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CDC-Authored Genomics and Precision Health Publications Database|Home|PHGKB

CDC-Authored Genomics and Precision Health Publications Database


Last data update: Sep 25, 2023. (Total: 4416 publications since 2011)
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Records 1-30 (of 64 Records)
Query Trace: Park S[original query]
Impact of the COVID-19 Vaccination Program on case incidence, emergency department visits, and hospital admissions among children aged 5-17 Years during the Delta and Omicron Periods-United States, December 2020 to April 2022.
Topf KG , Sheppard M , Marx GE , Wiegand RE , Link-Gelles R , Binder AM , Cool AJ , Lyons BC , Park S , Fast HE , Presnetsov A , Azondekon GR , Soetebier KA , Adjemian J , Barbour KE .
PLoS One 2022 17 (12) e0276409 type
Household characteristics associated with surface contamination of SARS-CoV-2 and frequency of RT-PCR and viral culture positivity-California and Colorado, 2021.
Shragai T , Pratt C , CastroGeorgi J , Donnelly MAP , Schwartz NG , Soto R , Chuey M , Chu VT , Marcenac P , Park GW , Ahmad A , Albanese B , Totten SE , Austin B , Bunkley P , Cherney B , Dietrich EA , Figueroa E , Folster JM , Godino C , Herzegh O , Lindell K , Relja B , Sheldon SW , Tong S , Vinj J , Thornburg NJ , Matanock AM , Hughes LJ , Stringer G , Hudziec M , Beatty ME , Tate JE , Kirking HL , Hsu CH .
PLoS One 2022 17 (10) e0274946 type
Benchmark datasets for SARS-CoV-2 surveillance bioinformatics.
Xiaoli L , Hagey JV , Park DJ , Gulvik CA , Young EL , Alikhan NF , Lawsin A , Hassell N , Knipe K , Oakeson KF , Retchless AC , Shakya M , Lo CC , Chain P , Page AJ , Metcalf BJ , Su M , Rowell J , Vidyaprakash E , Paden CR , Huang AD , Roellig D , Patel K , Winglee K , Weigand MR , Katz LS .
PeerJ 2022 10 e13821 type
Differential neutralization and inhibition of SARS-CoV-2 variants by antibodies elicited by COVID-19 mRNA vaccines.
Wang L , Kainulainen MH , Jiang N , Di H , Bonenfant G , Mills L , Currier M , Shrivastava-Ranjan P , Calderon BM , Sheth M , Mann BR , Hossain J , Lin X , Lester S , Pusch EA , Jones J , Cui D , Chatterjee P , Jenks MH , Morantz EK , Larson GP , Hatta M , Harcourt JL , Tamin A , Li Y , Tao Y , Zhao K , Lacek K , Burroughs A , Wang W , Wilson M , Wong T , Park SH , Tong S , Barnes JR , Tenforde MW , Self WH , Shapiro NI , Exline MC , Files DC , Gibbs KW , Hager DN , Patel M , Halpin AL , McMullan LK , Lee JS , Xia H , Xie X , Shi PY , Davis CT , Spiropoulou CF , Thornburg NJ , Oberste MS , Dugan VG , Wentworth DE , Zhou B .
Nat Commun 2022 13 (1) 4350 type
Wastewater sequencing reveals early cryptic SARS-CoV-2 variant transmission.
