CDC-Authored Genomics and Precision Health Publications Database
Last data update: Sep 03, 2024. (Total: 6282 publications)
| Query Trace: Posey J[original query] |
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| Characterizing the etiology of recurrent tuberculosis using whole genome sequencing-Alaska, USA, 2008-2020
Springer YP , Tompkins ML , Newell K , Jones M , Burns S , Chandler B , Cowan LS , Kammerer JS , Posey JE , Raz KM , Rothoff M , Silk BJ , Vergnetti YL , McLaughlin JB , Talarico S . J Infect Dis 2024 
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| Prediction of pyrazinamide resistance in Mycobacterium tuberculosis using structure-based machine-learning approaches
Carter JJ , Walker TM , Walker AS , Whitfield MG , Morlock GP , Lynch CI , Adlard D , Peto TEA , Posey JE , Crook DW , Fowler PW . JAC Antimicrob Resist 2024 6 (2) dlae037
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| A standardised method for interpreting the association between mutations and phenotypic drug resistance in Mycobacterium tuberculosis.
Miotto P , Tessema B , Tagliani E , Chindelevitch L , Starks AM , Emerson C , Hanna D , Kim PS , Liwski R , Zignol M , Gilpin C , Niemann S , Denkinger CM , Fleming J , Warren RM , Crook D , Posey J , Gagneux S , Hoffner S , Rodrigues C , Comas I , Engelthaler DM , Murray M , Alland D , Rigouts L , Lange C , Dheda K , Hasan R , Ranganathan UDK , McNerney R , Ezewudo M , Cirillo DM , Schito M , Köser CU , Rodwell TC . Eur Respir J 2017 50 (6) |
| Prediction of Susceptibility to First-Line Tuberculosis Drugs by DNA Sequencing.
Allix-Béguec C , Arandjelovic I , Bi L , Beckert P , Bonnet M , Bradley P , Cabibbe AM , Cancino-Muñoz I , Caulfield MJ , Chaiprasert A , Cirillo DM , Clifton DA , Comas I , Crook DW , De Filippo MR , de Neeling H , Diel R , Drobniewski FA , Faksri K , Farhat MR , Fleming J , Fowler P , Fowler TA , Gao Q , Gardy J , Gascoyne-Binzi D , Gibertoni-Cruz AL , Gil-Brusola A , Golubchik T , Gonzalo X , Grandjean L , He G , Guthrie JL , Hoosdally S , Hunt M , Iqbal Z , Ismail N , Johnston J , Khanzada FM , Khor CC , Kohl TA , Kong C , Lipworth S , Liu Q , Maphalala G , Martinez E , Mathys V , Merker M , Miotto P , Mistry N , Moore DAJ , Murray M , Niemann S , Omar SV , Ong RT , Peto TEA , Posey JE , Prammananan T , Pym A , Rodrigues C , Rodrigues M , Rodwell T , Rossolini GM , Sánchez Padilla E , Schito M , Shen X , Shendure J , Sintchenko V , Sloutsky A , Smith EG , Snyder M , Soetaert K , Starks AM , Supply P , Suriyapol P , Tahseen S , Tang P , Teo YY , Thuong TNT , Thwaites G , Tortoli E , van Soolingen D , Walker AS , Walker TM , Wilcox M , Wilson DJ , Wyllie D , Yang Y , Zhang H , Zhao Y , Zhu B . N Engl J Med 2018 379 (15) 1403-1415 |
| Molecular surveillance for large outbreaks of tuberculosis in the United States, 2014-2018.
Raz KM , Talarico S , Althomsons SP , Kammerer JS , Cowan LS , Haddad MB , McDaniel CJ , Wortham JM , France AM , Powell KM , Posey JE , Silk BJ . Tuberculosis (Edinb) 2022 136 102232
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| Mutation of Mycobacterium tuberculosis and Implications for Using Whole-Genome Sequencing for Investigating Recent Tuberculosis Transmission.
Nelson KN , Talarico S , Poonja S , McDaniel CJ , Cilnis M , Chang AH , Raz K , Noboa WS , Cowan L , Shaw T , Posey J , Silk BJ . Front Public Health 2021 9 790544
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| Logically Inferred Tuberculosis Transmission (LITT): A Data Integration Algorithm to Rank Potential Source Cases.
