CDC-Authored Genomics and Precision Health Publications Database

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Last data update: Nov 04, 2024. (Total: 6390 publications)

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Records 1-30 (of 45 Records)

Query Trace: Nicholson A[original query]
The global measles and rubella laboratory network supports high-quality surveillance Rota PA , Evans R , Ben Mamou MC , Rey-Benito G , Sangal L , Dosseh A , Ghoniem A , Byabamazima CR , Demanou M , Anderson R , Kim G , Bankamp B , Beard RS , Crooke SN , Ramachandran S , Penedos A , Stambos V , Nicholson S , Featherstone D , Mulders MN . Vaccines (Basel) 2024 12 (8)
Applying MALDI-TOF MS to resolve morphologic and genetic similarities between two Dermacentor tick species of public health importance Galletti Mfbm , Hecht JA , McQuiston JR , Gartin J , Cochran J , Blocher BH , Ayres BN , Allerdice MEJ , Beati L , Nicholson WL , Snellgrove AN , Paddock CD . Sci Rep 2024 14 (1) 19834
Metagenomic detection of bacterial zoonotic pathogens among febrile patients, Tanzania, 2007-2009 Rolfe RJ , Sheldon SW , Kingry LC , Petersen JM , Maro VP , Kinabo GD , Saganda W , Maze MJ , Halliday JEB , Nicholson WL , Galloway RL , Rubach MP , Crump JA . Emerg Infect Dis 2024 30 (8) 1599-1608
Detection of an emerging pathogen: A real time qualitative pcr assay targeting Haematospirillum jordaniae for EDTA whole blood and plasma clinical specimens Szewc AM , Humrighouse BW , Livingston K , Gulvik CA , Nicholson AC , McQuiston JR . Diagn Microbiol Infect Dis 2024 109 (4) 116310
A mutation associated with resistance to synthetic pyrethroids is widespread in US populations of the tropical lineage of Rhipicephalus sanguineus s.l Stone NE , Ballard R , Bourgeois RM , Pemberton GL , McDonough RF , Ruby MC , Backus LH , López-Pérez AM , Lemmer D , Koch Z , Brophy M , Paddock CD , Kersh GJ , Nicholson WL , Sahl JW , Busch JD , Salzer JS , Foley JE , Wagner DM . Ticks Tick Borne Dis 2024 15 (4) 102344
A genetic locus in Elizabethkingia anophelis associated with elevated vancomycin resistance and multiple antibiotic reduced susceptibility Johnson WL , Gupta SK , Maharjan S , Morgenstein RM , Nicholson AC , McQuiston JR , Gustafson JE . Antibiotics (Basel) 2024 13 (1)
Host-response transcriptional biomarkers accurately discriminate bacterial and viral infections of global relevance Ko ER , Reller ME , Tillekeratne LG , Bodinayake CK , Miller C , Burke TW , Henao R , McClain MT , Suchindran S , Nicholson B , Blatt A , Petzold E , Tsalik EL , Nagahawatte A , Devasiri V , Rubach MP , Maro VP , Lwezaula BF , Kodikara-Arachichi W , Kurukulasooriya R , De Silva AD , Clark DV , Schully KL , Madut D , Dumler JS , Kato C , Galloway R , Crump JA , Ginsburg GS , Minogue TD , Woods CW . Sci Rep 2023 13 (1) 22554
The relationship between the intestinal microbiome and body mass index in children with cystic fibrosis Bernard R , Shilts MH , Strickland BA , Boone HH , Payne DC , Brown RF , Edwards K , Das SR , Nicholson MR . J Cyst Fibros 2023
Using next generation sequencing for molecular detection and differentiation of Anaplasma phagocytophilum variants from host seeking Ixodes scapularis ticks in the United States. Hojgaard A , Osikowicz LM , Rizzo MF , Ayres BN , Nicholson WL , Eisen RJ . Ticks Tick Borne Dis 2022 13 (6) 102041
Changing Diagnostic Testing Practices for Foodborne Pathogens, Foodborne Diseases Active Surveillance Network, 2012-2019. Ray LC , Griffin PM , Wymore K , Wilson E , Hurd S , LaClair B , Wozny S , Eikmeier D , Nicholson C , Burzlaff K , Hatch J , Fankhauser M , Kubota K , Huang JY , Geissler A , Payne DC , Tack DM . Open Forum Infect Dis 2022 9 (8) ofac344
