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CDC-Authored Genomics and Precision Health Publications Database|Home|Public Health Genomics and Precision Health Knowledge Base (PHGKB)

CDC-Authored Genomics and Precision Health Publications Database


Last data update: Sep 30, 2024. (Total: 6327 publications)
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Records 1-30 (of 30 Records)
Query Trace: Lane C[original query]
Machine learning to attribute the source of Campylobacter infections in the United States: a retrospective analysis of national surveillance data
Pascoe B , Futcher G , Pensar J , Bayliss SC , Mourkas E , Calland JK , Hitchings MD , Joseph LA , Lane CG , Greenlee T , Arning N , Wilson DJ , Jolley KA , Corander J , Maiden MCJ , Parker CT , Cooper KK , Rose EB , Hiett K , Bruce BB , Sheppard SK .
J Infect 2024 106265 type
SARS-CoV-2 RNA and nucleocapsid antigen are blood biomarkers associated with severe disease outcomes that improve in response to remdesivir
Singh K , Rubenstein K , Callier V , Shaw-Saliba K , Rupert A , Dewar R , Laverdure S , Highbarger H , Lallemand P , Huang ML , Jerome KR , Sampoleo R , Mills MG , Greninger AL , Juneja K , Porter D , Benson CA , Dempsey W , El Sahly HM , Focht C , Jilg N , Paules CI , Rapaka RR , Uyeki TM , Lane HC , Beigel J , Dodd LE .
J Infect Dis 2024 type
Rapid identification of enteric bacteria from whole genome sequences using average nucleotide identity metrics
Lindsey RL , Gladney LM , Huang AD , Griswold T , Katz LS , Dinsmore BA , Im MS , Kucerova Z , Smith PA , Lane C , Carleton HA .
Front Microbiol 2023 14 1225207 type
Simultaneous targeted amplicon deep sequencing and library preparation for a time and cost-effective universal parasite diagnostic sequencing approach
Gondard M , Lane M , Barratt J , Talundzic E , Qvarnstrom Y .
Parasitol Res 2023 122 (12) 3243-3256 type
Multinational outbreak of Listeria monocytogenes infections linked to enoki mushrooms imported from The Republic of Korea 2016-2020
Pereira E , Conrad A , Tesfai A , Palacios A , Kandar R , Kearney A , Locas A , Jamieson F , Elliot E , Otto M , Kurdilla K , Tijerina M , Son I , Pettengill JB , Chen Y , Fox T , Lane C , Aguillon R , Huffman J , Sheau Fong Low M , Wise M , Edwards L , Bidol S , Blankenship HM , Rosen HE , Leclercq A , Lecuit M , Tourdjman M , Herber H , Singleton LS , Viazis S , Bazaco MC .
J Food Prot 2023 86 (7) 100101 type
Application of a universal parasite diagnostic test to biological specimens collected from animals.
Lane M , Kashani M , Barratt JL , Qvarnstrom Y , Yabsley MJ , Garrett KB , Bradbury RS .
Int J Parasitol Parasites Wildl 2023 20 20-30 type
Changes and Inequities in Adult Mental Health-Related Emergency Department Visits During the COVID-19 Pandemic in the US.
Anderson KN , Radhakrishnan L , Lane RI , Sheppard M , DeVies J , Azondekon R , Smith AR , Bitsko RH , Hartnett KP , Lopes-Cardozo B , Leeb RT , vanSanten KL , Carey K , Crossen S , Dias TP , Wotiz S , Adjemian J , Rodgers L , Njai R , Thomas C .
JAMA Psychiatry 2022 79 (5) 475-485
Exome sequencing identifies variants in infants with sacral agenesis.
Pitsava G , Feldkamp ML , Pankratz N , Lane J , Kay DM , Conway KM , Hobbs C , Shaw GM , Reefhuis J , Jenkins MM , Almli LM , Moore C , Werler M , Browne ML , Cunniff C , Olshan AF , Pangilinan F , Brody LC , Sicko RJ , Finnell RH , Bamshad MJ , McGoldrick D , Nickerson DA , Mullikin JC , Romitti PA , Mills JL .
