CDC-Authored Genomics and Precision Health Publications Database
Last data update: Nov 28, 2023. (Total: 4484 publications since 2011)
| Query Trace: Loparev V[original query] |
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| The first complete genome of the simian malaria parasite Plasmodium brasilianum.
Bajic M , Ravishankar S , Sheth M , Rowe LA , Pacheco MA , Patel DS , Batra D , Loparev V , Olsen C , Escalante AA , Vannberg F , Udhayakumar V , Barnwell JW , Talundzic E . Sci Rep 2022 12 (1) 19802 |
| Draft Chromosome Sequences of a Clinical Isolate of the Free-Living Ameba Naegleria fowleri.
Ali IKM , Kelley A , Joseph SJ , Park S , Roy S , Jackson J , Cope JR , Rowe LA , Burroughs M , Sheth M , Batra D , Loparev V . Microbiol Resour Announc 2021 10 (15) |
| Conserved Patterns of Symmetric Inversion in the Genome Evolution of Bordetella Respiratory Pathogens.
Weigand MR , Peng Y , Batra D , Burroughs M , Davis JK , Knipe K , Loparev VN , Johnson T , Juieng P , Rowe LA , Sheth M , Tang K , Unoarumhi Y , Williams MM , Tondella ML . mSystems 2019 4 (6) |
| Draft Genome Sequences of Leishmania ( Leishmania ) amazonensis , Leishmania ( Leishmania ) mexicana , and Leishmania ( Leishmania ) aethiopica , Potential Etiological Agents of Diffuse Cutaneous Leishmaniasis.
Batra D , Lin W , Narayanan V , Rowe LA , Sheth M , Zheng Y , Loparev V , deAlmeida M . Microbiol Resour Announc 2019 8 (20) |
| First Draft Genome Sequence of Leishmania (Viannia) lainsoni Strain 216-34, Isolated from a Peruvian Clinical Case.
Lin W , Batra D , Narayanan V , Rowe LA , Sheth M , Zheng Y , Juieng P , Loparev V , deAlmeida M . Microbiol Resour Announc 2019 8 (6) |
| Draft Genome Sequence of French Guiana Leishmania ( Viannia ) guyanensis Strain 204-365, Assembled Using Long Reads.
Batra D , Lin W , Rowe LA , Sheth M , Zheng Y , Loparev V , deAlmeida M . Microbiol Resour Announc 2018 7 (23) |
| Genomic insights into multidrug-resistance, mating and virulence in Candida auris and related emerging species.
Munoz JF , Gade L , Chow NA , Loparev VN , Juieng P , Berkow EL , Farrer RA , Litvintseva AP , Cuomo CA . Nat Commun 2018 9 (1) 5346 |
| PacBio Genome Sequences of Escherichia coli Serotype O157:H7, Diffusely Adherent E. coli , and Salmonella enterica Strains, All Carrying Plasmids with an mcr-1 Resistance Gene.
Lindsey RL , Batra D , Smith P , Patel PN , Tagg KA , Garcia-Toledo L , Loparev VN , Juieng P , Sheth M , Joung YJ , Rowe LA . Microbiol Resour Announc 2018 7 (14) |
| High-Quality Whole-Genome Sequences for 77 Shiga Toxin-Producing Escherichia coli Strains Generated with PacBio Sequencing.
Patel PN , Lindsey RL , Garcia-Toledo L , Rowe LA , Batra D , Whitley SW , Drapeau D , Stoneburg D , Martin H , Juieng P , Loparev VN , Strockbine N . Genome Announc 2018 6 (19) |
| High-Quality Whole-Genome Sequences for 59 Historical Shigella Strains Generated with PacBio Sequencing.
Kim J , Lindsey RL , Garcia-Toledo L , Loparev VN , Rowe LA , Batra D , Juieng P , Stoneburg D , Martin H , Knipe K , Smith P , Strockbine N . Genome Announc 2018 6 (15) |
| Genome Sequence of a Multidrug-Resistant Candida haemulonii Isolate from a Patient with Chronic Leg Ulcers in Israel.
Chow NA , Gade L , Batra D , Rowe LA , Juieng P , Ben-Ami R , Loparev VN , Litvintseva AP . Genome Announc 2018 6 (15) |
| Genome Sequence of the Amphotericin B-Resistant Candida duobushaemulonii Strain B09383.
Chow NA , Gade L , Batra D , Rowe LA , Juieng P , Loparev VN , Litvintseva AP . Genome Announc 2018 6 (13) |
| Screening and genomic characterization of filamentous hemagglutinin-deficient Bordetella pertussis.
