CDC-Authored Genomics and Precision Health Publications Database

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Last data update: Nov 04, 2024. (Total: 6390 publications)

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Records 1-28 (of 28 Records)

Query Trace: Lutgring J[original query]
Sentinel Surveillance reveals phylogenetic diversity and detection of linear plasmids harboring vanA and optrA among enterococci collected in the United States Kent AG , Spicer LM , Campbell D , Breaker E , McAllister GA , Ewing TO , Longo C , Balbuena R , Burroughs M , Burgin A , Padilla J , Johnson JK , Halpin AL , McKay SL , Rasheed JK , Elkins CA , Karlsson M , Lutgring JD , Gargis AS . Antimicrob Agents Chemother 2024 e0059124
Genomic epidemiology of extrapulmonary nontuberculous mycobacteria isolates at emerging infections program sites - United States, 2019-2020 Masters TL , Toney NC , Ewing TO , McAllister G , Mathis MH , Grigg C , Magill SS , Jackson KA , Byram R , See I , Salfinger M , Barter D , Johnston H , Lynfield R , Vagnone PS , Tourdot L , Anderson BJ , Dumyati G , Pierce R , Lutgring JD , Gargis A , McKay S . J Infect Dis 2024
Complete genome sequences of Clostridioides difficile surveillance isolates representing the top 10 ribotypes from the Emerging Infections Program, United States, 2016 Adamczyk M , Vlachos N , Breaker E , Orazi G , Paulick AL , Rowe LA , McAllister G , Machado MJ , Korhonen L , Guh AY , Rasheed JK , Karlsson M , McKay SL , Lutgring JD , Gargis AS . Microbiol Resour Announc 2024 e0112823
Carbapenem-resistant Acinetobacter baumannii complex in the United States - an epidemiological and molecular description of isolates collected through the Emerging Infections Program, 2019 Bulens SN , Campbell D , McKay SL , Vlachos N , Burgin A , Burroughs M , Padila J , Grass JE , Jacob JT , Smith G , Muleta DB , Maloney M , Macierowski B , Wilson LE , Vaeth E , Lynfield R , O'Malley S , Snippes Vagnone PM , Dale J , Janelle SJ , Czaja CA , Johnson H , Phipps EC , Flores KG , Dumyati G , Tsay R , Beldavs ZG , Maureen Cassidy P , Hall A , Walters MS , Guh AY , Magill SS , Lutgring JD . Am J Infect Control 2024
Descriptive analysis of targeted carbapenemase genes and antibiotic susceptibility profiles among carbapenem-resistant Acinetobacter baumannii tested in the Antimicrobial Resistance Laboratory Network-United States, 2017-2020 Sabour S , Bantle K , Bhatnagar A , Huang JY , Biggs A , Bodnar J , Dale JL , Gleason R , Klein L , Lasure M , Lee R , Nazarian E , Schneider E , Smith L , Snippes Vagnone P , Therrien M , Tran M , Valley A , Wang C , Young EL , Lutgring JD , Brown AC . Microbiol Spectr 2024 e0282823
Comparison of carbapenem-susceptible and carbapenem-resistant Enterobacterales at nine sites in the USA, 2013-2016: a resource for antimicrobial resistance investigators Lutgring JD , Kent AG , Bowers JR , Jasso-Selles DE , Albrecht V , Stevens VA , Pfeiffer A , Barnes R , Engelthaler DM , Johnson JK , Gargis AS , Rasheed JK , Limbago BM , Elkins CA , Karlsson M , Halpin AL . Microb Genom 2023 9 (11)
Reference Susceptibility Testing and Genomic Surveillance of Clostridioides difficile, United States, 2012-17. Gargis AS , Karlsson M , Paulick AL , Anderson KF , Adamczyk M , Vlachos N , Kent AG , McAllister GA , McKay SL , Halpin AL , Albrecht V , Campbell D , Korhonen L , Elkins CA , Rasheed JK , Guh AY , McDonald LC , Lutgring JD . Clin Infect Dis 2022 76 (5) 890-896
Whole-Genome Sequencing Reveals Diversity of Carbapenem-Resistant Pseudomonas aeruginosa Collected through CDC's Emerging Infections Program, United States, 2016-2018. Stanton RA , Campbell D , McAllister GA , Breaker E , Adamczyk M , Daniels JB , Lutgring JD , Karlsson M , Schutz K , Jacob JT , Wilson LE , Vaeth E , Li L , Lynfield R , Snippes Vagnone PM , Phipps EC , Hancock EB , Dumyati G , Tsay R , Cassidy PM , Mounsey J , Grass JE , Bulens SN , Walters MS , Halpin AL . Antimicrob Agents Chemother 2022 66 (9) e0049622
