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CDC-Authored Genomics and Precision Health Publications Database|Home|Public Health Genomics and Precision Health Knowledge Base (PHGKB)

CDC-Authored Genomics and Precision Health Publications Database


Last data update: Dec 09, 2024. (Total: 6442 publications)
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Records 1-30 (of 79 Records)
Query Trace: Philip C[original query]
Prediction of Susceptibility to First-Line Tuberculosis Drugs by DNA Sequencing.
Allix-Béguec C , Arandjelovic I , Bi L , Beckert P , Bonnet M , Bradley P , Cabibbe AM , Cancino-Muñoz I , Caulfield MJ , Chaiprasert A , Cirillo DM , Clifton DA , Comas I , Crook DW , De Filippo MR , de Neeling H , Diel R , Drobniewski FA , Faksri K , Farhat MR , Fleming J , Fowler P , Fowler TA , Gao Q , Gardy J , Gascoyne-Binzi D , Gibertoni-Cruz AL , Gil-Brusola A , Golubchik T , Gonzalo X , Grandjean L , He G , Guthrie JL , Hoosdally S , Hunt M , Iqbal Z , Ismail N , Johnston J , Khanzada FM , Khor CC , Kohl TA , Kong C , Lipworth S , Liu Q , Maphalala G , Martinez E , Mathys V , Merker M , Miotto P , Mistry N , Moore DAJ , Murray M , Niemann S , Omar SV , Ong RT , Peto TEA , Posey JE , Prammananan T , Pym A , Rodrigues C , Rodrigues M , Rodwell T , Rossolini GM , Sánchez Padilla E , Schito M , Shen X , Shendure J , Sintchenko V , Sloutsky A , Smith EG , Snyder M , Soetaert K , Starks AM , Supply P , Suriyapol P , Tahseen S , Tang P , Teo YY , Thuong TNT , Thwaites G , Tortoli E , van Soolingen D , Walker AS , Walker TM , Wilcox M , Wilson DJ , Wyllie D , Yang Y , Zhang H , Zhao Y , Zhu B .
N Engl J Med 2018 379 (15) 1403-1415
Cryptic transmission of SARS-CoV-2 in Washington State.
Bedford T , Greninger AL , Roychoudhury P , Starita LM , Famulare M , Huang ML , Nalla A , Pepper G , Reinhardt A , Xie H , Shrestha L , Nguyen TN , Adler A , Brandstetter E , Cho S , Giroux D , Han PD , Fay K , Frazar CD , Ilcisin M , Lacombe K , Lee J , Kiavand A , Richardson M , Sibley TR , Truong M , Wolf CR , Nickerson DA , Rieder MJ , Englund JA , Hadfield J , Hodcroft EB , Huddleston J , Moncla LH , Müller NF , Neher RA , Deng X , Gu W , Federman S , Chiu C , Duchin J , Gautom R , Melly G , Hiatt B , Dykema P , Lindquist S , Queen K , Tao Y , Uehara A , Tong S , MacCannell D , Armstrong GL , Baird GS , Chu HY , Shendure J , Jerome KR .
medRxiv 2020 type
Selective Whole-Genome Amplification as a Tool to Enrich Specimens with Low Treponema pallidum Genomic DNA Copies for Whole-Genome Sequencing.
Thurlow CM , Joseph SJ , Ganova-Raeva L , Katz SS , Pereira L , Chen C , Debra A , Vilfort K , Workowski K , Cohen SE , Reno H , Sun Y , Burroughs M , Sheth M , Chi KH , Danavall D , Philip SS , Cao W , Kersh EN , Pillay A .
mSphere 2022 7 (3) e0000922 type
Contact tracing outcomes among household contacts of fully vaccinated COVID-19 patients - San Francisco, California, January 29-July 2, 2021.
Sachdev DD , Chew Ng R , Sankaran M , Ernst A , Hernandez KT , Servellita V , Sotomayor-Gonzalez A , Stoltey J , Cohen SE , Nguyen TQ , Chiu C , Philip S .
Clin Infect Dis 2021 75 (1) e267-e275 type
The CDC HIV Outbreak Coordination Unit: Developing a Standardized, Collaborative Approach to HIV Outbreak Assessment and Response.
Oster AM , France AM , McClung RP , Buchacz K , Lyss SB , Peters PJ , Weidle PJ , Switzer WM , Phillip SAJr , Brooks JT , Hernandez AL .
Public Health Rep 2021 137 (4) 333549211018678 type
Neurologic Involvement in Children and Adolescents Hospitalized in the United States for COVID-19 or Multisystem Inflammatory Syndrome.
