CDC-Authored Genomics and Precision Health Publications Database
Last data update: Dec 05, 2023. (Total: 4799 publications since 2011)
| Query Trace: Saha S[original query] |
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| Global diversity and antimicrobial resistance of typhoid fever pathogens: Insights from a meta-analysis of 13,000 Salmonella Typhi genomes
Carey ME , Dyson ZA , Ingle DJ , Amir A , Aworh MK , Chattaway MA , Chew KL , Crump JA , Feasey NA , Howden BP , Keddy KH , Maes M , Parry CM , Van Puyvelde S , Webb HE , Afolayan AO , Alexander AP , Anandan S , Andrews JR , Ashton PM , Basnyat B , Bavdekar A , Bogoch II , Clemens JD , da Silva KE , De A , de Ligt J , Diaz Guevara PL , Dolecek C , Dutta S , Ehlers MM , Francois Watkins L , Garrett DO , Godbole G , Gordon MA , Greenhill AR , Griffin C , Gupta M , Hendriksen RS , Heyderman RS , Hooda Y , Hormazabal JC , Ikhimiukor OO , Iqbal J , Jacob JJ , Jenkins C , Jinka DR , John J , Kang G , Kanteh A , Kapil A , Karkey A , Kariuki S , Kingsley RA , Koshy RM , Lauer AC , Levine MM , Lingegowda RK , Luby SP , Mackenzie GA , Mashe T , Msefula C , Mutreja A , Nagaraj G , Nagaraj S , Nair S , Naseri TK , Nimarota-Brown S , Njamkepo E , Okeke IN , Perumal SPB , Pollard AJ , Pragasam AK , Qadri F , Qamar FN , Rahman SIA , Rambocus SD , Rasko DA , Ray P , Robins-Browne R , Rongsen-Chandola T , Rutanga JP , Saha SK , Saha S , Saigal K , Sajib MSI , Seidman JC , Shakya J , Shamanna V , Shastri J , Shrestha R , Sia S , Sikorski MJ , Singh A , Smith AM , Tagg KA , Tamrakar D , Tanmoy AM , Thomas M , Thomas MS , Thomsen R , Thomson NR , Tupua S , Vaidya K , Valcanis M , Veeraraghavan B , Weill FX , Wright J , Dougan G , Argimn S , Keane JA , Aanensen DM , Baker S , Holt KE . Elife 2023 12 |
| Pollen and asthma morbidity in Atlanta: A 26-year time-series study
Lappe BL , Ebelt S , D'Souza RR , Manangan A , Brown C , Saha S , Harris D , Chang HH , Sole A , Scovronick N . Environ Int 2023 177 107998 |
| Emergence of a multidrug-resistant and virulent Streptococcus pneumoniae lineage mediates serotype replacement after PCV13: an international whole-genome sequencing study.
Lo SW , Mellor K , Cohen R , Alonso AR , Belman S , Kumar N , Hawkins PA , Gladstone RA , vonGottberg A , Veeraraghavan B , Ravikumar KL , Kandasamy R , Pollard SAJ , Saha SK , Bigogo G , Antonio M , Kwambana-Adams B , Mirza S , Shakoor S , Nisar I , Cornick JE , Lehmann D , Ford RL , Sigauque B , Turner P , Mosi J , Obaro SK , Dagan R , Diawara I , Skoczyska A , Wang H , Carter PE , Klugman KP , Rodgers G , Breiman RF , McGee L , Bentley SD , Almagro CM , Varon E . Lancet Microbe 2022 3 (10) e735-e743 |
| Respiratory syncytial virus among children hospitalized with severe acute respiratory infection in Kashmir, a temperate region in northern India.
Koul PA , Saha S , Kaul KA , Mir H , Potdar V , Chadha M , Iuliano D , Lafond KE , Lal RB , Krishnan A . J Glob Health 2022 12 04050 |
| A Streptococcus pneumoniae lineage usually associated with pneumococcal conjugate vaccine (PCV) serotypes is the most common cause of serotype 35B invasive disease in South Africa, following routine use of PCV.