Karthikeyan S , Levy JI , DeHoff P , Humphrey G , Birmingham A , Jepsen K , Farmer S , Tubb HM , Valles T , Tribelhorn CE , Tsai R , Aigner S , Sathe S , Moshiri N , Henson B , Mark AM , Hakim A , Baer NA , Barber T , Belda-Ferre P , Chacn M , Cheung W , Cresini ES , Eisner ER , Lastrella AL , Lawrence ES , Marotz CA , Ngo TT , Ostrander T , Plascencia A , Salido RA , Seaver P , Smoot EW , McDonald D , Neuhard RM , Scioscia AL , Satterlund AM , Simmons EH , Abelman DB , Brenner D , Bruner JC , Buckley A , Ellison M , Gattas J , Gonias SL , Hale M , Hawkins F , Ikeda L , Jhaveri H , Johnson T , Kellen V , Kremer B , Matthews G , McLawhon RW , Ouillet P , Park D , Pradenas A , Reed S , Riggs L , Sanders A , Sollenberger B , Song A , White B , Winbush T , Aceves CM , Anderson C , Gangavarapu K , Hufbauer E , Kurzban E , Lee J , Matteson NL , Parker E , Perkins SA , Ramesh KS , Robles-Sikisaka R , Schwab MA , Spencer E , Wohl S , Nicholson L , McHardy IH , Dimmock DP , Hobbs CA , Bakhtar O , Harding A , Mendoza A , Bolze A , Becker D , Cirulli ET , Isaksson M , SchiaborBarrett KM , Washington NL , Malone JD , Schafer AM , Gurfield N , Stous S , Fielding-Miller R , Garfein RS , Gaines T , Anderson C , Martin NK , Schooley R , Austin B , MacCannell DR , Kingsmore SF , Lee W , Shah S , McDonald E , Yu AT , Zeller M , Fisch KM , Longhurst C , Maysent P , Pride D , Khosla PK , Laurent LC , Yeo GW , Andersen KG , Knight R .
Nature 2022 609 (7925) 101-108 type
Risk Factors for Ebola Virus Persistence in Semen of Survivors - Liberia.
Dyal J , Kofman A , Kollie JZ , Fankhauser J , Orone R , Soka MJ , Glaybo U , Kiawu A , Freeman E , Giah G , Tony HD , Faikai M , Jawara M , Kamara K , Kamara S , Flowers B , Kromah ML , Desamu-Thorpe R , Graziano J , Brown S , Morales-Betoulle ME , Cannon DL , Su K , Linderman SL , Plucinski M , Rogier E , Bradbury RS , Secor WE , Bowden KE , Phillips C , Carrington MN , Park YH , Martin MP , DelPilarAguinaga M , Mushi R , Haberling DL , Ervin ED , Klena JD , Massaquoi M , Nyenswah T , Nichol ST , Chiriboga DE , Williams DE , Hinrichs SH , Ahmed R , Vonhm BT , Rollin PE , Purpura LJ , Choi MJ .
Clin Infect Dis 2022 76 (3) e849-e856
PgtE Enzyme of Salmonella enterica Shares the Similar Biological Roles to Plasminogen Activator (Pla) in Interacting With DEC-205 (CD205), and Enhancing Host Dissemination and Infectivity by Yersinia pestis.
Li Q , Ye C , Zhao F , Li W , Zhu S , Lv Y , Park CG , Zhang Y , Jiang LY , Yang K , He Y , Cai H , Zhang S , Ding HH , Njiri OA , Tembo JM , Alkraiem AA , Li AY , Sun ZY , Li W , Yan MY , Kan B , Huo X , Klena JD , Skurnik M , Anisimov AP , Gao X , Han Y , Yang RF , Xiamu X , Wang Y , Chen H , Chai B , Sun Y , Yuan J , Chen T .
Front Immunol 2022 13 791799
Future-proofing and maximizing the utility of metadata: The PHA4GE SARS-CoV-2 contextual data specification package.
Griffiths EJ , Timme RE , Mendes CI , Page AJ , Alikhan NF , Fornika D , Maguire F , Campos J , Park D , Olawoye IB , Oluniyi PE , Anderson D , Christoffels A , daSilva AG , Cameron R , Dooley D , Katz LS , Black A , Karsch-Mizrachi I , Barrett T , Johnston A , Connor TR , Nicholls SM , Witney AA , Tyson GH , Tausch SH , Raphenya AR , Alcock B , Aanensen DM , Hodcroft E , Hsiao WWL , Vasconcelos ATR , MacCannell DR .
