CDC-Authored Genomics and Precision Health Publications Database
Last data update: Aug 26, 2024. (Total: 6271 publications)
Query Trace: Sabin S[original query] |
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Molecular epidemiology of enteroviruses from Guatemalan wastewater isolated from human lung fibroblasts
Sayyad L , Harrington C , Castro CJ , Belgasmi-Allen H , Jeffries Miles S , Hill J , Mendoza Prillwitz ML , Gobern L , Gaitán E , Delgado AP , Castillo Signor L , Rondy M , Rey-Benito G , Gerloff N . PLoS One 2024 19 (7) e0305108 ![]() |
Complete genome sequences of six S19 poliovirus reference strains
Castro CJ , Wiese N , Bullows JE , Poston KD , Meade C , Jorba J , Mainou BA . Microbiol Resour Announc 2024 e0008024 ![]() |
Implementing a robust adverse event of special interest surveillance for novel oral polio vaccine type 2 rollout, Nigeria, March-July 2021
Abbott SL , Etapelong SG , Gidado S , Mawashi KY , Edukugho AA , Hamisu AW , Shehu A , Adedire E , Hassan IA , Waziri NE , Bolu O , Adamu US . Pan Afr Med J 2023 45 6 |
Molecular and Phenotypic Characterization of a Highly Evolved Type 2 Vaccine-Derived Poliovirus Isolated from Seawater in Brazil, 2014.
Cassemiro KM , Burlandy FM , Barbosa MR , Chen Q , Jorba J , Hachich EM , Sato MI , Burns CC , da Silva EE . PLoS One 2016 11 (3) e0152251 |
Prevalence of transmitted HIV-1 drug resistance among young adults attending HIV counselling and testing clinics in Kigali, Rwanda.
Mutagoma M , Ndahimana Jd , Kayirangwa E , Dahourou AG , Balisanga H , DeVos JR , McAlister D , Yang C , Bertagnolio S , Riedel DJ , Nsanzimana S . Antivir Ther 2016 21 (3) 247-51 |
Coordinated global cessation of oral poliovirus vaccine use: Options and potential consequences
Kalkowska DA , Wassilak SGF , Wiesen E , Burns CC , Pallansch MA , Badizadegan K , Thompson KM . Risk Anal 2023 |
Genetic stabilization of attenuated oral vaccines against poliovirus types 1 and 3
Yeh MT , Smith M , Carlyle S , Konopka-Anstadt JL , Burns CC , Konz J , Andino R , Macadam A . Nature 2023 619 (7968) 135-142 ![]() |
Immunogenicity of novel oral poliovirus vaccine type 2 administered concomitantly with bivalent oral poliovirus vaccine: an open-label, non-inferiority, randomised, controlled trial
Wilkinson AL , Zaman K , Hoque M , Estivariz CF , Burns CC , Konopka-Anstadt JL , Mainou BA , Kovacs SD , An Q , Lickness JS , Yunus M , Snider CJ , Zhang Y , Coffee E , Abid T , Wassilak SGF , Pallansch MA , Oberste MS , Vertefeuille JF , Anand A . Lancet Infect Dis 2023 23 (9) 1062-1071 |
Update on Vaccine-Derived Poliovirus Outbreaks - Worldwide, January 2021-December 2022.
Bigouette JP , Henderson E , Traoré MA , Wassilak SGF , Jorba J , Mahoney F , Bolu O , Diop OM , Burns CC . MMWR Morb Mortal Wkly Rep 2023 72 (14) 366-371 ![]() |
Vaccine-derived poliovirus serotype 2 outbreaks and response in the Democratic Republic of the Congo, 2017-2021.
Alleman MM , Jorba J , Riziki Y , Henderson E , Mwehu A , Seakamela L , Howard W , Kadiobo Mbule A , Nsamba RN , Djawe K , Yapi MD , Mengouo MN , Gumede N , Ndoutabe M , Kfutwah AKW , Senouci K , Burns CC . Vaccine 2023 41 Suppl 1 A35-A47 ![]() |
Genetic and epidemiological description of an outbreak of circulating vaccine-derived polio-virus type 2 (cVDPV2) in Angola, 2019-2020.
Morais A , Morais J , Felix M , Neto Z , Madaleno V , Umar AS , Panda N , Lemma F , Chivale JAL , Cavalcante DG , Davlantes E , Ghiselli M , Espinosa C , Whiteman A , Iber J , Henderson E , Bullard K , Jorba J , Burns CC , Diop O , Gumede N , Seakamela L , Howard W , Frawley A . Vaccine 2023 41 Suppl 1 A48-A57 ![]() |
Portable and cost-effective genetic detection and characterization of Plasmodium falciparum hrp2 using the MinION sequencer.