Ndlangisa KM , duPlessis M , Lo S , deGouveia L , Chaguza C , Antonio M , Kwambana-Adams B , Cornick J , Everett DB , Dagan R , Hawkins PA , Beall B , Corso A , GrassiAlmeida SC , Ochoa TJ , Obaro S , Shakoor S , Donkor ES , Gladstone RA , Ho PL , Paragi M , Doiphode S , Srifuengfung S , Ford R , Mosi J , Saha SK , Bigogo G , Sigauque B , Eser K , Elmdaghri N , Titov L , Turner P , Kumar KLR , Kandasamy R , Egorova E , Ip M , Breiman RF , Klugman KP , McGee L , Bentley SD , vonGottberg A , TheGlobalPneumococcalSequencing Consortium . Microb Genom 2022 8 (4) |
| Associations Between Eight Earth Observation-Derived Climate Variables and Enteropathogen Infection: An Independent Participant Data Meta-Analysis of Surveillance Studies With Broad Spectrum Nucleic Acid Diagnostics.
Colston JM , Zaitchik BF , Badr HS , Burnett E , Ali SA , Rayamajhi A , Satter SM , Eibach D , Krumkamp R , May J , Chilengi R , Howard LM , Sow SO , JahangirHossain M , Saha D , ImranNisar M , Zaidi AKM , Kanungo S , Mandomando I , Faruque ASG , Kotloff KL , Levine MM , Breiman RF , Omore R , Page N , Platts-Mills JA , Ashorn U , Fan YM , Shrestha PS , Ahmed T , Mduma E , Yori PP , Bhutta Z , Bessong P , Olortegui MP , Lima AAM , Kang G , Humphrey J , Prendergast AJ , Ntozini R , Okada K , Wongboot W , Gaensbauer J , Melgar MT , Pelkonen T , Freitas CM , Kosek MN . Geohealth 2022 6 (1) e2021GH000452 |
| Characteristics of Salmonella recovered from stools of children enrolled in the Global Enteric Multicenter Study.
Kasumba IN , Pulford CV , Perez-Sepulveda BM , Sen S , Sayed N , Permala-Booth J , Livio S , Heavens D , Low R , Hall N , Roose A , Powell H , Farag T , Panchalingham S , Berkeley L , Nasrin D , Blackwelder WC , Wu Y , Tamboura B , Sanogo D , Onwuchekwa U , Sow SO , Ochieng JB , Omore R , Oundo JO , Breiman RF , Mintz ED , O'Reilly CE , Antonio M , Saha D , Hossain MJ , Mandomando I , Bassat Q , Alonso PL , Ramamurthy T , Sur D , Qureshi S , Zaidi AKM , Hossain A , Faruque ASG , Nataro JP , Kotloff KL , Levine MM , Hinton JCD , Tennant SM . Clin Infect Dis 2021 73 (4) 631-641 |
| The Clinical Presentation of Culture-positive and Culture-negative, Quantitative Polymerase Chain Reaction (qPCR)-Attributable Shigellosis in the Global Enteric Multicenter Study and Derivation of a Shigella Severity Score: Implications for Pediatric Shigella Vaccine Trials.
Pavlinac PB , Platts-Mills JA , Tickell KD , Liu J , Juma J , Kabir F , Nkeze J , Okoi C , Operario DJ , Uddin MJ , Ahmed S , Alonso PL , Antonio M , Becker SM , Breiman RF , Faruque ASG , Fields B , Gratz J , Haque R , Hossain A , Hossain MJ , Jarju S , Qamar F , Iqbal NT , Kwambana B , Mandomando I , McMurry TL , Ochieng C , Ochieng JB , Ochieng M , Onyango C , Panchalingam S , Kalam A , Aziz F , Qureshi S , Ramamurthy T , Roberts JH , Saha D , Sow SO , Stroup SE , Sur D , Tamboura B , Taniuchi M , Tennant SM , Roose A , Toema D , Wu Y , Zaidi A , Nataro JP , Levine MM , Houpt ER , Kotloff KL . Clin Infect Dis 2020 73 (3) e569-e579 |
| A mosaic tetracycline resistance gene tet(S/M) detected in an MDR pneumococcal CC230 lineage that underwent capsular switching in South Africa.