Gigascience 2022 11 type
Multiplexed CRISPR-based microfluidic platform for clinical testing of respiratory viruses and identification of SARS-CoV-2 variants.
Welch NL , Zhu M , Hua C , Weller J , Mirhashemi ME , Nguyen TG , Mantena S , Bauer MR , Shaw BM , Ackerman CM , Thakku SG , Tse MW , Kehe J , Uwera MM , Eversley JS , Bielwaski DA , McGrath G , Braidt J , Johnson J , Cerrato F , Moreno GK , Krasilnikova LA , Petros BA , Gionet GL , King E , Huard RC , Jalbert SK , Cleary ML , Fitzgerald NA , Gabriel SB , Gallagher GR , Smole SC , Madoff LC , Brown CM , Keller MW , Wilson MM , Kirby MK , Barnes JR , Park DJ , Siddle KJ , Happi CT , Hung DT , Springer M , MacInnis BL , Lemieux JE , Rosenberg E , Branda JA , Blainey PC , Sabeti PC , Myhrvold C .
Nat Med 2022 28 (5) 1083-1094 type
Side-by-side comparison of parent vs. technician-collected respiratory swabs in low-income, multilingual, urban communities in the United States.
Chaves SS , Park JH , Prill MM , Whitaker B , Park R , Chew GL .
BMC Public Health 2022 22 (1) 103
Comparative Effectiveness and Antibody Responses to Moderna and Pfizer-BioNTech COVID-19 Vaccines among Hospitalized Veterans - Five Veterans Affairs Medical Centers, United States, February 1-September 30, 2021.
Bajema KL , Dahl RM , Evener SL , Prill MM , Rodriguez-Barradas MC , Marconi VC , Beenhouwer DO , Holodniy M , Lucero-Obusan C , Brown ST , Tremarelli M , Epperson M , Mills L , Park SH , Rivera-Dominguez G , Morones RG , Ahmadi-Izadi G , Deovic R , Mendoza C , Jeong C , Schrag SJ , Meites E , Hall AJ , Kobayashi M , McMorrow M , Verani JR , Thornburg NJ , Surie D .
MMWR Morb Mortal Wkly Rep 2021 70 (49) 1700-1705 type
2021 Taxonomic update of phylum Negarnaviricota (Riboviria: Orthornavirae), including the large orders Bunyavirales and Mononegavirales.
Kuhn JH , Adkins S , Agwanda BR , AlKubrusli R , AlkhovskyAxocCepeBapo SV , Amarasinghe GK , Avi-upanc T , Aylln MA , Bahl J , Balkema-Buschmann A , Ballinger MJ , Basler CF , Bavari S , Beer M , Bejerman N , Bennett AJ , Bente DA , Bergeron , Bird BH , Blair CD , Blasdell KR , Blystad DR , Bojko J , Borth WB , Bradfute S , Breyta R , Briese T , Brown PA , Brown JK , Buchholz UJ , Buchmeier MJ , Bukreyev A , Burt F , Bttner C , Calisher CH , Cao M , Casas I , Chandran K , Charrel RN , Cheng Q , Chiaki Y , Chiapello M , Choi IR , Ciuffo M , Clegg JCS , Crozier I , DalB E , delaTorre JC , deLamballerie X , deSwart RL , Debat H , Dheilly NM , DiCicco E , DiPaola N , DiSerio F , Dietzgen RG , Digiaro M , Dolnik O , Drebot MA , Drexler JF , Dundon WG , Duprex WP , Drrwald R , Dye JM , Easton AJ , Ebihara H , Elbeaino T , Ergnay K , Ferguson HW , Fooks AR , Forgia M , Formenty PBH , Frnov J , Freitas-Asta J , Fu J , Frl S , Gago-Zachert S , Go GF , Garca ML , Garca-Sastre A , Garrison AR , Gaskin