Carbapenem-Resistant enterobacterales in individuals with and without health care risk factors -Emerging infections program, United States, 2012-2015. Bulens SN , Reses HE , Ansari UA , Grass JE , Carmon C , Albrecht V , Lawsin A , McAllister G , Daniels J , Lee YK , Yi S , See I , Jacob JT , Bower CW , Wilson L , Vaeth E , Lynfield R , Vagnone PS , Shaw KM , Dumyati G , Tsay R , Phipps EC , Bamberg W , Janelle SJ , Beldavs ZG , Cassidy PM , Kainer M , Muleta D , Mounsey JT , Laufer-Halpin A , Karlsson M , Lutgring JD , Walters MS . Am J Infect Control 2022 51 (1) 70-77
Clinical and Genomic Epidemiology of mcr-9-Carrying Carbapenem-Resistant Enterobacterales Isolates in Metropolitan Atlanta, 2012 to 2017. Babiker A , Bower C , Lutgring JD , Petit RA3rd , Howard-Anderson J , Ansari U , McAllister G , Adamczyk M , Breaker E , Satola SW , Jacob JT , Woodworth MH . Microbiol Spectr 2022 10 (4) e0252221
Molecular Epidemiology of Carbapenem-Resistant Acinetobacter baumannii in the United States, 2013-2017. McKay SL , Vlachos N , Daniels JB , Albrecht VS , Stevens VA , Rasheed JK , Johnson JK , Lutgring JD , Sjölund-Karlsson M , Halpin AL . Microb Drug Resist 2022 28 (6) 645-653
Sentinel Surveillance Reveals Emerging Daptomycin-Resistant ST736 Enterococcus faecium and Multiple Mechanisms of Linezolid Resistance in Enterococci in the United States. Gargis AS , Spicer LM , Kent AG , Zhu W , Campbell D , McAllister G , Ewing TO , Albrecht V , Stevens VA , Sheth M , Padilla J , Batra D , Johnson JK , Halpin AL , Rasheed JK , Elkins CA , Karlsson M , Lutgring JD . Front Microbiol 2021 12 807398
Epidemiology of extended-spectrum β-lactamase-producing Enterobacterales in five US sites participating in the Emerging Infections Program, 2017. Duffy N , Karlsson M , Reses HE , Campbell D , Daniels J , Stanton RA , Janelle SJ , Schutz K , Bamberg W , Rebolledo PA , Bower C , Blakney R , Jacob JT , Phipps EC , Flores KG , Dumyati G , Kopin H , Tsay R , Kainer MA , Muleta D , Byrd-Warner B , Grass JE , Lutgring JD , Rasheed JK , Elkins CA , Magill SS , See I . Infect Control Hosp Epidemiol 2022 43 (11) 1-9
Molecular Characterization of Carbapenem-Resistant Enterobacterales Collected in the United States. Karlsson M , Lutgring JD , Ansari U , Lawsin A , Albrecht V , McAllister G , Daniels J , Lonsway D , McKay S , Beldavs Z , Bower C , Dumyati G , Gross A , Jacob J , Janelle S , Kainer MA , Lynfield R , Phipps EC , Schutz K , Wilson L , Witwer ML , Bulens SN , Walters MS , Duffy N , Kallen AJ , Elkins CA , Rasheed JK . Microb Drug Resist 2022 28 (4) 389-397
Distinctive Features of Ertapenem-Mono-Resistant Carbapenem-Resistant Enterobacterales in the United States: A Cohort Study. Adelman MW , Bower CW , Grass JE , Ansari UA , Soda EA , See I , Lutgring JD , Jacob JT . Open Forum Infect Dis 2022 9 (1) ofab643
Detection and Characterization of Targeted Carbapenem-Resistant Healthcare-Associated Threats: Findings from The Antibiotic Resistance Laboratory Network, 2017-2019. Sabour S , Huang JY , Bhatnagar A , Gilbert SE , Karlsson M , Lonsway D , Lutgring JD , Rasheed JK , Halpin AL , Stanton RA , Gumbis S , Elkins CA , Brown AC . Antimicrob Agents Chemother 2021 65 (12) Aac0110521
Evaluating the Presence of Replication-Competent SARS-CoV-2 from Nursing Home Residents with Persistently Positive RT-PCR Results. Lutgring JD , Tobolowsky FA , Hatfield KM , Lehnertz NB , Sullivan MM , Martin KG , Keaton A , Sexton DJ , Tamin A , Harcourt JL , Thornburg NJ , Reddy SC , Jernigan JA . Clin Infect Dis 2021 74 (3) 525-528