Lo SW , Gladstone RA , vanTonder AJ , DuPlessis M , Cornick JE , Hawkins PA , Madhi SA , Nzenze SA , Kandasamy R , Ravikumar KL , Elmdaghri N , Kwambana-Adams B , Almeida SCG , Skoczynska A , Egorova E , Titov L , Saha SK , Paragi M , Everett DB , Antonio M , Klugman KP , Li Y , Metcalf BJ , Beall B , McGee L , Breiman RF , Bentley SD , vonGottberg A . J Antimicrob Chemother 2019 75 (3) 512-520 |
| Use of TaqMan Array card for the detection of respiratory viral pathogens in children under 5 years old hospitalised with acute medical illness in Ballabgarh, Haryana, India.
Gaur B , Saha S , Iuliano AD , Rai SK , Krishnan A , Jain S , Whitaker B , Winchell J , Lal RB , Broor S . Indian J Med Microbiol 2019 37 (1) 105-108 |
| Colonization factors among enterotoxigenic Escherichia coli isolates from children with moderate-to-severe diarrhea and from matched controls in the Global Enteric Multicenter Study (GEMS).
Vidal RM , Muhsen K , Tennant SM , Svennerholm AM , Sow SO , Sur D , Zaidi AKM , Faruque ASG , Saha D , Adegbola R , Hossain MJ , Alonso PL , Breiman RF , Bassat Q , Tamboura B , Sanogo D , Onwuchekwa U , Manna B , Ramamurthy T , Kanungo S , Ahmed S , Qureshi S , Quadri F , Hossain A , Das SK , Antonio M , Mandomando I , Nhampossa T , Acacio S , Omore R , Ochieng JB , Oundo JO , Mintz ED , O'Reilly CE , Berkeley LY , Livio S , Panchalingam S , Nasrin D , Farag TH , Wu Y , Sommerfelt H , Robins-Browne RM , DelCanto F , Hazen TH , Rasko DA , Kotloff KL , Nataro JP , Levine MM . PLoS Negl Trop Dis 2019 13 (1) e0007037 |
| Detection of macrolide resistance genes in culture-negative specimens from Bangladeshi children with invasive pneumococcal diseases.
Hasanuzzaman Md, Malaker Roly, Islam Maksuda, Baqui Abdullah H, Darmstadt Gary L, Whitney Cynthia G, Saha Samir K. Journal of global antimicrobial resistance 2017 Jan 8131-134 . Journal of global antimicrobial resistance 2017 Jan 8131-134 |
| Use of quantitative molecular diagnostic methods to identify causes of diarrhoea in children: a reanalysis of the GEMS case-control study.
Liu Jie, Platts-Mills James A, Juma Jane, Kabir Furqan, Nkeze Joseph, Okoi Catherine, Operario Darwin J, Uddin Jashim, Ahmed Shahnawaz, Alonso Pedro L, Antonio Martin, Becker Stephen M, Blackwelder William C, Breiman Robert F, Faruque Abu S G, Fields Barry, Gratz Jean, Haque Rashidul, Hossain Anowar, Hossain M Jahangir, Jarju Sheikh, Qamar Farah, Iqbal Najeeha Talat, Kwambana Brenda, Mandomando Inacio, McMurry Timothy L, Ochieng Caroline, Ochieng John B, Ochieng Melvin, Onyango Clayton, Panchalingam Sandra, Kalam Adil, Aziz Fatima, Qureshi Shahida, Ramamurthy Thandavarayan, Roberts James H, Saha Debasish, Sow Samba O, Stroup Suzanne E, Sur Dipika, Tamboura Boubou, Taniuchi Mami, Tennant Sharon M, Toema Deanna, Wu Yukun, Zaidi Anita, Nataro James P, Kotloff Karen L, Levine Myron M, Houpt Eric R. Lancet (London, England) 2016 Sep 388(10051) 1291-301 . Lancet (London, England) 2016 Sep 388(10051) 1291-301 |
| PCR-Based Serotyping of Streptococcus pneumoniae from Culture-Negative Specimens: Novel Primers for Detection of Serotypes within Serogroup 18.
