CDC-Authored Genomics and Precision Health Publications Database

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Last data update: Nov 04, 2024. (Total: 6390 publications)

All Cancer Diabetes Economic Equity Environmental FHH HLBS ID Implementation ND PGx PI Rare RCH dataset

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Records 1-30 (of 57 Records)

Query Trace: Mathew S[original query]
HIV DNA levels in persons who acquired HIV in the setting of long-acting cabotegravir for HIV prevention: Analysis of cases from HPTN 083 and 084 Fogel JM , Persaud D , Piwowar-Manning E , Richardson P , Szewczyk J , Marzinke MA , Wang Z , Guo X , McCauley M , Farrior J , Tran HV , Ungsedhapand C , Mathew CA , Mpendo J , Rinehart AR , Rooney JF , Cohen MS , Hanscom B , Grinsztejn B , Hosseinipour MC , Delany-Moretlwe S , Landovitz RJ , Eshleman SH . AIDS Res Hum Retroviruses 2024
Novel NSP1 genotype characterised in an African camel G8P[11] rotavirus strain. Jere KC , Esona MD , Ali YH , Peenze I , Roy S , Bowen MD , Saeed IK , Khalafalla AI , Nyaga MM , Mphahlele J , Steele D , Seheri ML . Infect Genet Evol 2014 21 58-66
Genomic surveillance for SARS-CoV-2 variants: Circulation of Omicron lineages - United States, January 2022-May 2023 Ma KC , Shirk P , Lambrou AS , Hassell N , Zheng XY , Payne AB , Ali AR , Batra D , Caravas J , Chau R , Cook PW , Howard D , Kovacs NA , Lacek KA , Lee JS , MacCannell DR , Malapati L , Mathew S , Mittal N , Nagilla RR , Parikh R , Paul P , Rambo-Martin BL , Shepard SS , Sheth M , Wentworth DE , Winn A , Hall AJ , Silk BJ , Thornburg N , Kondor R , Scobie HM , Paden CR . MMWR Morb Mortal Wkly Rep 2023 72 (24) 651-656
Effectiveness of monovalent rotavirus vaccine against hospitalizations due to all rotavirus and equine-like G3P[8] genotypes in Haiti 2014-2019. Burnett E , Juin S , Esona MD , Desormeaux AM , Aliabadi N , Pierre M , Andre-Alboth J , Leshem E , Etheart MD , Patel R , Dely P , Fitter D , Jean-Denis G , Kalou M , Katz MA , Bowen MD , Grant-Greene Y , Boncy J , Parashar UD , Joseph GA , Tate JE . Vaccine 2021 39 (32) 4458-4462
Use of partial N-gene sequences as a tool to monitor progress on rabies control and elimination efforts in Ethiopia. Binkley L , Deressa A , Shi M , Jara M , Escobar LE , Mauldin MR , Matheny A , O'Quin J , Pieracci EG , Kling C , Hartloge C , Yimer G , Abate E , Gebreyes W , Reynolds M , Belay E , Shiferaw M , Nakazawa Y , Velasco-Villa A . Acta Trop 2021 221 106022
Whole gene analysis of a genotype G29P[6] human rotavirus strain identified in Central African Republic. Banga-Mingo V , Esona MD , Betrapally NS , Gautam R , Jaimes J , Katz E , Waku-Kouomou D , Bowen MD , Gouandjika-Vasilache I . BMC Res Notes 2021 14 (1) 218
Rotavirus Genotype Trends and Gastrointestinal Pathogen Detection in the United States, 2014-16: Results from the New Vaccine Surveillance Network. Esona MD , Ward ML , Wikswo ME , Rustempasic SM , Gautam R , Perkins C , Selvarangan R , Harrison CJ , Boom JA , Englund JA , Klein EJ , Staat MA , McNeal MM , Halasa N , Chappell J , Weinberg GA , Payne DC , Parashar UD , Bowen MD . J Infect Dis 2021 224 (9) 1539-1549
Western Kenyan Anopheles gambiae showing intense permethrin resistance harbour distinct microbiota. Omoke D , Kipsum M , Otieno S , Esalimba E , Sheth M , Lenhart A , Njeru EM , Ochomo E , Dada N . Malar J 2021 20 (1) 77