Sabin S , Jones S , Patel D , Subramaniam G , Kelley J , Aidoo M , Talundzic E . Sci Rep 2023 13 (1) 2893 ![]() |
Molecular evolution and antigenic drift of type 3 iVDPVs excreted from a patient with immunodeficiency in Ningxia, China.
Fan Q , Ma J , Li X , Jorba J , Yuan F , Zhu H , Hu L , Song Y , Wang D , Zhu S , Yan D , Chen H , Xu W , Zhang Y . J Med Virol 2023 95 (1) e28215 |
Nearly Complete Genome Sequences of Type 2 Sabin-Like Polioviruses from Northern Nigerian Poliovirus Surveillance, 2016 to 2018.
Zhao K , Schmidt A , Tang K , Castro CJ , Liu H , Pang H , Chen Q , Baba M , Soji OB , Bukbuk D , Akinola M , Adeniji JA , Marine RL , Ng TFF , Jorba J , Burns CC . Microbiol Resour Announc 2022 12 (1) e0073522 ![]() |
Evaluation of the safety, immunogenicity, and faecal shedding of novel oral polio vaccine type 2 in healthy newborn infants in Bangladesh: a randomised, controlled, phase 2 clinical trial.
Zaman K , Bandyopadhyay AS , Hoque M , Gast C , Yunus M , Jamil KM , Mainou BA , Konopka-Anstadt JL , Hendley WS , Vincent A , Clemens R , Clemens SAC , Ross AG , Clemens JD , Tritama E . Lancet 2022 401 (10371) 131-139 |
Genetic and phenotypic stability of poliovirus shed from infants who received novel type 2 or Sabin type 2 oral poliovirus vaccines in Panama: an analysis of two clinical trials.
Wahid R , Mercer LD , De Leon T , DeAntonio R , Sáez-Llorens X , Macadam A , Chumakov K , Strating J , Koel B , Konopka-Anstadt JL , Oberste MS , Burns CC , Andino R , Tritama E , Bandyopadhyay AS , Aguirre G , Rüttimann R , Gast C , Konz JO . Lancet Microbe 2022 3 (12) e912-e921 ![]() |
Deep sequencing of HIV-1 reveals extensive subtype variation and drug resistance after failure of first-line antiretroviral regimens in Nigeria.
ElBouzidi K , Datir RP , Kwaghe V , Roy S , Frampton D , Breuer J , Ogbanufe O , Murtala-Ibrahim F , Charurat M , Dakum P , Sabin CA , Ndembi N , Gupta RK . J Antimicrob Chemother 2022 77 (2) 474-482 |
Novel Network Method Major Minor Variation Clustering Enables Identification of Poliovirus Clusters with High-Resolution Linkages.
Tan J , Zhao Y , Burns CC , Tian D , Zhao K . J Comput Biol 2022 30 (4) 409-419 ![]() |
Fecal shedding of two novel live attenuated oral poliovirus type 2 vaccines candidates by healthy bOPV/IPV-vaccinated infants: two randomized clinical trials.
Gast C , Bandyopadhyay AS , Sáez-Llorens X , De Leon T , DeAntonio R , Jimeno J , Aguirre G , McDuffie LM , Coffee E , Mathis DL , Oberste MS , Weldon WC , Konopka-Anstadt JL , Modlin J , Bachtiar NS , Fix A , Konz J , Clemens R , Costa Clemens SA , Rüttimann R . J Infect Dis 2022 226 (5) 852-861 ![]() |
Concurrent outbreaks of circulating vaccine-derived poliovirus types 1 and 2 affecting the Republic of the Philippines and Malaysia, 2019-2021.
Snider CJ , Boualam L , Tallis G , Takashima Y , Abeyasinghe R , Lo YR , Grabovac V , Avagyan T , Aslam SK , Eltayeb AO , Aung KD , Wang X , Shrestha A , Ante-Orozco C , Silva MWT , Lapastora-Sucaldito N , Apostol LNG , Jikal MBH , Miraj W , Lodhi F , Kim HJ , Rusli N , Thorley BR , Kaye MB , Nishimura Y , Arita M , Sani JAM , Rundi C , Feldon K . Vaccine 2022 41 Suppl 1 A58-A69 ![]() |
Evaluating stability of attenuated Sabin and two novel type 2 oral poliovirus vaccines in children.