Tanmoy Arif M, Saha Senjuti, Darmstadt Gary L, Whitney Cynthia G, Saha Samir K. Journal of clinical microbiology 2016 54(8) 2178-81 . Journal of clinical microbiology 2016 54(8) 2178-81 |
| Microbiota that affect risk for shigellosis in children in low-income countries.
Lindsay Brianna, Oundo Joe, Hossain M Anowar, Antonio Martin, Tamboura Boubou, Walker Alan W, Paulson Joseph N, Parkhill Julian, Omore Richard, Faruque Abu S G, Das Suman Kumar, Ikumapayi Usman N, Adeyemi Mitchell, Sanogo Doh, Saha Debasish, Sow Samba, Farag Tamer H, Nasrin Dilruba, Li Shan, Panchalingam Sandra, Levine Myron M, Kotloff Karen, Magder Laurence S, Hungerford Laura, Sommerfelt Halvor, Pop Mihai, Nataro James P, Stine O Colin. Emerging infectious diseases 2015 Feb 21(2) 242-50 . Emerging infectious diseases 2015 Feb 21(2) 242-50 |
| Detection of co-colonization with Streptococcus pneumoniae by algorithmic use of conventional and molecular methods.
Saha Sudipta, Modak Joyanta K, Naziat Hakka, Al-Emran Hassan M, Chowdury Mrittika, Islam Maksuda, Hossain Belal, Darmstadt Gary L, Whitney Cynthia G, Saha Samir K. Vaccine 2015 Jan 29. 33(5) 713-8 . Vaccine 2015 Jan 29. 33(5) 713-8 |
| Diarrhea in young children from low-income countries leads to large-scale alterations in intestinal microbiota composition.
Pop Mihai, Walker Alan W, Paulson Joseph, Lindsay Brianna, Antonio Martin, Hossain M Anowar, Oundo Joseph, Tamboura Boubou, Mai Volker, Astrovskaya Irina, Corrada Bravo Hector, Rance Richard, Stares Mark, Levine Myron M, Panchalingam Sandra, Kotloff Karen, Ikumapayi Usman N, Ebruke Chinelo, Adeyemi Mitchell, Ahmed Dilruba, Ahmed Firoz, Alam Meer Taifur, Amin Ruhul, Siddiqui Sabbir, Ochieng John B, Ouma Emmanuel, Juma Jane, Mailu Euince, Omore Richard, Morris J Glenn, Breiman Robert F, Saha Debasish, Parkhill Julian, Nataro James P, Stine O Colin.Genome biology 2014 (6) R76 . Genome biology 2014 (6) R76 |
| Optimization of Multiple Pathogen Detection Using the TaqMan Array Card: Application for a Population-Based Study of Neonatal Infection.
Diaz Maureen H, Waller Jessica L, Napoliello Rebecca A, Islam Md Shahidul, Wolff Bernard J, Burken Daniel J, Holden Rhiannon L, Srinivasan Velusamy, Arvay Melissa, McGee Lesley, Oberste M Steven, Whitney Cynthia G, Schrag Stephanie J, Winchell Jonas M, Saha Samir K. PloS one 2013 8(6) e66183 . PloS one 2013 8(6) e66183 |
- Page last reviewed:Oct 1, 2023
- Page last updated:Dec 05, 2023
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