Portable Rabies Virus Sequencing in Canine Rabies Endemic Countries Using the Oxford Nanopore MinION. Gigante CM , Yale G , Condori RE , Costa NC , Long NV , Minh PQ , Chuong VD , Tho ND , Thanh NT , Thin NX , Hanh NTH , Wambura G , Ade F , Mito O , Chuchu V , Muturi M , Mwatondo A , Hampson K , Thumbi SM , Thomae BG , de Paz VH , Meneses S , Munyua P , Moran D , Cadena L , Gibson A , Wallace RM , Pieracci EG , Li Y . Viruses 2020 12 (11)
Molecular characteristics of rotavirus genotypes circulating in the south of Benin, 2016-2018. Agbla JM , Esona MD , Agbankpe AJ , Capo-Chichi A , Gautam R , Dougnon TV , Razack O , Bowen MD , Bankole HS . BMC Res Notes 2020 13 (1) 485
The Longitudinal Epidemiologic Assessment of Diabetes Risk (LEADR): Unique 1.4 M patient Electronic Health Record cohort. Fishbein HA , Birch RJ , Mathew SM , Sawyer HL , Pulver G , Poling J , Kaelber D , Mardon R , Johnson MC , Pace W , Umbel KD , Zhang X , Siegel KR , Imperatore G , Shrestha S , Proia K , Cheng Y , McKeever Bullard K , Gregg EW , Rolka D , Pavkov ME . Healthc (Amst) 2020 8 (4) 100458
Whole genome and in-silico analyses of G1P[8] rotavirus strains from pre- and post-vaccination periods in Rwanda. Rasebotsa S , Mwangi PN , Mogotsi MT , Sabiu S , Magagula NB , Rakau K , Uwimana J , Mutesa L , Muganga N , Murenzi D , Tuyisenge L , Jaimes J , Esona MD , Bowen MD , Mphahlele MJ , Seheri ML , Mwenda JM , Nyaga MM . Sci Rep 2020 10 (1) 13460
Outbreak of diarrhoea in piglets caused by novel rotavirus genotype G4P[49] in north-western district of Bangladesh, February 2014. Sarkar S , Dioh Esona M , Gautam R , Castro CJ , Ng TFF , Haque W , Khan SU , Hossain ME , Rahman MZ , Gurley ES , Kennedy ED , Bowen MD , Parashar UD , Rahman M . Transbound Emerg Dis 2019 67 (1) 442-449
Distribution of rotavirus genotypes in the post-vaccine introduction era in Ashaiman, Greater Accra Region, Ghana, 2014-2016. Letsa V , Damanka S , Dennis F , Lartey B , Armah GE , Betrapally N , Gautam R , Esona MD , Bowen MD , Quaye O . J Med Virol 2019 91 (11) 2025-2028
Whole-gene analysis of inter-genogroup reassortant rotaviruses from the Dominican Republic: Emergence of equine-like G3 strains and evidence of their reassortment with locally-circulating strains. Katz EM , Esona MD , Betrapally NS , De La Cruz De Leon LA , Neira YR , Rey GJ , Bowen MD . Virology 2019 534 114-131
Characterization of Novel Reoviruses [Wad Medani virus (Orbivirus) and Kundal (Coltivirus)] collected from Hyalomma antolicum ticks in India during CCHF surveillance. Yadav PD , Whitmer SLM , Sarkale P , Ng TFF , Goldsmith CS , Nyayanit DA , Esona MD , Shrivastava-Ranjan P , Lakra R , Pardeshi P , Majumdar TD , Francis A , Klena JD , Nichol ST , Stroher U , Mourya D . J Virol 2019 93 (13)
Multiple introductions and antigenic mismatch with vaccines may contribute to increased predominance of G12P[8] rotaviruses in the United States. Ogden KM , Tan Y , Akopov A , Stewart LS , McHenry R , Fonnesbeck CJ , Piya B , Carter MH , Fedorova NB , Halpin RA , Shilts MH , Edwards KM , Payne DC , Esona MD , Mijatovic-Rustempasic S , Chappell JD , Patton JT , Halasa NB , Das SR . J Virol 2018 93 (1)
Characterisation of a rare, reassortant human G10P[14] rotavirus strain detected in Honduras. Quaye O , Roy S , Rungsrisuriyachai K , Esona MD , Xu Z , Tam KI , Banegas DJC , Rey-Benito G , Bowen MD . Mem Inst Oswaldo Cruz 2018 113 (1) 9-16