LaRovere KL , Riggs BJ , Poussaint TY , Young CC , Newhams MM , Maamari M , Walker TC , Singh AR , Dapul H , Hobbs CV , McLaughlin GE , Son MBF , Maddux AB , Clouser KN , Rowan CM , McGuire JK , Fitzgerald JC , Gertz SJ , Shein SL , Munoz AC , Thomas NJ , Irby K , Levy ER , Staat MA , Tenforde MW , Feldstein LR , Halasa NB , Giuliano JS Jr , Hall MW , Kong M , Carroll CL , Schuster JE , Doymaz S , Loftis LL , Tarquinio KM , Babbitt CJ , Nofziger RA , Kleinman LC , Keenaghan MA , Cvijanovich NZ , Spinella PC , Hume JR , Wellnitz K , Mack EH , Michelson KN , Flori HR , Patel MM , Randolph AG .
JAMA Neurol 2021 78 (5) 536-547
Reactive astrocyte nomenclature, definitions, and future directions.
Escartin C , Galea E , Lakatos A , O'Callaghan JP , Petzold GC , Serrano-Pozo A , Steinhäuser C , Volterra A , Carmignoto G , Agarwal A , Allen NJ , Araque A , Barbeito L , Barzilai A , Bergles DE , Bonvento G , Butt AM , Chen WT , Cohen-Salmon M , Cunningham C , Deneen B , De Strooper B , Díaz-Castro B , Farina C , Freeman M , Gallo V , Goldman JE , Goldman SA , Götz M , Gutiérrez A , Haydon PG , Heiland DH , Hol EM , Holt MG , Iino M , Kastanenka KV , Kettenmann H , Khakh BS , Koizumi S , Lee CJ , Liddelow SA , MacVicar BA , Magistretti P , Messing A , Mishra A , Molofsky AV , Murai KK , Norris CM , Okada S , Oliet SHR , Oliveira JF , Panatier A , Parpura V , Pekna M , Pekny M , Pellerin L , Perea G , Pérez-Nievas BG , Pfrieger FW , Poskanzer KE , Quintana FJ , Ransohoff RM , Riquelme-Perez M , Robel S , Rose CR , Rothstein JD , Rouach N , Rowitch DH , Semyanov A , Sirko S , Sontheimer H , Swanson RA , Vitorica J , Wanner IB , Wood LB , Wu J , Zheng B , Zimmer ER , Zorec R , Sofroniew MV , Verkhratsky A .
Nat Neurosci 2021 24 (3) 312-325
Hepatitis C virus infection and polysubstance use among young adult people who inject drugs in a rural county of New Mexico.
Wagner K , Zhong Y , Teshale E , White K , Winstanley EL , Hettema J , Thornton K , Bisztray B , Fiuty P , Page K .
Drug Alcohol Depend 2021 220 108527
Timely Intervention and Control of a Novel Coronavirus (COVID-19) Outbreak at a Large Skilled Nursing Facility - San Francisco, California, 2020.
Karmarkar E , Blanco I , Amornkul P , DuBois A , Deng X , Moonan PK , Rubenstein BL , Miller DA , Kennedy I , Yu J , Dauterman J , Ongpin M , Hathaway W , Hoo L , Trammell S , Ememu E , Yu G , Khwaja Z , Lu W , Talai N , Jain S , Louie J , Philip S , Federman S , Masinde G , Wadford DA , Bobba N , Stoltey J , Smith A , Epson E , Chiu C , Bennett A , Vasquez AM , Williams T .
Infect Control Hosp Epidemiol 2020 42 (10) 1-20 type
Identifying septic pollution exposure routes during a waterborne norovirus outbreak - A new application for human-associated microbial source tracking qPCR.
Mattioli MC , Benedict KM , Murphy J , Kahler A , Kline KE , Longenberger A , Mitchell PK , Watkins S , Berger P , Shanks OC , Barrett CE , Barclay L , Hall AJ , Hill V , Weltman A .
J Microbiol Methods 2020 180 106091 type
Risk Assessment and Management of COVID-19 Among Travelers Arriving at Designated U.S. Airports, January 17-September 13, 2020.
Dollard P , Griffin I , Berro A , Cohen NJ , Singler K , Haber Y , de la Motte Hurst C , Stolp A , Atti S , Hausman L , Shockey CE , Roohi S , Brown CM , Rotz LD , Cetron MS , Alvarado-Ramy F .
MMWR Morb Mortal Wkly Rep 2020 69 (45) 1681-1685
Africa Centres for Disease Control and Prevention Is Closing Gaps in Disease Detection.