Birth Defects Res 2022 114 (7) 215-227
Sampling for SARS-CoV-2 Aerosols in Hospital Patient Rooms.
Lane MA , Walawender M , Webster AS , Brownsword EA , Ingersoll JM , Miller C , Waggoner J , Uyeki TM , Lindsley WG , Kraft CS .
Viruses 2021 13 (12) type
Assessing an Adaptation of the Universal Parasite Diagnostic Assay for Bloodborne Parasites in a US State Public Health Laboratory.
Clemons B , Barratt J , Lane M , Qvarnstrom Y , Teal AE , Zayas G , Madison-Antenucci S .
Am J Trop Med Hyg 2021 106 (2) 671-677 type
Ongoing Outbreak of Extensively Drug-Resistant Campylobacter jejuni Infections Associated With US Pet Store Puppies, 2016-2020.
Francois Watkins LK , Laughlin ME , Joseph LA , Chen JC , Nichols M , Basler C , Breazu R , Bennett C , Koski L , Montgomery MP , Hughes MJ , Robertson S , Lane CG , Singh AJ , Stanek D , Salehi E , Brandt E , McGillivary G , Mowery J , DeMent J , Aubert RD , Geissler AL , de Fijter S , Williams IT , Friedman CR .
JAMA Netw Open 2021 4 (9) e2125203
Exome sequencing of child-parent trios with bladder exstrophy: Findings in 26 children.
Pitsava G , Feldkamp ML , Pankratz N , Lane J , Kay DM , Conway KM , Shaw GM , Reefhuis J , Jenkins MM , Almli LM , Olshan AF , Pangilinan F , Brody LC , Sicko RJ , Hobbs CA , Bamshad M , McGoldrick D , Nickerson DA , Finnell RH , Mullikin J , Romitti PA , Mills JL .
Am J Med Genet A 2021 185 (10) 3028-3041
Bioaerosol sampling for SARS-CoV-2 in a referral center with critically ill COVID-19 patients March-May 2020.
Lane MA , Brownsword EA , Babiker A , Ingersoll JM , Waggoner J , Ayers M , Klopman M , Uyeki TM , Lindsley WG , Kraft CS .
Clin Infect Dis 2021 73 (7) e1790-e1794
Sensitive universal detection of blood parasites by selective pathogen-DNA enrichment and deep amplicon sequencing.
Flaherty BR , Barratt J , Lane M , Talundzic E , Bradbury RS .
Microbiome 2021 9 (1) 1 type
Parasitic Infection Surveillance in Mississippi Delta Children.
Bradbury RS , Arguello I , Lane M , Cooley G , Handali S , Dimitrova SD , Nascimento FS , Jameson S , Hellmann K , Tharp M , Byers P , Montgomery SP , Haynie L , Kirmse B , Pilotte N , Williams SA , Hobbs CV .
Am J Trop Med Hyg 2020 103 (3) 1150-1153
An open challenge to advance probabilistic forecasting for dengue epidemics.
Johansson MA , Apfeldorf KM , Dobson S , Devita J , Buczak AL , Baugher B , Moniz LJ , Bagley T , Babin SM , Guven E , Yamana TK , Shaman J , Moschou T , Lothian N , Lane A , Osborne G , Jiang G , Brooks LC , Farrow DC , Hyun S , Tibshirani RJ , Rosenfeld R , Lessler J , Reich NG , Cummings DAT , Lauer SA , Moore SM , Clapham HE , Lowe R , Bailey TC , Garcia-Diez M , Carvalho MS , Rodo X , Sardar T , Paul R , Ray EL , Sakrejda K , Brown AC , Meng X , Osoba O , Vardavas R , Manheim D , Moore M , Rao DM , Porco TC , Ackley S , Liu F , Worden L , Convertino M , Liu Y , Reddy A , Ortiz E , Rivero J , Brito H , Juarrero A , Johnson LR , Gramacy RB , Cohen JM , Mordecai EA , Murdock CC , Rohr JR , Ryan SJ , Stewart-Ibarra AM , Weikel DP , Jutla A , Khan R , Poultney M , Colwell RR , Rivera-Garcia B , Barker CM , Bell JE , Biggerstaff M , Swerdlow D , Mier YTeran-Romero L , Forshey BM , Trtanj J , Asher J , Clay M , Margolis HS , Hebbeler AM , George D , Chretien JP .