Wahid R , Mercer L , Gast C , De Leon T , Sáez-Llorens X , Fix A , Macadam A , Stephens L , Chumakov K , Smits SL , Murreddu M , Konopka-Anstadt JL , Steven Oberste M , Burns CC , Andino R , Bachtiar NS , Tritama E , Bandyopadhyay AS , Aguirre G , Rüttimann R , Konz JO . NPJ Vaccines 2022 7 (1) 19 ![]() |
Deep sequencing of HIV-1 reveals extensive subtype variation and drug resistance after failure of first-line antiretroviral regimens in Nigeria.
El Bouzidi Kate, Datir Rawlings P, Kwaghe Vivian, Roy Sunando, Frampton Dan, Breuer Judith, Ogbanufe Obinna, Murtala-Ibrahim Fati, Charurat Man, Dakum Patrick, Sabin Caroline A, Ndembi Nicaise, Gupta Ravindra K. The Journal of antimicrobial chemotherapy 2022 77(2) 474-482 . The Journal of antimicrobial chemotherapy 2022 77(2) 474-482 |
Update on Vaccine-Derived Poliovirus Outbreaks - Worldwide, January 2020-June 2021.
Alleman MM , Jorba J , Henderson E , Wiesen E , Wassilak SGF , Burns CC . MMWR Morb Mortal Wkly Rep 2021 70 (49) 1691-1699 |
Direct detection of polioviruses using a recombinant poliovirus receptor.
Gerloff N , Mandelbaum M , Pang H , Collins N , Brown B , Sun H , Harrington C , Hecker J , Agha C , Burns CC , Vega E . PLoS One 2021 16 (11) e0259099 ![]() |
Assessment of genetic changes and neurovirulence of shed Sabin and novel type 2 oral polio vaccine viruses.
Wahid R , Mercer L , Macadam A , Carlyle S , Stephens L , Martin J , Chumakov K , Laassri M , Petrovskaya S , Smits SL , Stittelaar KJ , Gast C , Weldon WC , Konopka-Anstadt JL , Oberste MS , Van Damme P , De Coster I , Rüttimann R , Bandyopadhyay A , Konz J . NPJ Vaccines 2021 6 (1) 94 ![]() |
Environmental Surveillance for Risk Assessment in the Context of a Phase 2 Clinical Trial of Type 2 Novel Oral Polio Vaccine in Panama.
Rojas-Bonilla M , Coulliette-Salmond A , Belgasmi H , Wong K , Sayyad L , Vega E , Grimoldi F , Oberste MS , Ruttimann R . Viruses 2021 13 (7) ![]() |
Safety and immunogenicity of two novel type 2 oral poliovirus vaccine candidates compared with a monovalent type 2 oral poliovirus vaccine in children and infants: two clinical trials.
Sáez-Llorens X , Bandyopadhyay AS , Gast C , Leon T , DeAntonio R , Jimeno J , Caballero MI , Aguirre G , Oberste MS , Weldon WC , Konopka-Anstadt JL , Modlin J , Bachtiar NS , Fix A , Konz J , Clemens R , Costa Clemens SA , Rüttimann R . Lancet 2020 397 (10268) 27-38 ![]() |
Safety and immunogenicity of two novel type 2 oral poliovirus vaccine candidates compared with a monovalent type 2 oral poliovirus vaccine in healthy adults: two clinical trials.
De Coster I , Leroux-Roels I , Bandyopadhyay AS , Gast C , Withanage K , Steenackers K , De Smedt P , Aerssens A , Leroux-Roels G , Oberste MS , Konopka-Anstadt JL , Weldon WC , Fix A , Konz J , Wahid R , Modlin J , Clemens R , Costa Clemens SA , Bachtiar NS , Van Damme P . Lancet 2020 397 (10268) 39-50 ![]() |
Development of a new oral poliovirus vaccine for the eradication end game using codon deoptimization.
Konopka-Anstadt JL , Campagnoli R , Vincent A , Shaw J , Wei L , Wynn NT , Smithee SE , Bujaki E , Te Yeh M , Laassri M , Zagorodnyaya T , Weiner AJ , Chumakov K , Andino R , Macadam A , Kew O , Burns CC . NPJ Vaccines 2020 5 (1) 26 ![]() |
High prevalence of integrase mutation L74I in West African HIV-1 subtypes prior to integrase inhibitor treatment.
El Bouzidi K , Kemp SA , Datir RP , Murtala-Ibrahim F , Aliyu A , Kwaghe V , Frampton D , Roy S , Breuer J , Sabin CA , Ogbanufe O , Charurat ME , Bonsall D , Golubchik T , Fraser C , Dakum P , Ndembi N , Gupta RK . J Antimicrob Chemother 2020 75 (6) 1575-1579 ![]() |
- Page last reviewed:Feb 1, 2024
- Page last updated:Aug 26, 2024
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