CDC-Authored Genomics and Precision Health Publications Database
Last data update: Sep 03, 2024. (Total: 6282 publications)
Query Trace: Paul P[original query] |
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Travel surveillance uncovers dengue virus dynamics and introductions in the Caribbean
Taylor-Salmon E , Hill V , Paul LM , Koch RT , Breban MI , Chaguza C , Sodeinde A , Warren JL , Bunch S , Cano N , Cone M , Eysoldt S , Garcia A , Gilles N , Hagy A , Heberlein L , Jaber R , Kassens E , Colarusso P , Davis A , Baudin S , Rico E , Mejía-Echeverri Á , Scott B , Stanek D , Zimler R , Muñoz-Jordán JL , Santiago GA , Adams LE , Paz-Bailey G , Spillane M , Katebi V , Paulino-Ramírez R , Mueses S , Peguero A , Sánchez N , Norman FF , Galán JC , Huits R , Hamer DH , Vogels CBF , Morrison A , Michael SF , Grubaugh ND . Nat Commun 2024 15 (1) 3508 ![]() |
Introduction and spread of Dengue virus 3, Florida, USA, May 2022-April 2023
Jones FK , Morrison AM , Santiago GA , Rysava K , Zimler RA , Heberlein LA , Kopp E , Saunders KE , Baudin S , Rico E , Mejía-Echeverri Á , Taylor-Salmon E , Hill V , Breban MI , Vogels CBF , Grubaugh ND , Paul LM , Michael SF , Johansson MA , Adams LE , Munoz-Jordan J , Paz-Bailey G , Stanek DR . Emerg Infect Dis 2024 30 (2) 376-379 ![]() |
Rapid outbreak sequencing of Ebola virus in Sierra Leone identifies transmission chains linked to sporadic cases.
Arias A , Watson SJ , Asogun D , Tobin EA , Lu J , Phan MVT , Jah U , Wadoum REG , Meredith L , Thorne L , Caddy S , Tarawalie A , Langat P , Dudas G , Faria NR , Dellicour S , Kamara A , Kargbo B , Kamara BO , Gevao S , Cooper D , Newport M , Horby P , Dunning J , Sahr F , Brooks T , Simpson AJH , Groppelli E , Liu G , Mulakken N , Rhodes K , Akpablie J , Yoti Z , Lamunu M , Vitto E , Otim P , Owilli C , Boateng I , Okoror L , Omomoh E , Oyakhilome J , Omiunu R , Yemisis I , Adomeh D , Ehikhiametalor S , Akhilomen P , Aire C , Kurth A , Cook N , Baumann J , Gabriel M , Wölfel R , Di Caro A , Carroll MW , Günther S , Redd J , Naidoo D , Pybus OG , Rambaut A , Kellam P , Goodfellow I , Cotten M . Virus Evol 2016 2 (1) vew016 |
Molecular epidemiology: linking molecular scale insights to population impacts.
Schulte PA , Rothman N , Hainaut P , Smith MT , Boffetta P , Perera FP . IARC Sci Publ 2011 (163) 1-7 |
Epidemiologic and genetic characteristics of mumps viruses isolated in China from 1995 to 2010.
Cui A , Zhu Z , Chen M , Zheng H , Liu L , Wang Y , Ma Y , Wang C , Fang X , Li P , Guan R , Wang S , Zhou J , Zheng L , Gao H , Ding Z , Li L , Bo F , Sun Z , Zhang Z , Feng D , He J , Chen H , Jin L , Rota PA , Xu W . Infect Genet Evol 2014 21 384-90 |
Factors affecting maternal participation in the genetic component of the National Birth Defects Prevention Study-United States, 1997-2007.
Glidewell J , Reefhuis J , Rasmussen SA , Woomert A , Hobbs C , Romitti PA , Crider KS . Genet Med 2014 16 (4) 329-37 |
Phenylketonuria Scientific Review Conference: state of the science and future research needs.
