adults in the United States.
Meng L , Fast HE , Saelee R , Zell E , Murthy BP , Murthy NC , Lu PJ , Shaw L , Harris L , Gibbs-Scharf L , Chorba T .
Open Forum Infect Dis 2022 9 (9) ofac446 type
COVID-19 Vaccine Initiation and Dose Completion During the SARS-CoV-2 Delta Variant Surge in the United States, December 2020-October 2021.
Murthy N , Saelee R , PatelMurthy B , Meng L , Shaw L , Gibbs-Scharf L , Harris L , Chorba T , Zell E .
Public Health Rep 2022 138 (1) 333549221123584 type
Carbapenem-Resistant enterobacterales in individuals with and without health care risk factors -Emerging infections program, United States, 2012-2015.
Bulens SN , Reses HE , Ansari UA , Grass JE , Carmon C , Albrecht V , Lawsin A , McAllister G , Daniels J , Lee YK , Yi S , See I , Jacob JT , Bower CW , Wilson L , Vaeth E , Lynfield R , Vagnone PS , Shaw KM , Dumyati G , Tsay R , Phipps EC , Bamberg W , Janelle SJ , Beldavs ZG , Cassidy PM , Kainer M , Muleta D , Mounsey JT , Laufer-Halpin A , Karlsson M , Lutgring JD , Walters MS .
Am J Infect Control 2022 51 (1) 70-77
Use of Large-Scale Genomics to Identify the Role of Animals and Foods as Potential Sources of Extraintestinal Pathogenic Escherichia coli That Cause Human Illness.
Harrison L , Tyson GH , Strain E , Lindsey RL , Strockbine N , Ceric O , Fortenberry GZ , Harris B , Shaw S , Tillman G , Zhao S , Dessai U .
Foods 2022 11 (13)
Exome sequencing identifies genetic variants in anophthalmia and microphthalmia.
Li J , Yang W , Wang YJ , Ma C , Curry CJ , McGoldrick D , Nickerson DA , Chong JX , Blue EE , Mullikin JC , Reefhuis J , Nembhard WN , Romitti PA , Werler MM , Browne ML , Olshan AF , Finnell RH , Feldkamp ML , Pangilinan F , Almli LM , Bamshad MJ , Brody LC , Jenkins MM , Shaw GM .
Am J Med Genet A 2022 188 (8) 2376-2388
A genome-wide association study of obstructive heart defects among participants in the National Birth Defects Prevention Study.
Rashkin SR , Cleves M , Shaw GM , Nembhard WN , Nestoridi E , Jenkins MM , Romitti PA , Lou XY , Browne ML , Mitchell LE , Olshan AF , Lomangino K , Bhattacharyya S , Witte JS , Hobbs CA .
Am J Med Genet A 2022 188 (8) 2303-2314
Exome sequencing identifies variants in infants with sacral agenesis.
Pitsava G , Feldkamp ML , Pankratz N , Lane J , Kay DM , Conway KM , Hobbs C , Shaw GM , Reefhuis J , Jenkins MM , Almli LM , Moore C , Werler M , Browne ML , Cunniff C , Olshan AF , Pangilinan F , Brody LC , Sicko RJ , Finnell RH , Bamshad MJ , McGoldrick D , Nickerson DA , Mullikin JC , Romitti PA , Mills JL .
Birth Defects Res 2022 114 (7) 215-227
Cloud-Based Influenza Surveillance System in Emergency Departments Using Molecular-Based Testing: Advances and Challenges.
Shaw-Saliba K , Hansoti B , Burkom H , Martinez DA , DuVal A , Lee B , Chau P , McBride B , Hsieh YH , Sathananthan V , Persing D , Turnlund M , Shively R , Dugas A , Rothman RE .
West J Emerg Med 2022 23 (2) 115-123
Model-based analysis of tuberculosis genotype clusters in the United States reveals high degree of heterogeneity in transmission, and state-level differences across California, Florida, New York, and Texas.
Shrestha S , Winglee K , Hill A , Shaw T , Smith J , Kammerer JS , Silk BJ , Marks S , Dowdy D .
Clin Infect Dis 2022 75 (8) 1433-1441
Multiplexed CRISPR-based microfluidic platform for clinical testing of respiratory viruses and identification of SARS-CoV-2 variants.