Wastewater sequencing reveals early cryptic SARS-CoV-2 variant transmission. Karthikeyan S , Levy JI , De Hoff P , Humphrey G , Birmingham A , Jepsen K , Farmer S , Tubb HM , Valles T , Tribelhorn CE , Tsai R , Aigner S , Sathe S , Moshiri N , Henson B , Mark AM , Hakim A , Baer NA , Barber T , Belda-Ferre P , Chacón M , Cheung W , Cresini ES , Eisner ER , Lastrella AL , Lawrence ES , Marotz CA , Ngo TT , Ostrander T , Plascencia A , Salido RA , Seaver P , Smoot EW , McDonald D , Neuhard RM , Scioscia AL , Satterlund AM , Simmons EH , Abelman DB , Brenner D , Bruner JC , Buckley A , Ellison M , Gattas J , Gonias SL , Hale M , Hawkins F , Ikeda L , Jhaveri H , Johnson T , Kellen V , Kremer B , Matthews G , McLawhon RW , Ouillet P , Park D , Pradenas A , Reed S , Riggs L , Sanders A , Sollenberger B , Song A , White B , Winbush T , Aceves CM , Anderson C , Gangavarapu K , Hufbauer E , Kurzban E , Lee J , Matteson NL , Parker E , Perkins SA , Ramesh KS , Robles-Sikisaka R , Schwab MA , Spencer E , Wohl S , Nicholson L , McHardy IH , Dimmock DP , Hobbs CA , Bakhtar O , Harding A , Mendoza A , Bolze A , Becker D , Cirulli ET , Isaksson M , Schiabor Barrett KM , Washington NL , Malone JD , Schafer AM , Gurfield N , Stous S , Fielding-Miller R , Garfein RS , Gaines T , Anderson C , Martin NK , Schooley R , Austin B , MacCannell DR , Kingsmore SF , Lee W , Shah S , McDonald E , Yu AT , Zeller M , Fisch KM , Longhurst C , Maysent P , Pride D , Khosla PK , Laurent LC , Yeo GW , Andersen KG , Knight R . Nature 2022 609 (7925) 101-108
First detection of human pathogenic variant of Anaplasma phagocytophilum in field-collected Haemaphysalis longicornis, Pennsylvania, USA. Price KJ , Ayres BN , Maes SE , Witmier BJ , Chapman HA , Coder BL , Boyer CN , Eisen RJ , Nicholson WL . Zoonoses Public Health 2021 69 (2) 143-148
Division of the genus Chryseobacterium: Observation of discontinuities in amino acid identity values, a possible consequence of major extinction events, guides transfer of nine species to the genus Epilithonimonas , eleven species to the genus Kaistella , and three species to the genus Halpernia gen. nov., with description of Kaistella daneshvariae sp. nov. and Epilithonimonas vandammei sp. nov. derived from clinical specimens. Nicholson AC , Gulvik CA , Whitney AM , Humrighouse BW , Bell ME , Holmes B , Steigerwalt AG , Villarma A , Sheth M , Batra D , Rowe LA , Burroughs M , Pryor JC , Bernardet JF , Hugo C , Kämpfer P , Newman JD , McQuiston JR . Int J Syst Evol Microbiol 2020 70 (8) 4432-4450
Draft Genome Sequence of Kroppenstedtia sanguinis X0209 T , a Clinical Isolate Recovered from Human Blood. Arthur RA , Nicholson AC , Humrighouse BW , McQuiston JR , Lasker BA . Microbiol Resour Announc 2019 8 (24)
In Silico Identification of Three Types of Integrative and Conjugative Elements in Elizabethkingia anophelis Strains Isolated from around the World. Xu J , Pei D , Nicholson A , Lan Y , Xia Q . mSphere 2019 4 (2)
A real-time multiplex PCR assay for detection of Elizabethkingia species, and differentiating between E. anophelis and E. meningoseptica . Kelly AJ , Karpathy SE , Gulvik CA , Ivey ML , Whitney AM , Bell ME , Nicholson AC , Humrighouse BH , McQuiston JR . J Clin Microbiol 2019 57 (4)
The draft genomes of Elizabethkingia anophelis of equine origin are genetically similar to three isolates from human clinical specimens. Johnson WL , Ramachandran A , Torres NJ , Nicholson AC , Whitney AM , Bell M , Villarma A , Humrighouse BW , Sheth M , Dowd SE , McQuiston JR , Gustafson JE . PLoS One 2018 13 (7) e0200731
Prevalence of Rickettsia Species (Rickettsiales: Rickettsiaceae) in Dermacentor variabilis Ticks (Acari: Ixodidae) in North Carolina. Kakumanu ML , Ponnusamy L , Sutton H , Meshnick SR , Nicholson WL , Apperson CS . J Med Entomol 2018 55 (5) 1284-1291