Winglee K , McDaniel CJ , Linde L , Kammerer S , Cilnis M , Raz KM , Noboa W , Knorr J , Cowan L , Reynolds S , Posey J , Sullivan Meissner J , Poonja S , Shaw T , Talarico S , Silk BJ . Front Public Health 2021 9 667337
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| Molecular evaluation of fluoroquinolone resistance in serial Mycobacterium tuberculosis isolates from individuals diagnosed with multidrug-resistant tuberculosis.
Willby M , Chopra P , Lemmer D , Klein K , Dalton TL , Engelthaler DM , Cegielski P , Posey JE . Antimicrob Agents Chemother 2020 65 (1)
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| Isoniazid- and Rifampin-Resistance Mutations Associated with Resistance to Second-line Drugs and with Sputum Culture Conversion.
Click ES , Kurbatova E , Alexander H , Dalton TL , Chen MP , Posey JE , Ershova JJ , Cegielski P . J Infect Dis 2020 221 (12) 2072-2082
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| A landscape of genomic alterations at the root of a near-untreatable tuberculosis epidemic.
Klopper M , Heupink TH , Hill-Cawthorne G , Streicher EM , Dippenaar A , de Vos M , Abdallah AM , Limberis J , Merker M , Burns S , Niemann S , Dheda K , Posey J , Pain A , Warren RM . BMC Med 2020 18 (1) 24
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| Pathogen Genomics in Public Health.
Armstrong GL , MacCannell DR , Taylor J , Carleton HA , Neuhaus EB , Bradbury RS , Posey JE , Gwinn M . N Engl J Med 2019 381 (26) 2569-2580 
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| Bedaquiline Microheteroresistance after Cessation of Tuberculosis Treatment.
de Vos M , Ley SD , Wiggins KB , Derendinger B , Dippenaar A , Grobbelaar M , Reuter A , Dolby T , Burns S , Schito M , Engelthaler DM , Metcalfe J , Theron G , van Rie A , Posey J , Warren R , Cox H . N Engl J Med 2019 380 (22) 2178-2180 |
| Integrating standardized whole genome sequence analysis with a global Mycobacterium tuberculosis antibiotic resistance knowledgebase.
Ezewudo M , Borens A , Chiner-Oms A , Miotto P , Chindelevitch L , Starks AM , Hanna D , Liwski R , Zignol M , Gilpin C , Niemann S , Kohl TA , Warren RM , Crook D , Gagneux S , Hoffner S , Rodrigues C , Comas I , Engelthaler DM , Alland D , Rigouts L , Lange C , Dheda K , Hasan R , McNerney R , Cirillo DM , Schito M , Rodwell TC , Posey J . Sci Rep 2018 8 (1) 15382
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| Validation of novel Mycobacterium tuberculosis isoniazid resistance mutations not detectable by common molecular tests.
Kandler JL , Mercante AD , Dalton TL , Ezewudo MN , Cowan LS , Burns SP , Metchock B , Cegielski P , Posey JE . Antimicrob Agents Chemother 2018 62 (10)
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| Statistical Method to Detect Tuberculosis Outbreaks among Endemic Clusters in a Low-Incidence Setting.
Althomsons SP , Hill AN , Harrist AV , France AM , Powell KM , Posey JE , Cowan LS , Navin TR . Emerg Infect Dis 2018 24 (3) 573-575
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| Detection of Apparent Cell-free M. tuberculosis DNA from Plasma.
Click ES , Murithi W , Ouma GS , McCarthy K , Willby M , Musau S , Alexander H , Pevzner E , Posey J , Cain KP . Sci Rep 2018 8 (1) 645
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| Detection of Mycobacterium tuberculosis pncA mutations by the NIPRO Genoscholar(™)·PZA-TB II as compared to conventional sequencing.
Willby MJ , Wijkander M , Havumaki J , Johnson K , Werngren J , Hoffner S , Denkinger CM , Posey JE . Antimicrob Agents Chemother 2017 62 (1)
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| Genetic Determinants of Drug Resistance in Mycobacterium tuberculosis and Their Diagnostic Value.