Proc Natl Acad Sci U S A 2019 116 (48) 24268-24274 type
A global genotyping survey of Strongyloides stercoralis and Strongyloides fuelleborni using deep amplicon sequencing.
Barratt JLN , Lane M , Talundzic E , Richins T , Robertson G , Formenti F , Pritt B , Verocai G , Nascimento de Souza J , Mato Soares N , Traub R , Buonfrate D , Bradbury RS .
PLoS Negl Trop Dis 2019 13 (9) e0007609 type
SeqSero2: rapid and improved Salmonella serotype determination using whole genome sequencing data.
Zhang S , Den-Bakker HC , Li S , Chen J , Dinsmore BA , Lane C , Lauer AC , Fields PI , Deng X .
Appl Environ Microbiol 2019 85 (23) type
Detection of classic and cryptic Strongyloides genotypesby deep amplicon sequencing: A preliminary survey of dog and human specimens collected from remote Australian communities.
Beknazarova M , Barratt JLN , Bradbury RS , Lane M , Whiley H , Ross K .
PLoS Negl Trop Dis 2019 13 (8) e0007241 type
New filovirus disease classification and nomenclature.
Kuhn JH , Adachi T , Adhikari NKJ , Arribas JR , Bah IE , Bausch DG , Bhadelia N , Borchert M , Brantsaeter AB , Brett-Major DM , Burgess TH , Chertow DS , Chute CG , Cieslak TJ , Colebunders R , Crozier I , Davey RT , de Clerck H , Delgado R , Evans L , Fallah M , Fischer WA 2nd , Fletcher TE , Fowler RA , Grunewald T , Hall A , Hewlett A , Hoepelman AIM , Houlihan CF , Ippolito G , Jacob ST , Jacobs M , Jakob R , Jacquerioz FA , Kaiser L , Kalil AC , Kamara RF , Kapetshi J , Klenk HD , Kobinger G , Kortepeter MG , Kraft CS , Kratz T , Bosa HSK , Lado M , Lamontagne F , Lane HC , Lobel L , Lutwama J , Lyon GM 3rd , Massaquoi MBF , Massaquoi TA , Mehta AK , Makuma VM , Murthy S , Musoke TS , Muyembe-Tamfum JJ , Nakyeyune P , Nanclares C , Nanyunja M , Nsio-Mbeta J , O'Dempsey T , Paweska JT , Peters CJ , Piot P , Rapp C , Renaud B , Ribner B , Sabeti PC , Schieffelin JS , Slenczka W , Soka MJ , Sprecher A , Strong J , Swanepoel R , Uyeki TM , van Herp M , Vetter P , Wohl DA , Wolf T , Wolz A , Wurie AH , Yoti Z .
Nat Rev Microbiol 2019 17 (5) 261-263 type
Restriction enzyme digestion of host DNA enhances universal detection of parasitic pathogens in blood via targeted amplicon deep sequencing.
Flaherty BR , Talundzic E , Barratt J , Kines KJ , Olsen C , Lane M , Sheth M , Bradbury RS .
Microbiome 2018 6 (1) 164 type
Greater Cognitive Deficits with Sleep-Disordered Breathing among Individuals with Genetic Susceptibility to Alzheimer's Disease: The Multi-Ethnic Study of Atherosclerosis.