Welch NL , Zhu M , Hua C , Weller J , Mirhashemi ME , Nguyen TG , Mantena S , Bauer MR , Shaw BM , Ackerman CM , Thakku SG , Tse MW , Kehe J , Uwera MM , Eversley JS , Bielwaski DA , McGrath G , Braidt J , Johnson J , Cerrato F , Moreno GK , Krasilnikova LA , Petros BA , Gionet GL , King E , Huard RC , Jalbert SK , Cleary ML , Fitzgerald NA , Gabriel SB , Gallagher GR , Smole SC , Madoff LC , Brown CM , Keller MW , Wilson MM , Kirby MK , Barnes JR , Park DJ , Siddle KJ , Happi CT , Hung DT , Springer M , MacInnis BL , Lemieux JE , Rosenberg E , Branda JA , Blainey PC , Sabeti PC , Myhrvold C .
Nat Med 2022 28 (5) 1083-1094 type
Mutation of Mycobacterium tuberculosis and Implications for Using Whole-Genome Sequencing for Investigating Recent Tuberculosis Transmission.
Nelson KN , Talarico S , Poonja S , McDaniel CJ , Cilnis M , Chang AH , Raz K , Noboa WS , Cowan L , Shaw T , Posey J , Silk BJ .
Front Public Health 2021 9 790544
Multistate outbreak of Salmonella Typhimurium linked to pet hedgehogs, United States, 2018-2019.
Hoff C , Nichols M , Gollarza L , Scheftel J , Adams J , Tagg KA , FrancoisWatkins L , Poissant T , Stapleton GS , Morningstar-Shaw B , Signs K , Bidol S , Donovan D , Basler C .
Zoonoses Public Health 2022 69 (3) 167-174
Outbreak of Multidrug-Resistant Salmonella Heidelberg Infections Linked to Dairy Calf Exposure, United States, 2015-2018.
Nichols M , Gollarza L , Sockett D , Aulik N , Patton E , FrancoisWatkins LK , Gambino-Shirley KJ , Folster JP , Chen JC , Tagg KA , Stapleton GS , Trees E , Ellison Z , Lombard J , Morningstar-Shaw B , Schlater L , Elbadawi L , Klos R .
Foodborne Pathog Dis 2022 19 (3) 199-208
Modeling complex effects of exposure to particulate matter and extreme heat during pregnancy on congenital heart defects: A U.S. population-based case-control study in the National Birth Defects Prevention Study.
Simmons W , Lin S , Luben TJ , Sheridan SC , Langlois PH , Shaw GM , Reefhuis J , Romitti PA , Feldkamp ML , Nembhard WN , Desrosiers TA , Browne ML , Stingone JA .
Sci Total Environ 2021 808 152150
Exome sequencing of child-parent trios with bladder exstrophy: Findings in 26 children.
Pitsava G , Feldkamp ML , Pankratz N , Lane J , Kay DM , Conway KM , Shaw GM , Reefhuis J , Jenkins MM , Almli LM , Olshan AF , Pangilinan F , Brody LC , Sicko RJ , Hobbs CA , Bamshad M , McGoldrick D , Nickerson DA , Finnell RH , Mullikin J , Romitti PA , Mills JL .
Am J Med Genet A 2021 185 (10) 3028-3041
Logically Inferred Tuberculosis Transmission (LITT): A Data Integration Algorithm to Rank Potential Source Cases.
Winglee K , McDaniel CJ , Linde L , Kammerer S , Cilnis M , Raz KM , Noboa W , Knorr J , Cowan L , Reynolds S , Posey J , SullivanMeissner J , Poonja S , Shaw T , Talarico S , Silk BJ .
Front Public Health 2021 9 667337
Use of Real-Time PCR for Chlamydia psittaci Detection in Human Specimens During an Outbreak of Psittacosis - Georgia and Virginia, 2018.
McGovern OL , Kobayashi M , Shaw KA , Szablewski C , Gabel J , Holsinger C , Drenzek C , Brennan S , Milucky J , Farrar JL , Wolff BJ , Benitez AJ , Thurman KA , Diaz MH , Winchell JM , Schrag S .
MMWR Morb Mortal Wkly Rep 2021 70 (14) 505-509
CD4 receptor diversity represents an ancient protection mechanism against primate lentiviruses.