T , Gonzalez JJ , Griffiths A , Goldberg TL , Groschup MH , Gnther S , Hall RA , Hammond J , Han T , Hepojoki J , Hewson R , Hong J , Hong N , Hongo S , Horie M , Hu JS , Hu T , Hughes HR , Httner F , Hyndman TH , Ilyas M , Jalkanen R , Jing D , Jonson GB , Junglen S , Kadono F , Kaukinen KH , Kawate M , Klempa B , Klingstrm J , Kobinger G , Koloniuk I , Kond H , Koonin EV , Krupovic M , Kubota K , Kurath G , Laenen L , Lambert AJ , Langevin SL , Lee B , Lefkowitz EJ , Leroy EM , Li S , Li L , L J , Liu H , Lukashevich IS , Maes P , deSouza WM , Marklewitz M , Marshall SH , Marzano SL , Massart S , McCauley JW , Melzer M , Mielke-Ehret N , Miller KM , Ming TJ , Mirazimi A , Mordecai GJ , Mhlbach HP , Mhlberger E , Naidu R , Natsuaki T , Navarro JA , NetesovHecoCepeBopo SV , Neumann G , Nowotny N , Nunes MRT , Olmedo-Velarde A , Palacios G , Palls V , Plyi B , Papa A , Paraskevopoulou S , Park AC , Parrish CR , Patterson DA , Pauvolid-Corra A , Pawska JT , Payne S , Peracchio C , Prez DR , Postler TS , Qi L , Radoshitzky SR , Resende RO , Reyes CA , Rima BK , Luna GR , Romanowski V , Rota P , Rubbenstroth D , Rubino L , Runstadler JA , Sabanadzovic S , Sall AA , Salvato MS , Sang R , Sasaya T , Schulze AD , Schwemmle M , Shi M , Sh X , Sh Z , Shimomoto Y , Shirako Y , Siddell SG , Simmonds P , Sironi M , Smagghe G , Smither S , Song JW , Spann K , Spengler JR , Stenglein MD , Stone DM , Sugano J , Suttle CA , Tabata A , Takada A , Takeuchi S , Tchouassi DP , Teffer A , Tesh RB , Thornburg NJ , Tomitaka Y , Tomonaga K , Tordo N , Torto B , Towner JS , Tsuda S , Tu C , Turina M , Tzanetakis IE , Uchida J , Usugi T , Vaira AM , Vallino M , vandenHoogen B , Varsani A , Vasilakis N , Verbeek M , vonBargen S , Wada J , Wahl V , Walker PJ , Wang LF , Wang G , Wang Y , Wang Y , Waqas M , Wi T , Wen S , Whitfield AE , Williams JV , Wolf YI , Wu J , Xu L , Yanagisawa H , Yang C , Yang Z , Zerbini FM , Zhai L , Zhang YZ , Zhang S , Zhang J , Zhang Z , Zhou X .
Arch Virol 2021 166 (12) 3513-3566
The genomic epidemiology of multi-drug resistant invasive non-typhoidal Salmonella in selected sub-Saharan African countries.
Park SE , Pham DT , Pak GD , Panzner U , MariaCruzEspinoza L , vonKalckreuth V , Im J , Mogeni OD , Schtt-Gerowitt H , Crump JA , Breiman RF , Adu-Sarkodie Y , Owusu-Dabo E , Rakotozandrindrainy R , BassiahiSoura A , Aseffa A , Gasmelseed N , Sooka A , Keddy KH , May J , Aaby P , Biggs HM , Hertz JT , Montgomery JM , Cosmas L , Olack B , Fields B , Sarpong N , Razafindrabe TJL , Raminosoa TM , Kabore LP , Sampo E , Teferi M , Yeshitela B , ElTayeb MA , Krumkamp R , Dekker DM , Jaeger A , Tall A , Gassama A , Niang A , Bjerregaard-Andersen M , Lfberg SV , Deerin JF , Park JK , Konings F , Carey ME , VanPuyvelde S , Ali M , Clemens J , Dougan G , Baker S , Marks F .