Camp KM , Parisi MA , Acosta PB , Berry GT , Bilder DA , Blau N , Bodamer OA , Brosco JP , Brown CS , Burlina AB , Burton BK , Chang CS , Coates PM , Cunningham AC , Dobrowolski SF , Ferguson JH , Franklin TD , Frazier DM , Grange DK , Greene CL , Groft SC , Harding CO , Howell RR , Huntington KL , Hyatt-Knorr HD , Jevaji IP , Levy HL , Lichter-Konecki U , Lindegren ML , Lloyd-Puryear MA , Matalon K , MacDonald A , McPheeters ML , Mitchell JJ , Mofidi S , Moseley KD , Mueller CM , Mulberg AE , Nerurkar LS , Ogata BN , Pariser AR , Prasad S , Pridjian G , Rasmussen SA , Reddy UM , Rohr FJ , Singh RH , Sirrs SM , Stremer SE , Tagle DA , Thompson SM , Urv TK , Utz JR , van Spronsen F , Vockley J , Waisbren SE , Weglicki LS , White DA , Whitley CB , Wilfond BS , Yannicelli S , Young JM . Mol Genet Metab 2014 112 (2) 87-122 |
Evaluation of the US COVID-19 Scenario Modeling Hub for informing pandemic response under uncertainty
Howerton E , Contamin L , Mullany LC , Qin M , Reich NG , Bents S , Borchering RK , Jung SM , Loo SL , Smith CP , Levander J , Kerr J , Espino J , van Panhuis WG , Hochheiser H , Galanti M , Yamana T , Pei S , Shaman J , Rainwater-Lovett K , Kinsey M , Tallaksen K , Wilson S , Shin L , Lemaitre JC , Kaminsky J , Hulse JD , Lee EC , McKee CD , Hill A , Karlen D , Chinazzi M , Davis JT , Mu K , Xiong X , Pastore YPiontti A , Vespignani A , Rosenstrom ET , Ivy JS , Mayorga ME , Swann JL , España G , Cavany S , Moore S , Perkins A , Hladish T , Pillai A , Ben Toh K , Longini I Jr , Chen S , Paul R , Janies D , Thill JC , Bouchnita A , Bi K , Lachmann M , Fox SJ , Meyers LA , Srivastava A , Porebski P , Venkatramanan S , Adiga A , Lewis B , Klahn B , Outten J , Hurt B , Chen J , Mortveit H , Wilson A , Marathe M , Hoops S , Bhattacharya P , Machi D , Cadwell BL , Healy JM , Slayton RB , Johansson MA , Biggerstaff M , Truelove S , Runge MC , Shea K , Viboud C , Lessler J . Nat Commun 2023 14 (1) 7260 |
Effectiveness of self-collected, ambient temperature-preserved nasal swabs compared to samples collected by trained staff for genotyping of respiratory viruses by shotgun RNA sequencing: Comparative study
Soto R , Paul L , Porucznik CA , Xie H , Stinnett RC , Briggs B , Biggerstaff M , Stanford J , Schlaberg R . JMIR Form Res 2023 7 e32848 ![]() |
Measles virus transmission patterns and public health responses during Operation Allies Welcome: a descriptive epidemiological study
Masters NB , Beck AS , Mathis AD , Leung J , Raines K , Paul P , Stanley SE , Weg AL , Pieracci EG , Gearhart S , Jumabaeva M , Bankamp B , Rota PA , Sugerman DE , Gastañaduy PA . Lancet Public Health 2023 8 (8) e618-e628 ![]() |
Genomic surveillance for SARS-CoV-2 variants: Circulation of Omicron lineages - United States, January 2022-May 2023
Ma KC , Shirk P , Lambrou AS , Hassell N , Zheng XY , Payne AB , Ali AR , Batra D , Caravas J , Chau R , Cook PW , Howard D , Kovacs NA , Lacek KA , Lee JS , MacCannell DR , Malapati L , Mathew S , Mittal N , Nagilla RR , Parikh R , Paul P , Rambo-Martin BL , Shepard SS , Sheth M , Wentworth DE , Winn A , Hall AJ , Silk BJ , Thornburg N , Kondor R , Scobie HM , Paden CR . MMWR Morb Mortal Wkly Rep 2023 72 (24) 651-656 |
Human plague: An old scourge that needs new answers.
Vallès X , Stenseth NC , Demeure C , Horby P , Mead PS , Cabanillas O , Ratsitorahina M , Rajerison M , Andrianaivoarimanana V , Ramasindrazana B , Pizarro-Cerda J , Scholz HC , Girod R , Hinnebusch BJ , Vigan-Womas I , Fontanet A , Wagner DM , Telfer S , Yazdanpanah Y , Tortosa P , Carrara G , Deuve J , Belmain SR , D'Ortenzio E , Baril L . PLoS Negl Trop Dis 2020 14 (8) e0008251 ![]() |
Mosquito microevolution drives Plasmodium falciparum dynamics.
Gildenhard M , Rono EK , Diarra A , Boissière A , Bascunan P , Carrillo-Bustamante P , Camara D , Krüger H , Mariko M , Mariko R , Mireji P , Nsango SE , Pompon J , Reis Y , Rono MK , Seda PB , Thailayil J , Traorè A , Yapto CV , Awono-Ambene P , Dabiré RK , Diabaté A , Masiga D , Catteruccia F , Morlais I , Diallo M , Sangare D , Levashina EA . Nat Microbiol 2019 4 (6) 941-947 ![]() |
Spike Gene Target Amplification in a Diagnostic Assay as a Marker for Public Health Monitoring of Emerging SARS-CoV-2 Variants - United States, November 2021-January 2023.