Russell RM , Bibollet-Ruche F , Liu W , Sherrill-Mix S , Li Y , Connell J , Loy DE , Trimboli S , Smith AG , Avitto AN , Gondim MVP , Plenderleith LJ , Wetzel KS , Collman RG , Ayouba A , Esteban A , Peeters M , Kohler WJ , Miller RA , Franois-Souquiere S , Switzer WM , Hirsch VM , Marx PA , Piel AK , Stewart FA , Georgiev AV , Sommer V , Bertolani P , Hart JA , Hart TB , Shaw GM , Sharp PM , Hahn BH .
Proc Natl Acad Sci U S A 2021 118 (13)
Paternal genetic variants and risk of obstructive heart defects: A parent-of-origin approach.
Patel J , Bircan E , Tang X , Orloff M , Hobbs CA , Browne ML , Botto LD , Finnell RH , Jenkins MM , Olshan A , Romitti PA , Shaw GM , Werler MM , Li J , Nembhard WN .
PLoS Genet 2021 17 (3) e1009413
Development of a new oral poliovirus vaccine for the eradication end game using codon deoptimization.
Konopka-Anstadt Jennifer L, Campagnoli Ray, Vincent Annelet, Shaw Jing, Wei Ling, Wynn Nhien T, Smithee Shane E, Bujaki Erika, Te Yeh Ming, Laassri Majid, Zagorodnyaya Tatiana, Weiner Amy J, Chumakov Konstantin, Andino Raul, Macadam Andrew, Kew Olen, Burns Cara C. NPJ vaccines 2020 Mar 5(1) 26 .
NPJ vaccines 2020 Mar 5(1) 26
STROBE-metagenomics: a STROBE extension statement to guide the reporting of metagenomics studies.
Bharucha T , Oeser C , Balloux F , Brown JR , Carbo EC , Charlett A , Chiu CY , Claas ECJ , deGoffau MC , deVries JJC , Eloit M , Hopkins S , Huggett JF , MacCannell D , Morfopoulou S , Nath A , O'Sullivan DM , Reoma LB , Shaw LP , Sidorov I , Simner PJ , VanTan L , Thomson EC , vanDorp L , Wilson MR , Breuer J , Field N .
Lancet Infect Dis 2020 20 (10) e251-e260
Development of a new oral poliovirus vaccine for the eradication end game using codon deoptimization.
Konopka-Anstadt JL , Campagnoli R , Vincent A , Shaw J , Wei L , Wynn NT , Smithee SE , Bujaki E , TeYeh M , Laassri M , Zagorodnyaya T , Weiner AJ , Chumakov K , Andino R , Macadam A , Kew O , Burns CC .
NPJ Vaccines 2020 5 (1) 26
Adapterama II: universal amplicon sequencing on Illumina platforms (TaggiMatrix).
Glenn Travis C, Pierson Todd W, Bayona-Vásquez Natalia J, Kieran Troy J, Hoffberg Sandra L, Thomas Iv Jesse C, Lefever Daniel E, Finger John W, Gao Bei, Bian Xiaoming, Louha Swarnali, Kolli Ramya T, Bentley Kerin E, Rushmore Julie, Wong Kelvin, Shaw Timothy I, Rothrock Michael J, McKee Anna M, Guo Tai L, Mauricio Rodney, Molina Marirosa, Cummings Brian S, Lash Lawrence H, Lu Kun, Gilbert Gregory S, Hubbell Stephen P, Faircloth Brant C.PeerJ 2019 e7786 .
PeerJ 2019 e7786
Bloodmeal, Host Selection, and Genetic Admixture Analyses of Culex pipiens Complex (Diptera: Culicidae) Mosquitoes in Chicago, IL.
Kothera L , Mutebi JP , Kenney JL , Saxton-Shaw K , Ward MP , Savage HM .
J Med Entomol 2019 57 (1) 78-87
An investigation of Salmonella Fluntern illnesses linked to leopard geckos-United States, 2018.
Koski L , DeBess E , Rosen HE , Reporter R , Waltz T , Leeper M , ConcepcionAcevedo J , Karpiskova R , McCormick J , Gelbicova T , Morningstar-Shaw B , Nichols M , Leman RF .
Zoonoses Public Health 2019 66 (8) 974-977
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