Farhat MR , Sultana R , Iartchouk O , Bozeman S , Galagan J , Sisk P , Stolte C , Nebenzahl-Guimaraes H , Jacobson K , Sloutsky A , Kaur D , Posey J , Kreiswirth BN , Kurepina N , Rigouts L , Streicher EM , Victor TC , Warren RM , van Soolingen D , Murray M . Am J Respir Crit Care Med 2016 194 (5) 621-30 |
| Rv3351c, a Mycobacterium tuberculosis gene that affects bacterial growth and alveolar epithelial cell viability.
Pavlicek RL , Fine-Coulson K , Gupta T , Quinn FD , Posey JE , Willby M , Castro-Garza J , Karls RK . Can J Microbiol 2015 61 (12) 1-10 |
| Mycobacterium tuberculosis pncA polymorphisms that do not confer pyrazinamide resistance at a breakpoint concentration of 100 µg/ml in MGIT.
Whitfield MG , Warren RM , Streicher EM , Sampson SL , Sirgel FA , van Helden PD , Mercante A , Willby M , Hughes K , Birkness K , Morlock G , van Rie A , Posey JE . J Clin Microbiol 2015 |
| Genomic epidemiology of multidrug-resistant Mycobacterium tuberculosis during transcontinental spread.
Coscolla M , Barry PM , Oeltmann JE , Koshinsky H , Shaw T , Cilnis M , Posey J , Rose J , Weber T , Fofanov VY , Gagneux S , Kato-Maeda M , Metcalfe JZ . J Infect Dis 2015 212 (2) 302-10 |
| Disparities in capreomycin resistance levels associated with the rrs A1401G mutation in clinical isolates of Mycobacterium tuberculosis.
Reeves AZ , Campbell PJ , Willby MJ , Posey JE . Antimicrob Agents Chemother 2014 59 (1) 444-9 |
| Antimycobacterial activity of DNA intercalator inhibitors of Mycobacterium tuberculosis primase DnaG.
Gajadeera C , Willby MJ , Green KD , Shaul P , Fridman M , Garneau-Tsodikova S , Posey JE , Tsodikov OV . J Antibiot (Tokyo) 2014 68 (3) 153-7 |
| Genomic analysis identifies targets of convergent positive selection in drug-resistant Mycobacterium tuberculosis
Farhat MR , Shapiro BJ , Kieser KJ , Sultana R , Jacobson KR , Victor TC , Warren RM , Streicher EM , Calver A , Sloutsky A , Kaur D , Posey JE , Plikaytis B , Oggioni MR , Gardy JL , Johnston JC , Rodrigues M , Tang PK , Kato-Maeda M , Borowsky ML , Muddukrishna B , Kreiswirth BN , Kurepina N , Galagan J , Gagneux S , Birren B , Rubin EJ , Lander ES , Sabeti PC , Murray M . Nat Genet 2013 45 (10) 1183-9 |
| Aminoglycoside cross-resistance in mycobacterium tuberculosis due to mutations in the 5' untranslated region of whiB7
Reeves AZ , Campbell PJ , Sultana R , Malik S , Murray M , Plikaytis BB , Shinnick TM , Posey JE . Antimicrob Agents Chemother 2013 57 (4) 1857-65 |
| Ultralong C100 mycolic acids support the assignment of segniliparus as a new bacterial genus
Hong S , Cheng TY , Layre E , Sweet L , Young DC , Posey JE , Butler WR , Moody DB . PLoS One 2012 7 (6) e39017 |
| New insights into fluoroquinolone resistance in Mycobacterium tuberculosis: functional genetic analysis of gyrA and gyrB mutations.
Malik S , Willby M , Sikes D , Tsodikov OV , Posey JE . PLoS One 2012 7 (6) e39754 |
| Molecular detection of mutations associated with first- and second-line drug resistance compared with conventional drug susceptibility testing of Mycobacterium tuberculosis.
Campbell PJ , Morlock GP , Sikes RD , Dalton TL , Metchock B , Starks AM , Hooks DP , Cowan LS , Plikaytis BB , Posey JE . Antimicrob Agents Chemother 2011 55 (5) 2032-41 |
| Rapid detection of multidrug resistant tuberculosis using real-time PCR and high resolution melt analysis
Ramirez MV , Cowart KC , Campbell PJ , Morlock GP , Sikes D , Winchell JM , Posey JE . J Clin Microbiol 2010 48 (11) 4003-9 |
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