Complete Circularized Genome Sequences of Four Strains of Elizabethkingia anophelis, Including Two Novel Strains Isolated from Wild-Caught Anopheles sinensis. Pei D , Nicholson AC , Jiang J , Chen H , Whitney AM , Villarma A , Bell M , Humrighouse B , Rowe LA , Sheth M , Batra D , Juieng P , Loparev VN , McQuiston JR , Lan Y , Ma Y , Xu J . Genome Announc 2017 5 (47)
Twelve Complete Reference Genomes of Clinical Isolates in the Capnocytophaga Genus. Villarma A , Gulvik CA , Rowe LA , Sheth M , Juieng P , Nicholson AC , Loparev VN , McQuiston JR . Genome Announc 2017 5 (44)
Revisiting the taxonomy of the genus Elizabethkingia using whole-genome sequencing, optical mapping, and MALDI-TOF, along with proposal of three novel Elizabethkingia species: Elizabethkingia bruuniana sp. nov., Elizabethkingia ursingii sp. nov., and Elizabethkingia occulta sp. nov. Nicholson AC , Gulvik CA , Whitney AM , Humrighouse BW , Graziano J , Emery B , Bell M , Loparev V , Juieng P , Gartin J , Bizet C , Clermont D , Criscuolo A , Brisse S , McQuiston JR . Antonie Van Leeuwenhoek 2017 111 (1) 55-72
Evolutionary dynamics and genomic features of the Elizabethkingia anophelis 2015 to 2016 Wisconsin outbreak strain. Perrin A , Larsonneur E , Nicholson AC , Edwards DJ , Gundlach KM , Whitney AM , Gulvik CA , Bell ME , Rendueles O , Cury J , Hugon P , Clermont D , Enouf V , Loparev V , Juieng P , Monson T , Warshauer D , Elbadawi LI , Walters MS , Crist MB , Noble-Wang J , Borlaug G , Rocha EPC , Criscuolo A , Touchon M , Davis JP , Holt KE , McQuiston JR , Brisse S . Nat Commun 2017 8 15483
Isolation and characterization of a unique strain of Rickettsia parkeri associated with the hard tick Dermacentor parumapertus Neumann in the western United States. Paddock CD , Allerdice ME , Karpathy SE , Nicholson WL , Levin ML , Smith TC , Becker T , Delph RJ , Knight RN , Ritter JM , Sanders JH , Goddard J . Appl Environ Microbiol 2017 83 (9)
Notes from the Field: Investigation of Elizabethkingia anophelis Cluster - Illinois, 2014-2016. Navon L , Clegg WJ , Morgan J , Austin C , McQuiston JR , Blaney DD , Walters MS , Moulton-Meissner H , Nicholson A . MMWR Morb Mortal Wkly Rep 2016 65 (48) 1380-1381
Complete Genome Sequences of Four Strains from the 2015-2016 Elizabethkingia anophelis Outbreak. Nicholson AC , Whitney AM , Emery BD , Bell ME , Gartin JT , Humrighouse BW , Loparev VN , Batra D , Sheth M , Rowe LA , Juieng P , Knipe K , Gulvik C , McQuiston JR . Genome Announc 2016 4 (3)
Using Multiplex Molecular Testing to Determine the Etiology of Acute Gastroenteritis in Children. Nicholson MR , Van Horn GT , Tang YW , Vinje J , Payne DC , Edwards KM , Chappell JD . J Pediatr 2016 176 50-56 e2
Draft Genome Sequences of Strains Representing Each of the Elizabethkingia Genomospecies Previously Determined by DNA-DNA Hybridization. Nicholson AC , Humrighouse BW , Graziano JC , Emery B , McQuiston JR . Genome Announc 2016 4 (2)
Development and Validation of an Improved PCR Method Using the 23S-5S Intergenic Spacer for Detection of Rickettsiae in Dermacentor variabilis Ticks and Tissue Samples from Humans and Laboratory Animals. Kakumanu ML , Ponnusamy L , Sutton HT , Meshnick SR , Nicholson WL , Apperson CS . J Clin Microbiol 2016 54 (4) 972-9
Genome Sequences of Oblitimonas alkaliphila gen. nov. sp. nov. (Proposed), a Novel Bacterium of the Pseudomonadaceae Family. Lauer AC , Nicholson AC , Humrighouse BW , Emery B , Drobish A , Juieng P , Loparev V , McQuiston JR . Genome Announc 2015 3 (6)
Complete Genome Sequences for Two Strains of a Novel Fastidious, Partially Acid-Fast, Gram-Positive Corynebacterineae Bacterium, Derived from Human Clinical Samples. Nicholson AC , Bell M , Humrighouse BW , McQuiston JR . Genome Announc 2015 3 (6)