BMJ Glob Health 2021 6 (8)
Detection of SARS-CoV-2 on Surfaces in Households of Persons with COVID-19.
Marcenac P , Park GW , Duca LM , Lewis NM , Dietrich EA , Barclay L , Tamin A , Harcourt JL , Thornburg NJ , Rispens J , Matanock A , Kiphibane T , Christensen K , Pawloski LC , Fry AM , Hall AJ , Tate JE , Vinj J , Kirking HL , Pevzner E .
Int J Environ Res Public Health 2021 18 (15) type
Comparative Genomic and Transcriptomic Analysis of Naegleria fowleri Clinical and Environmental Isolates.
Joseph SJ , Park S , Kelley A , Roy S , Cope JR , Ali IKM .
mSphere 2021 6 (4) e0063721
Integrated genomic, epidemiologic investigation of Candida auris skin colonization in a skilled nursing facility.
Proctor DM , Dangana T , Sexton DJ , Fukuda C , Yelin RD , Stanley M , Bell PB , Baskaran S , Deming C , Chen Q , Conlan S , Park M , Welsh RM , Vallabhaneni S , Chiller T , Forsberg K , Black SR , Pacilli M , Kong HH , Lin MY , Schoeny ME , Litvintseva AP , Segre JA , Hayden MK .
Nat Med 2021 27 (8) 1401-1409
Antimicrobial Resistance Creates Threat to Chimpanzee Health and Conservation in the Wild.
Parsons MB , Travis DA , Lonsdorf EV , Lipende I , Elchoufi D , Gilagiza B , Collins A , Kamenya S , Tauxe RV , Gillespie TR .
Pathogens 2021 10 (4)
Draft Chromosome Sequences of a Clinical Isolate of the Free-Living Ameba Naegleria fowleri.
Ali IKM , Kelley A , Joseph SJ , Park S , Roy S , Jackson J , Cope JR , Rowe LA , Burroughs M , Sheth M , Batra D , Loparev V .
Microbiol Resour Announc 2021 10 (15)
Investigation of bacterial and fungal communities in indoor and outdoor air of elementary school classrooms by 16S rRNA gene and ITS region sequencing.
Lee BG , Yang JI , Kim E , Geum SW , Park JH , Yeo MK .
Indoor Air 2021 31 (5) 1553-1562
Trends in Hepatocellular Carcinoma Incidence and Risk Among Persons With HIV in the US and Canada, 1996-2015.
Sun J , Althoff KN , Jing Y , Horberg MA , Buchacz K , Gill MJ , Justice AC , Rabkin CS , Goedert JJ , Sigel K , Cachay E , Park L , Lim JK , Kim HN , LoRe V 3rd , Moore R , Sterling T , Peters MG , Achenbach CJ , Silverberg M , Thorne JE , Mayor AM , Crane HM , Kitahata MM , Klein M , Kirk GD .
JAMA Netw Open 2021 4 (2) e2037512
Loss of the virulence plasmid by Shigella sonnei promotes its interactions with CD207 and CD209 receptors
Wu BC , Olivia NA , Tembo JM , He YX , Zhang YM , Xue Y , Ye CL , Lv Y , Li WJ , Jiang LY , Huo XX , Sun ZY , Chen ZJ , Qin JC , Li AY , Park CG , Klena JD , Ding HH , Chen T .
J Med Microbiol 2021 70 (3)
Bacterial community assemblages in classroom floor dust of 50 public schools in a large city: characterization using 16S rRNA sequences and associations with environmental factors.
Park JH , Lemons AR , Roseman J , Green BJ , Cox-Ganser JM .
Microbiome 2021 9 (1) 15
Genomic surveillance reveals multiple introductions of SARS-CoV-2 into Northern California.