Emergence of G12 and G9 rotavirus genotypes in the Central African Republic, January 2014 to February 2016. Moure UAE , Banga-Mingo V , Gody JC , Mwenda JM , Fandema J , Waku-Kouomou D , Manengu C , Koyazegbe TD , Esona MD , Bowen MD , Gouandijka-Vasilache I . BMC Res Notes 2018 11 (1) 5
Molecular characterization of a human G20P[28] rotavirus a strain with multiple genes related to bat rotaviruses. Esona MD , Roy S , Rungsrisuriyachai K , Gautam R , Hermelijn S , Rey-Benito G , Bowen MD . Infect Genet Evol 2017 57 166-170
Pre-vaccine circulating group a rotavirus strains in under 5 years children with acute diarrhea during 1999-2013 in Cameroon. Ndombo PK , Ndze VN , Fokunang C , Ashukem TN , Boula A , Kinkela MN , Ndode CE , Seheri ML , Bowen MD , Waku-Kouomou D , Esona MD . Virology (Lond) 2017 1 (4)
Cost projections for implementation of safety interventions to prevent transfusion-transmitted Zika virus infection in the United States. Ellingson KD , Sapiano MRP , Haass KA , Savinkina AA , Baker ML , Henry RA , Berger JJ , Kuehnert MJ , Basavaraju SV . Transfusion 2017 57 Suppl 2 1625-1633
Characterization of a triple-recombinant, reassortant rotavirus strain from the Dominican Republic. Esona MD , Roy S , Rungsrisuriyachai K , Sanchez J , Vasquez L , Gomez V , Rios LA , Bowen MD , Vazquez M . J Gen Virol 2017 98 (2) 134-142
Complications of haemophilia in babies (first two years of life): a report from the Centers for Disease Control and Prevention Universal Data Collection System Kulkarni R , Presley RJ , Lusher JM , Shapiro AD , Gill JC , Manco-Johnson M , Koerper MA , Abshire TC , DiMichele D , Hoots WK , Mathew P , Nugent DJ , Geraghty S , Evatt BL , Soucie JM . Haemophilia 2016 23 (2) 207-214
Sensitive and specific nested PCR assay for detection of rotavirus A in samples with a low viral load. Mijatovic-Rustempasic S , Esona MD , Williams AL , Bowen MD . J Virol Methods 2016 236 41-46
Rotavirus Strain Trends During the Postlicensure Vaccine Era: United States, 2008-2013. Bowen MD , Mijatovic-Rustempasic S , Esona MD , Teel EN , Gautam R , Sturgeon M , Azimi PH , Baker CJ , Bernstein DI , Boom JA , Chappell J , Donauer S , Edwards KM , Englund JA , Halasa NB , Harrison CJ , Johnston SH , Klein EJ , McNeal MM , Moffatt ME , Rench MA , Sahni LC , Selvarangan R , Staat MA , Szilagyi PG , Weinberg GA , Wikswo ME , Parashar UD , Payne DC . J Infect Dis 2016 214 (5) 732-8
Effectiveness of Monovalent Rotavirus Vaccine After Programmatic Implementation in Botswana: A Multisite Prospective Case-Control Study. Gastanaduy PA , Steenhoff AP , Mokomane M , Esona MD , Bowen MD , Jibril H , Pernica JM , Mazhani L , Smieja M , Tate JE , Parashar UD , Goldfarb DM . Clin Infect Dis 2016 62 S161-S167
One-step multiplex real-time RT-PCR assay for detecting and genotyping wild-type group A rotavirus strains and vaccine strains (Rotarix® and RotaTeq®) in stool samples. Gautam R , Mijatovic-Rustempasic S , Esona MD , Tam KI , Quaye O , Bowen MD . PeerJ 2016 4 e1560
G2P[4]-RotaTeq Reassortant Rotavirus in Vaccinated Child, United States. Roy S , Rungsrisuriyachai K , Esona MD , Boom JA , Sahni LC , Rench MA , Baker CJ , Wikswo ME , Payne DC , Parashar UD , Bowen MD . Emerg Infect Dis 2015 21 (11) 2103-4
Multiplexed one-step RT-PCR VP7 and VP4 genotyping assays for rotaviruses using updated primers. Esona MD , Gautam R , Tam KI , Williams A , Mijatovic-Rustempasic S , Bowen MD . J Virol Methods 2015 223 96-104