Johnson DA , Lane J , Wang R , Reid M , Djonlagic I , Fitzpatrick AL , Rapp SR , Charles LE , O'Hara R , Saxena R , Redline S .
Ann Am Thorac Soc 2017 14 (11) 1697-1705
The Cancer Epidemiology Descriptive Cohort Database: A Tool to Support Population-Based Interdisciplinary Research.
Kennedy AE , Khoury MJ , Ioannidis JP , Brotzman M , Miller A , Lane C , Lai GY , Rogers SD , Harvey C , Elena JW , Seminara D .
Cancer Epidemiol Biomarkers Prev 2016 25 (10) 1392-1401 type
Borrelia bissettiae sp. nov. and Borrelia californiensis sp. nov. Prevail in Diverse Enzootic Transmission Cycles.
Margos G , Lane RS , Fedorova N , Koloczek J , Piesman J , Hojgaard A , Sing A , Fingerle V .
Int J Syst Evol Microbiol 2016 66 (3) 1447-1452
Characteristics and clinical management of a cluster of 3 patients with Ebola virus disease, including the first domestically acquired cases in the United States
Liddell AM , Davey RT Jr , Mehta AK , Varkey JB , Kraft CS , Tseggay GK , Badidi O , Faust AC , Brown KV , Suffredini AF , Barrett K , Wolcott MJ , Marconi VC , Lyon GM 3rd , Weinstein GL , Weinmeister K , Sutton S , Hazbun M , Albarino CG , Reed Z , Cannon D , Stroher U , Feldman M , Ribner BS , Lane HC , Fauci AS , Uyeki TM .
Ann Intern Med 2015 163 (2) 81-90
Emergency postexposure vaccination with vesicular stomatitis virus-vectored Ebola vaccine after needlestick.
Lai L , Davey R , Beck A , Xu Y , Suffredini AF , Palmore T , Kabbani S , Rogers S , Kobinger G , Alimonti J , Link CJ Jr , Rubinson L , Stroher U , Wolcott M , Dorman W , Uyeki TM , Feldmann H , Lane HC , Mulligan MJ .
JAMA 2015 313 (12) 1249-55
The association between serum biomarkers and disease outcome in influenza A(H1N1)pdm09 virus infection: results of two international observational cohort studies
Davey RT Jr , Lynfield R , Dwyer DE , Losso MH , Cozzi-Lepri A , Wentworth D , Lane HC , Dewar R , Rupert A , Metcalf JA , Pett SL , Uyeki TM , Bruguera JM , Angus B , Cummins N , Lundgren J , Neaton JD .
PLoS One 2013 8 (2) e57121
Inclusion of a CRF01_AE HIV envelope protein boost with a DNA/MVA prime-boost vaccine: impact on humoral and cellular immunogenicity and viral load reduction after SHIV-E challenge
Cox JH , Ferrari MG , Earl P , Lane JR , Jagodzinski LL , Polonis VR , Kuta EG , Boyer JD , Ratto-Kim S , Eller LA , Pham DT , Hart L , Montefiori D , Ferrari G , Parrish S , Weiner DB , Moss B , Kim JH , Birx D , Vancott TC .
Vaccine 2012 30 (10) 1830-40
The ABRF Proteomics Research Group studies: educational exercises for qualitative and quantitative proteomic analyses
Friedman DB , Andacht TM , Bunger MK , Chien AS , Hawke DH , Krijgsveld J , Lane WS , Lilley KS , Maccoss MJ , Moritz RL , Settlage RE , Sherman NE , Weintraub ST , Witkowska HE , Yates NA , Turck CW .
Proteomics 2011 11 (8) 1371-81
Population structure of the Lyme borreliosis spirochete Borrelia burgdorferi in the western black-legged tick (Ixodes pacificus) in northern California
Girard YA , Travinsky B , Schotthoefer A , Fedorova N , Eisen RJ , Eisen L , Barbour AG , Lane RS .
Appl Environ Microbiol 2009 75 (22) 7243-52
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