Weigand MR , Pawloski LC , Peng Y , Ju H , Burroughs M , Cassiday PK , Davis JK , DuVall M , Johnson T , Juieng P , Knipe K , Loparev VN , Mathis MH , Rowe LA , Sheth M , Williams MM , Tondella ML . Infect Immun 2018 86 (4) |
| High-Quality Complete and Draft Genome Sequences for Three Escherichia spp. and Three Shigella spp. Generated with Pacific Biosciences and Illumina Sequencing and Optical Mapping.
Schroeder MR , Juieng P , Batra D , Knipe K , Rowe LA , Sheth M , Smith P , Garcia-Toledo L , Loparev VN , Lindsey RL . Genome Announc 2018 6 (1) |
| Standardization and validation of real time PCR assays for the diagnosis of histoplasmosis using three molecular targets in an animal model.
Lopez LF , Munoz CO , Caceres DH , Tobon AM , Loparev V , Clay O , Chiller T , Litvintseva A , Gade L , Gonzalez A , Gomez BL . PLoS One 2017 12 (12) e0190311 |
| Complete Circularized Genome Sequences of Four Strains of Elizabethkingia anophelis, Including Two Novel Strains Isolated from Wild-Caught Anopheles sinensis.
Pei Dong, Nicholson Ainsley C, Jiang Jinjin, Chen Huiying, Whitney Anne M, Villarma Aaron, Bell Melissa, Humrighouse Ben, Rowe Lori A, Sheth Mili, Batra Dhwani, Juieng Phalasy, Loparev Vladimir N, McQuiston John R, Lan Yuhao, Ma Yajun, Xu Jiannong.Genome announcements 2017 Nov (47) . Genome announcements 2017 Nov (47) |
| Twelve Complete Reference Genomes of Clinical Isolates in the Capnocytophaga Genus.
Villarma Aaron, Gulvik Christopher A, Rowe Lori A, Sheth Mili, Juieng Phalasy, Nicholson Ainsley C, Loparev Vladimir N, McQuiston John R.Genome announcements 2017 Nov (44) . Genome announcements 2017 Nov (44) |
| Complete Genome Sequences of Bordetella pertussis Isolates with Novel Pertactin-Deficient Deletions.
Weigand Michael R, Peng Yanhui, Cassiday Pamela K, Loparev Vladimir N, Johnson Taccara, Juieng Phalasy, Nazarian Elizabeth J, Weening Keeley, Tondella M Lucia, Williams Margaret M.Genome announcements 2017 Sep (37) . Genome announcements 2017 Sep (37) |
| High-Quality Draft Genome Sequences for Four Drug-Resistant or Outbreak-Associated Shigella sonnei Strains Generated with PacBio Sequencing and Whole-Genome Maps.
Lindsey Rebecca L, Batra Dhwani, Rowe Lori, N Loparev Vladimir, Juieng Phalasy, Garcia-Toledo Lisley, Bicknese Amelia, Stripling Devon, Martin Haley, Chen Jessica, Strockbine Nancy, Trees Eija.Genome announcements 2017 Aug (35) . Genome announcements 2017 Aug (35) |
| Revisiting the taxonomy of the genus Elizabethkingia using whole-genome sequencing, optical mapping, and MALDI-TOF, along with proposal of three novel Elizabethkingia species: Elizabethkingia bruuniana sp. nov., Elizabethkingia ursingii sp. nov., and Elizabethkingia occulta sp. nov.
Nicholson Ainsley C, Gulvik Christopher A, Whitney Anne M, Humrighouse Ben W, Graziano James, Emery Brian, Bell Melissa, Loparev Vladimir, Juieng Phalasy, Gartin Jarrett, Bizet Chantal, Clermont Dominique, Criscuolo Alexis, Brisse Sylvain, McQuiston John R.Antonie van Leeuwenhoek 2017 Aug . Antonie van Leeuwenhoek 2017 Aug |
| Evolutionary dynamics and genomic features of the Elizabethkingia anophelis 2015 to 2016 Wisconsin outbreak strain.
Perrin Amandine, Larsonneur Elise, Nicholson Ainsley C, Edwards David J, Gundlach Kristin M, Whitney Anne M, Gulvik Christopher A, Bell Melissa E, Rendueles Olaya, Cury Jean, Hugon Perrine, Clermont Dominique, Enouf Vincent, Loparev Vladimir, Juieng Phalasy, Monson Timothy, Warshauer David, Elbadawi Lina I, Walters Maroya Spalding, Crist Matthew B, Noble-Wang Judith, Borlaug Gwen, Rocha Eduardo P C, Criscuolo Alexis, Touchon Marie, Davis Jeffrey P, Holt Kathryn E, McQuiston John R, Brisse Sylvain.Nature communications 2017 May 15483 . Nature communications 2017 May 15483 |
| Evaluation of TaqMan Array Card (TAC) for the Detection of Central Nervous System Infections in Kenya.