Scobie HM , Ali AR , Shirk P , Smith ZR , Paul P , Paden CR , Hassell N , Zheng XY , Lambrou AS , Kondor R , MacCannell D , Thornburg NJ , Miller J , Wentworth D , Silk BJ . MMWR Morb Mortal Wkly Rep 2023 72 (5) 125-127 ![]() |
Impact of SARS-CoV-2 vaccination of children ages 5-11 years on COVID-19 disease burden and resilience to new variants in the United States, November 2021-March 2022: A multi-model study.
Borchering RK , Mullany LC , Howerton E , Chinazzi M , Smith CP , Qin M , Reich NG , Contamin L , Levander J , Kerr J , Espino J , Hochheiser H , Lovett K , Kinsey M , Tallaksen K , Wilson S , Shin L , Lemaitre JC , Hulse JD , Kaminsky J , Lee EC , Hill AL , Davis JT , Mu K , Xiong X , Pastore YPiontti A , Vespignani A , Srivastava A , Porebski P , Venkatramanan S , Adiga A , Lewis B , Klahn B , Outten J , Hurt B , Chen J , Mortveit H , Wilson A , Marathe M , Hoops S , Bhattacharya P , Machi D , Chen S , Paul R , Janies D , Thill JC , Galanti M , Yamana T , Pei S , Shaman J , España G , Cavany S , Moore S , Perkins A , Healy JM , Slayton RB , Johansson MA , Biggerstaff M , Shea K , Truelove SA , Runge MC , Viboud C , Lessler J . Lancet Reg Health Am 2023 17 100398 |
Modeling the effectiveness of healthcare personnel reactive testing and screening for the SARS-CoV-2 Omicron variant within nursing homes.
Zipfel CM , Paul P , Gowler CD , Reddy SC , Stone ND , Jacobs Slifka K , Slayton RB . Clin Infect Dis 2022 75 S225-S230 |
Projected resurgence of COVID-19 in the United States in July-December 2021 resulting from the increased transmissibility of the Delta variant and faltering vaccination.
Truelove S , Smith CP , Qin M , Mullany LC , Borchering RK , Lessler J , Shea K , Howerton E , Contamin L , Levander J , Salerno J , Hochheiser H , Kinsey M , Tallaksen K , Wilson S , Shin L , Rainwater-Lovett K , Lemairtre JC , Dent Hulse J , Kaminsky J , Lee EC , Perez-Saez J , Hill A , Karlen D , Chinazzi M , Davis JT , Mu K , Xiong X , Pastore YPiontti A , Vespignani A , Srivastava A , Porebski P , Venkatramanan S , Adiga A , Lewis B , Klahn B , Outten J , Orr M , Harrison G , Hurt B , Chen J , Vullikanti A , Marathe M , Hoops S , Bhattacharya P , Machi D , Chen S , Paul R , Janies D , Thill JC , Galanti M , Yamana TK , Pei S , Shaman JL , Healy JM , Slayton RB , Biggerstaff M , Johansson MA , Runge MC , Viboud C . Elife 2022 11 ![]() |
Viral Shedding Kinetics and Transmission of Emerging SARS-CoV-2 Variants-Critical Components of Study Design.
Gowler CD , Paul P , Reddy SC . JAMA Netw Open 2022 5 (5) e2213614 ![]() |
Divergent Rabies Virus Variant of Probable Bat Origin in 2 Gray Foxes, New Mexico, USA.
Condori Rene E, Aragon Adam, Breckenridge Mike, Pesko Kendra, Mower Kerry, Ettestad Paul, Melman Sandra, Velasco-Villa Andres, Orciari Lillian A, Yager Pamela, Streicker Daniel G, Gigante Crystal M, Morgan Clint, Wallace Ryan, Li Yu. Emerging infectious diseases 2022 28(6) 1137-1145 . Emerging infectious diseases 2022 28(6) 1137-1145 ![]() |
HISTOLOGIC LESIONS IN PLACENTAS OF NORTHERN FUR SEALS (CALLORHINUS URSINUS) FROM A POPULATION WITH HIGH PLACENTAL PREVALENCE OF COXIELLA BURNETII.
Conway R , Duncan C , Foster RA , Kersh GJ , Raverty S , Gelatt T , Frank C . J Wildl Dis 2022 58 (2) 333-340 |
Genomic Surveillance for SARS-CoV-2 Variants: Predominance of the Delta (B.1.617.2) and Omicron (B.1.1.529) Variants - United States, June 2021-January 2022.