Varma J , Maeda J , Magafu Mgmd , Onyebujoh PC .
Health Secur 2020 18 (6) 483-488 type
Association Between Social Vulnerability and a County's Risk for Becoming a COVID-19 Hotspot - United States, June 1-July 25, 2020.
Dasgupta S , Bowen VB , Leidner A , Fletcher K , Musial T , Rose C , Cha A , Kang G , Dirlikov E , Pevzner E , Rose D , Ritchey MD , Villanueva J , Philip C , Liburd L , Oster AM .
MMWR Morb Mortal Wkly Rep 2020 69 (42) 1535-1541
Cryptic transmission of SARS-CoV-2 in Washington state.
Bedford T , Greninger AL , Roychoudhury P , Starita LM , Famulare M , Huang ML , Nalla A , Pepper G , Reinhardt A , Xie H , Shrestha L , Nguyen TN , Adler A , Brandstetter E , Cho S , Giroux D , Han PD , Fay K , Frazar CD , Ilcisin M , Lacombe K , Lee J , Kiavand A , Richardson M , Sibley TR , Truong M , Wolf CR , Nickerson DA , Rieder MJ , Englund JA , Hadfield J , Hodcroft EB , Huddleston J , Moncla LH , Müller NF , Neher RA , Deng X , Gu W , Federman S , Chiu C , Duchin JS , Gautom R , Melly G , Hiatt B , Dykema P , Lindquist S , Queen K , Tao Y , Uehara A , Tong S , MacCannell D , Armstrong GL , Baird GS , Chu HY , Shendure J , Jerome KR .
Science 2020 370 (6516) 571-575 type
The impact of antimalarial resistance on the genetic structure of Plasmodium falciparum in the DRC.
Verity R , Aydemir O , Brazeau NF , Watson OJ , Hathaway NJ , Mwandagalirwa MK , Marsh PW , Thwai K , Fulton T , Denton M , Morgan AP , Parr JB , Tumwebaze PK , Conrad M , Rosenthal PJ , Ishengoma DS , Ngondi J , Gutman J , Mulenga M , Norris DE , Moss WJ , Mensah BA , Myers-Hansen JL , Ghansah A , Tshefu AK , Ghani AC , Meshnick SR , Bailey JA , Juliano JJ .
Nat Commun 2020 11 (1) 2107 type
Analysis of the reiteration regions (R1 to R5) of varicella-zoster virus.
Jensen NJ , Depledge DP , Ng TFF , Leung J , Quinlivan M , Radford KW , Folster J , Tseng HF , LaRussa P , Jacobsen SJ , Breuer J , Schmid DS .
Virology 2020 546 38-50 type
Using an Established Outbreak Response Plan and Molecular Epidemiology Methods in an HIV Transmission Cluster Investigation, Tennessee, January-June 2017.
Sizemore L , Fill MM , Mathieson SA , Black J , Brantley M , Cooper K , Garrett J , Switzer WM , Peters PJ , Wester C .
Public Health Rep 2020 135 (3) 33354920915445 type
Phylodynamic Analysis Complements Partner Services by Identifying Acute and Unreported HIV Transmission.
Campbell EM , Patala A , Shankar A , Li JF , Johnson JA , Westheimer E , Gay CL , Cohen SE , Switzer WM , Peters PJ .
Viruses 2020 12 (2) type
Successful isolation of Treponema pallidum strains from patients' cryopreserved ulcer exudate using the rabbit model.
Pereira LE , Katz SS , Sun Y , Mills P , Taylor W , Atkins P , Thurlow CM , Chi KH , Danavall D , Cook N , Ahmed T , Debra A , Philip S , Cohen S , Workowski KA , Kersh E , Fakile Y , Chen CY , Pillay A .
PLoS One 2020 15 (1) e0227769 type
Opioid Use Fueling HIV Transmission in an Urban Setting: An Outbreak of HIV Infection Among People Who Inject Drugs-Massachusetts, 2015-2018.
Alpren C , Dawson EL , John B , Cranston K , Panneer N , Fukuda HD , Roosevelt K , Klevens RM , Bryant J , Peters PJ , Lyss SB , Switzer W , Burrage A , Murray A , Agnew-Brune C , Stiles T , McClung P , Campbell EM , Breen C , Randall LM , Dasgupta S , Onofrey S , Bixler D , Hampton K , Jaeger JL , Hsu KK , Adih W , Callis B , Goldman LR , Danner SP , Jia H , Tumpney M , Board A , Brown C , DeMaria A Jr , Buchacz K .