Aztreonam-Avibactam Susceptibility Testing Program for Metallo-Beta-Lactamase-Producing Enterobacterales in the Antibiotic Resistance Laboratory Network, March 2019 to December 2020. Bhatnagar A , Boyd S , Sabour S , Bodnar J , Nazarian E , Peinovich N , Wagner C , Craft B , Vagnone PS , Simpson J , Stone VN , Therrien M , Bateman A , Lower D , Huang JY , Gumbis S , Lonsway D , Lutgring JD , Karlsson M , Brown AC . Antimicrob Agents Chemother 2021 65 (8) Aac0048621
Detection of CTX-M-27 β-lactamase genes on two distinct plasmid types in ST38 Escherichia coli from three US states. Cameron A , Mangat R , Taffner S , Wang J , Dumyati G , Stanton RA , Daniels JB , Campbell D , Lutgring JD , Pecora ND . Antimicrob Agents Chemother 2021 65 (7) e0082521
Antimicrobial Susceptibility Profiles to Predict the Presence of Carbapenemase Genes among Carbapenem-Resistant Vallabhaneni S , Huang JY , Grass JE , Bhatnagar A , Sabour S , Lutgring JD , Campbell D , Karlsson M , Kallen AJ , Nazarian E , Snavely EA , Morris S , Wang C , Lee R , Koag M , Lewis R , Garcia B , Brown AC , Walters MS . J Clin Microbiol 2021 59 (6)
Characterization of Clostridioides difficile Isolates Available through the CDC & FDA Antibiotic Resistance Isolate Bank. Paulick A , Adamczyk M , Anderson K , Vlachos N , Machado MJ , McAllister G , Korhonen L , Guh AY , Halpin AL , Rasheed JK , Karlsson M , Lutgring JD , Gargis AS . Microbiol Resour Announc 2021 10 (1)
Assessing the in vitro impact of ceftazidime on aztreonam/avibactam susceptibility testing for highly resistant MBL-producing Enterobacterales. Bhatnagar A , Ransom EM , Machado MJ , Boyd S , Reese N , Anderson K , Lonsway D , Elkins CA , Rasheed JK , Patel JB , Karlsson M , Brown AC , Lutgring JD . J Antimicrob Chemother 2020 76 (4) 979-983
Multiple importations and transmission of colistin-resistant Klebsiella pneumoniae in a hospital in northern India. Mathur P , Khurana S , de Man TJB , Rastogi N , Katoch O , Veeraraghavan B , Neeravi AR , Venkatesan M , Kumar S , Sagar S , Gupta A , Aggarwal R , Soni KD , Malhotra R , Velayudhan A , Siromany V , Malpiedi P , Lutgring J , Laserson K , Gupta N , Srikantiah P , Sharma A . Infect Control Hosp Epidemiol 2019 40 (12) 1-7
A Laboratory Medicine Best Practices Systematic Review and Meta-analysis of Nucleic Acid Amplification Tests (NAATs) and Algorithms Including NAATs for the Diagnosis of Clostridioides ( Clostridium ) difficile in Adults. Kraft CS , Parrott JS , Cornish NE , Rubinstein ML , Weissfeld AS , McNult P , Nachamkin I , Humphries RM , Kirn TJ , Dien Bard J , Lutgring JD , Gullett JC , Bittencourt CE , Benson S , Bobenchik AM , Sautter RL , Baselski V , Atlas MC , Marlowe EM , Miller NS , Fischer M , Richter SS , Gilligan P , Snyder JW . Clin Microbiol Rev 2019 32 (3)
Development and Validation of a Clinical Laboratory Improvement Amendments-Compliant Multiplex Real-Time PCR Assay for Detection of mcr Genes. Daniels JB , Campbell D , Boyd S , Ansari U , Lutgring J , Rasheed JK , Halpin AL , Sjolund-Karlsson M . Microb Drug Resist 2019 25 (7) 991-996
Evaluation of the MicroScan Colistin Well and Gradient Diffusion Strips for Colistin Susceptibility Testing in Enterobacteriaceae . Lutgring JD , Kim A , Campbell D , Karlsson M , Brown AC , Burd EM . J Clin Microbiol 2019 57 (5)
Phenotypic and Genotypic Characterization of Enterobacteriaceae Producing Oxacillinase-48-Like Carbapenemases, United States. Lutgring JD , Zhu W , de Man TJB , Avillan JJ , Anderson KF , Lonsway DR , Rowe LA , Batra D , Rasheed JK , Limbago BM . Emerg Infect Dis 2018 24 (4) 700-709
Genomic Analysis of a Pan-Resistant Isolate of Klebsiella pneumoniae , United States 2016. de Man TJB , Lutgring JD , Lonsway DR , Anderson KF , Kiehlbauch JA , Chen L , Walters MS , Sjolund-Karlsson M , Rasheed JK , Kallen A , Halpin AL . mBio 2018 9 (2)