Deng X , Gu W , Federman S , duPlessis L , Pybus OG , Faria N , Wang C , Yu G , Bushnell B , Pan CY , Guevara H , Sotomayor-Gonzalez A , Zorn K , Gopez A , Servellita V , Hsu E , Miller S , Bedford T , Greninger AL , Roychoudhury P , Starita LM , Famulare M , Chu HY , Shendure J , Jerome KR , Anderson C , Gangavarapu K , Zeller M , Spencer E , Andersen KG , MacCannell D , Paden CR , Li Y , Zhang J , Tong S , Armstrong G , Morrow S , Willis M , Matyas BT , Mase S , Kasirye O , Park M , Masinde G , Chan C , Yu AT , Chai SJ , Villarino E , Bonin B , Wadford DA , Chiu CY .
Science 2020 369 (6503) 582-587 type
Anti-PfGARP activates programmed cell death of parasites and reduces severe malaria.
Raj DK , DasMohapatra A , Jnawali A , Zuromski J , Jha A , Cham-Kpu G , Sherman B , Rudlaff RM , Nixon CE , Hilton N , Oleinikov AV , Chesnokov O , Merritt J , Pond-Tor S , Burns L , Jolly G , BenMamoun C , Kabyemela E , Muehlenbachs A , Lambert L , Orr-Gonzalez S , Gnadig NF , Fidock DA , Park S , Dvorin JD , Pardi N , Weissman D , Mui BL , Tam YK , Friedman JF , Fried M , Duffy PE , Kurtis JD .
Nature 2020 582 (7810) 104-108
Development of a workflow for identification of nuclear genotyping markers for Cyclospora cayetanensis.
Houghton KA , Lomsadze A , Park S , Nascimento FS , Barratt J , Arrowood MJ , VanRoey E , Talundzic E , Borodovsky M , Qvarnstrom Y .
Parasite 2020 27 24
Combining genomics and epidemiology to track mumps virus transmission in the United States.
Wohl S , Metsky HC , Schaffner SF , Piantadosi A , Burns M , Lewnard JA , Chak B , Krasilnikova LA , Siddle KJ , Matranga CB , Bankamp B , Hennigan S , Sabina B , Byrne EH , McNall RJ , Shah RR , Qu J , Park DJ , Gharib S , Fitzgerald S , Barreira P , Fleming S , Lett S , Rota PA , Madoff LC , Yozwiak NL , MacInnis BL , Smole S , Grad YH , Sabeti PC .
PLoS Biol 2020 18 (2) e3000611
An Isothermal, Multiplex Amplification Assay for Detection and Genotyping of Human Papillomaviruses in Formalin-Fixed, Paraffin-Embedded Tissues.
Tang YW , Lozano L , Chen X , Querec TD , Katabi N , Moreno-Docon A , Wang H , Fix D , DeBrot L , McMillen TA , Yoon JY , Torroba A , Wang Y , Unger ER , Park KJ .
J Mol Diagn 2020 22 (3) 419-428
Bloodmeal, Host Selection, and Genetic Admixture Analyses of Culex pipiens Complex (Diptera: Culicidae) Mosquitoes in Chicago, IL.
Kothera L , Mutebi JP , Kenney JL , Saxton-Shaw K , Ward MP , Savage HM .
J Med Entomol 2019 57 (1) 78-87
Genotyping Genetically Heterogeneous Cyclospora cayetanensis Infections to Complement Epidemiological Case Linkage.
Barratt JLN , Park S , Nascimento FS , Hofstetter J , Plucinski M , Casillas S , Bradbury RS , Arrowood MJ , Qvarnstrom Y , Talundzic E .
Parasitology 2019 146 (10) 1-33
Technology for the prevention of antimicrobial resistance and healthcare-associated infections; 2017 Geneva IPC-Think Tank (Part 2).
Zingg W , Park BJ , Storr J , Ahmad R , Tarrant C , Castro-Sanchez E , Perencevich E , Widmer A , Krause KH , Kilpatrick C , Tomczyk S , Allegranzi B , Cardo D , Pittet D .
Antimicrob Resist Infect Control 2019 8 83
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