Am J Public Health 2019 110 (1) e1-e8 type
Genome-wide association studies of structural birth defects: A review and commentary.
Lupo PJ , Mitchell LE , Jenkins MM .
Birth Defects Res 2019 111 (18) 1329-1342
HIV-1 genetic diversity to estimate time of infection and infer adherence to preexposure prophylaxis.
Council OD , Ruone S , Mock PA , Khalil G , Martin A , Curlin ME , McNicholl JM , Heneine W , Leelawiwat W , Choopanya K , Vanichseni S , Cherdtrakulkiat T , Anekvorapong R , Martin M , Garcia-Lerma JG .
AIDS 2019 33 (15) 2299-2307 type
HIV-1 genetic diversity to estimate time of infection and infer adherence to pre-exposure prophylaxis.
Council OD , Ruone S , Mock PA , Khalil G , Martin A , Curlin ME , McNicholl JM , Heneine W , Leelawiwat W , Choopanya K , Vanichseni S , Cherdtrakulkiat T , Anekvorapong R , Martin M , Garcia-Lerma JG .
AIDS 2019 33 (15) 2299-2307 type
Rapid Identification and Investigation of an HIV Risk Network Among People Who Inject Drugs -Miami, FL, 2018.
Tookes H , Bartholomew TS , Geary S , Matthias J , Poschman K , Blackmore C , Philip C , Suarez E , Forrest DW , Rodriguez AE , Kolber MA , Knaul F , Colucci L , Spencer E .
AIDS Behav 2019 24 (1) 246-256 type
Exome sequencing of family trios from the National Birth Defects Prevention Study: Tapping into a rich resource of genetic and environmental data.
Jenkins MM , Almli LM , Pangilinan F , Chong JX , Blue EE , Shapira SK , White J , McGoldrick D , Smith JD , Mullikin JC , Bean CJ , Nembhard WN , Lou XY , Shaw GM , Romitti PA , Keppler-Noreuil K , Yazdy MM , Kay DM , Carter TC , Olshan AF , Moore KJ , Nascone-Yoder N , Finnell RH , Lupo PJ , Feldkamp ML , Nickerson DA , Bamshad MJ , Brody LC , Reefhuis J .
Birth Defects Res 2019 111 (20) 1618-1632
Increased discrimination of Treponema pallidum strains by subtyping with a four-component system incorporating a mononucleotide tandem repeat in rspA.
Pillay A , Lee MK , Slezak T , Katz SS , Sun Y , Chi KH , Morshed M , Philip S , Ballard RC , Chen CY .
Sex Transm Dis 2019 46 (4) e42-e45 type
Hepatitis C virus infection among people who inject drugs in Bangkok, Thailand, 2005-2010.
Martin M , Vanichseni S , Leelawiwat W , Anekvorapong R , Raengsakulrach B , Cherdtrakulkiat T , Sangkum U , Mock PA , Leethochawalit M , Chiamwongpaet S , McNicholl JM , Kittimunkong S , Curlin ME , Choopanya K .
WHO South East Asia J Public Health 2019 8 (1) 50-55 type
Genetic Meningococcal Antigen Typing System (gMATS): A genotyping tool that predicts 4CMenB strain coverage worldwide.
Muzzi A , Brozzi A , Serino L , Bodini M , Abad R , Caugant D , Comanducci M , Lemos AP , Gorla MC , Krizova P , Mikula C , Mulhall R , Nissen M , Nohynek H , Simoes MJ , Skoczynska A , Stefanelli P , Taha MK , Toropainen M , Tzanakaki G , Vadivelu-Pechai K , Watson P , Vazquez JA , Rajam G , Rappuoli R , Borrow R , Medini D .
Vaccine 2019 37 (7) 991-1000
A large HCV transmission network enabled a fast-growing HIV outbreak in rural Indiana, 2015.
Ramachandran S , Thai H , Forbi JC , Galang RR , Dimitrova Z , Xia GL , Lin Y , Punkova LT , Pontones PR , Gentry J , Blosser SJ , Lovchik J , Switzer WM , Teshale E , Peters P , Ward J , Khudyakov Y .
EBioMedicine 2018 37 374-381 type
Molecular assays for antimalarial drug resistance surveillance: A target product profile.
Nsanzabana C , Ariey F , Beck HP , Ding XC , Kamau E , Krishna S , Legrand E , Lucchi N , Miotto O , Nag S , Noedl H , Roper C , Rosenthal PJ , Schallig Hdfh , Taylor SM , Volkman SK , Gonzalez IJ .
PLoS One 2018 13 (9) e0204347
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