Lambrou AS , Shirk P , Steele MK , Paul P , Paden CR , Cadwell B , Reese HE , Aoki Y , Hassell N , Caravas J , Kovacs NA , Gerhart JG , Ng HJ , Zheng XY , Beck A , Chau R , Cintron R , Cook PW , Gulvik CA , Howard D , Jang Y , Knipe K , Lacek KA , Moser KA , Paskey AC , Rambo-Martin BL , Nagilla RR , Rethchless AC , Schmerer MW , Seby S , Shephard SS , Stanton RA , Stark TJ , Uehara A , Unoarumhi Y , Bentz ML , Burhgin A , Burroughs M , Davis ML , Keller MW , Keong LM , Le SS , Lee JS , Madden Jr JC , Nobles S , Owouor DC , Padilla J , Sheth M , Wilson MM , Talarico S , Chen JC , Oberste MS , Batra D , McMullan LK , Halpin AL , Galloway SE , MacCannell DR , Kondor R , Barnes J , MacNeil A , Silk BJ , Dugan VG , Scobie HM , Wentworth DE . MMWR Morb Mortal Wkly Rep 2022 71 (6) 206-211 ![]() |
Implementation of the Ebola Virus Persistence in Ocular Tissues and Fluids (EVICT) study: Lessons learned for vision health systems strengthening in Sierra Leone.
Shantha JG , Crozier I , Kraft CS , Grant DG , Goba A , Hayek BR , Hartley C , Barnes KG , Uyeki TM , Schieffelin J , Garry RF , Bausch DG , Farmer PE , Mattia JG , Vandy MJ , Yeh S . PLoS One 2021 16 (7) e0252905 ![]() |
Transmitted Drug Resistance Among HIV-1 Diagnoses in the United States, 2014-2018.
McClung RP , Oster AM , Ocfemia MCB , Saduvala N , Heneine W , Johnson JA , Hernandez AL . Clin Infect Dis 2021 74 (6) 1055-1062 ![]() |
Patterns of antibiotic nonsusceptibility among invasive group A Streptococcus infections-United States, 2006-2017.
Fay K , Onukwube J , Chochua S , Schaffner W , Cieslak P , Lynfield R , Muse A , Smelser C , Harrison LH , Farley M , Petit S , Alden N , Apostal M , Vagnone PS , Nanduri S , Beall B , Van Beneden CA . Clin Infect Dis 2021 73 (11) 1957-1964 ![]() |
Population analysis of Vibrio cholerae in aquatic reservoirs reveals a novel sister species (Vibrio paracholerae sp. nov.) with a history of association with humans.
Islam MT , Nasreen T , Kirchberger P , Liang KYH , Orata FD , Johura FT , Hussain NAS , Im MS , Tarr CL , Alam M , Boucher YF . Appl Environ Microbiol 2021 87 (17) Aem0042221 ![]() |
Managing biological variation data: modern approaches for study design and clinical application.
Johnson PR , Shahangian S , Astles JR . Crit Rev Clin Lab Sci 2021 58 (7) 1-20 |
Granulomatous Dermatitis Associated With Rubella Virus Infection in an Adult With Immunodeficiency.
Shields BE , Perelygina L , Samimi S , Haun P , Leung T , Abernathy E , Chen MH , Hao L , Icenogle J , Drolet B , Wilson B , Bryer JS , England R , Blumberg E , Wanat KA , Sullivan K , Rosenbach M . JAMA Dermatol 2021 157 (7) 842-847 |
The CDC HIV Outbreak Coordination Unit: Developing a Standardized, Collaborative Approach to HIV Outbreak Assessment and Response.
Oster AM , France AM , McClung RP , Buchacz K , Lyss SB , Peters PJ , Weidle PJ , Switzer WM , Phillip SAJr , Brooks JT , Hernandez AL . Public Health Rep 2021 137 (4) 333549211018678 ![]() |
Epidemiologic characteristics associated with SARS-CoV-2 antigen-based test results, rRT-PCR cycle threshold values, subgenomic RNA, and viral culture results from university testing.
Ford L , Lee C , Pray IW , Cole D , Bigouette JP , Abedi GR , Bushman D , Delahoy MJ , Currie DW , Cherney B , Kirby M , Fajardo G , Caudill M , Langolf K , Kahrs J , Zochert T , Kelly P , Pitts C , Lim A , Aulik N , Tamin A , Harcourt JL , Queen K , Zhang J , Whitaker B , Browne H , Medrzycki M , Shewmaker P , Bonenfant G , Zhou B , Folster J , Bankamp B , Bowen MD , Thornburg NJ , Goffard K , Limbago B , Bateman A , Tate JE , Gieryn D , Kirking HL , Westergaard R , Killerby M . Clin Infect Dis 2021 73 (6) e1348-e1355 |
Progression and transmission of HIV (PATH 4.0)-A new agent-based evolving network simulation for modeling HIV transmission clusters.
Singh S , France AM , Chen YH , Farnham PG , Oster AM , Gopalappa C . Math Biosci Eng 2021 18 (3) 2150-2181 ![]() |
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