Onyango Clayton O, Loparev Vladimir, Lidechi Shirley, Bhullar Vinod, Schmid D Scott, Radford Kay, Lo Michael K, Rota Paul, Johnson Barbara W, Munoz Jorge, Oneko Martina, Burton Deron, Black Carolyn M, Neatherlin John, Montgomery Joel M, Fields Barry.Journal of clinical microbiology 2017 Apr . Journal of clinical microbiology 2017 Apr |
| High-Quality Genome Sequence of an Escherichia coli O157 Strain Carrying an mcr-1 Resistance Gene Isolated from a Patient in the United States.
Lindsey Rebecca L, Batra Dhwani, Rowe Lori, Loparev Vladimir N, Stripling Devon, Garcia-Toledo Lisley, Knipe Kristen, Juieng Phalasy, Sheth Mili, Martin Haley, Laufer Halpin Alison. Genome announcements 2017 Mar 5(11) . Genome announcements 2017 Mar (11) |
| First Full Draft Genome Sequence of Plasmodium brasilianum.
Talundzic Eldin, Ravishankar Shashidhar, Nayak Vishal, Patel Dhruviben S, Olsen Christian, Sheth Mili, Batra Dhwani, Loparev Vladimir, Vannberg Fredrik O, Udhayakumar Venkatachalam, Barnwell John W. Genome announcements 2017 Feb 5(6) . Genome announcements 2017 Feb (6) |
| The History of Bordetella pertussis Genome Evolution Includes Structural Rearrangement.
Weigand Michael R, Peng Yanhui, Loparev Vladimir, Batra Dhwani, Bowden Katherine E, Burroughs Mark, Cassiday Pamela K, Davis Jamie K, Johnson Taccara, Juieng Phalasy, Knipe Kristen, Mathis Marsenia H, Pruitt Andrea M, Rowe Lori, Sheth Mili, Tondella M Lucia, Williams Margaret M.Journal of bacteriology 2017 Feb . Journal of bacteriology 2017 Feb |
| Complete Genome Sequences of Four Bordetella pertussis Vaccine Reference Strains from Serum Institute of India.
Weigand Michael R, Peng Yanhui, Loparev Vladimir, Johnson Taccara, Juieng Phalasy, Gairola Sunil, Kumar Rakesh, Shaligram Umesh, Gowrishankar Ramnath, Moura Hercules, Rees Jon, Schieltz David M, Williamson Yulanda, Woolfitt Adrian, Barr John, Tondella M Lucia, Williams Margaret M.Genome announcements 2016 Dec (6) . Genome announcements 2016 Dec (6) |
| Complete Genome Sequences of Enterococcus rotai LMG 26678T and Enterococcus silesiacus LMG 23085T.
Lauer Ana C, Humrighouse Ben W, Loparev Vladimir, Shewmaker Patricia L, Whitney Anne M, McQuiston John R, McLaughlin Richard W.Genome announcements 2016 Dec (6) . Genome announcements 2016 Dec (6) |
| Complete Genome Sequences for Three Chromosomes of the Burkholderia stabilis Type Strain (ATCC BAA-67).
Bugrysheva Julia V, Cherney Blake, Sue David, Conley Andrew B, Rowe Lori A, Knipe Kristen M, Frace Michael A, Loparev Vladimir N, Avila Julie R, Anderson Kevin, Hodge David R, Pillai Segaran P, Weigel Linda M. Genome announcements 2016 Nov 4(6) . Genome announcements 2016 Nov 4(6) |
| Complete Genome Sequences of Four Different Bordetella sp. Isolates Causing Human Respiratory Infections.
Weigand Michael R, Peng Yanhui, Loparev Vladimir, Batra Dhwani, Bowden Katherine E, Cassiday Pamela K, Davis Jamie K, Johnson Taccara, Juieng Phalasy, Miner Christine E, Rowe Lori, Sheth Mili, Tondella M Lucia, Williams Margaret M.Genome announcements 2016 Oct (5) . Genome announcements 2016 Oct (5) |
| Complete Genome Sequences of Bordetella pertussis Vaccine Reference Strains 134 and 10536.
Weigand Michael R, Peng Yanhui, Loparev Vladimir, Batra Dhwani, Burroughs Mark, Johnson Taccara, Juieng Phalasy, Rowe Lori, Tondella M Lucia, Williams Margaret M. Genome announcements 2016 4(5) . Genome announcements 2016 4(5) |
- Page last reviewed:Oct 1, 2023
- Page last updated:Nov 28, 2023
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