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CDC-Authored Genomics and Precision Health Publications Database|Home|PHGKB

CDC-Authored Genomics and Precision Health Publications Database


Last data update: Sep 18, 2023. (Total: 4409 publications since 2011)
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Records 1-30 (of 42 Records)
Query Trace: Kumar A[original query]
Annual (2023) taxonomic update of RNA-directed RNA polymerase-encoding negative-sense RNA viruses (realm Riboviria: kingdom Orthornavirae: phylum Negarnaviricota)
Kuhn JH , Abe J , Adkins S , Alkhovsky SV , Avi-upanc T , Aylln MA , Bahl J , Balkema-Buschmann A , Ballinger MJ , Kumar Baranwal V , Beer M , Bejerman N , Bergeron , Biedenkopf N , Blair CD , Blasdell KR , Blouin AG , Bradfute SB , Briese T , Brown PA , Buchholz UJ , Buchmeier MJ , Bukreyev A , Burt F , Bttner C , Calisher CH , Cao M , Casas I , Chandran K , Charrel RN , Kumar Chaturvedi K , Chooi KM , Crane A , Dal B E , Carlos de la Torre J , de Souza WM , de Swart RL , Debat H , Dheilly NM , Di Paola N , Di Serio F , Dietzgen RG , Digiaro M , Drexler JF , Duprex WP , Drrwald R , Easton AJ , Elbeaino T , Ergnay K , Feng G , Firth AE , Fooks AR , Formenty PBH , Freitas-Asta J , Gago-Zachert S , Laura Garca M , Garca-Sastre A , Garrison AR , Gaskin TR , Gong W , Gonzalez JJ , de Bellocq J , Griffiths A , Groschup MH , Gnther I , Gnther S , Hammond J , Hasegawa Y , Hayashi K , Hepojoki J , Higgins CM , Hong S , Horie M , Hughes HR , Hume AJ , Hyndman TH , Ikeda K , Jing D , Jonson GB , Junglen S , Klempa B , Klingstrm J , Kond H , Koonin EV , Krupovic M , Kubota K , Kurath G , Laenen L , Lambert AJ , L J , Li JM , Liu R , Lukashevich IS , MacDiarmid RM , Maes P , Marklewitz M , Marshall SH , Marzano SL , McCauley JW , Mirazimi A , Mhlberger E , Nabeshima T , Naidu R , Natsuaki T , Navarro B , Navarro JA , Neriya Y , Netesov SV , Neumann G , Nowotny N , Nunes MRT , Ochoa-Corona FM , Okada T , Palacios G , Palls V , Papa A , Paraskevopoulou S , Parrish CR , Pauvolid-Corra A , Pawska JT , Prez DR , Pfaff F , Plemper RK , Postler TS , Rabbidge LO , Radoshitzky SR , Ramos-Gonzlez PL , Rehanek M , Resende RO , Reyes CA , Rodrigues TCS , Romanowski V , Rubbenstroth D , Rubino L , Runstadler JA , Sabanadzovic S , Sadiq S , Salvato MS , Sasaya T , Schwemmle M , Sharpe SR , Shi M , Shimomoto Y , Kavi Sidharthan V , Sironi M , Smither S , Song JW , Spann KM , Spengler JR , Stenglein MD , Takada A , Takeyama S , Tatara A , Tesh RB , Thornburg NJ , Tian X , Tischler ND , Tomitaka Y , Tomonaga K , Tordo N , Tu C , Turina M , Tzanetakis IE , Maria Vaira A , van den Hoogen B , Vanmechelen B , Vasilakis N , Verbeek M , von Bargen S , Wada J , Wahl V , Walker PJ , Waltzek TB , Whitfield AE , Wolf YI , Xia H , Xylogianni E , Yanagisawa H , Yano K , Ye G , Yuan Z , Zerbini FM , Zhang G , Zhang S , Zhang YZ , Zhao L , kland AL .
J Gen Virol 2023 104 (8)
Editorial: Emerging SARS-CoV-2 variants: genomic variations, transmission, pathogenesis, clinical impact, and interventions, volume II
Yadav PD , Patil DY , Kumar S , Bergeron E , Rodriguez SE .
Front Med (Lausanne) 2023 10 1215309
Perceived Hospital Stress, Severe Acute Respiratory Syndrome Coronavirus 2 Activity, and Care Process Temporal Variance During the COVID-19 Pandemic.
Anesi GL , Andrews A , Bai HJ , Bhatraju PK , Brett-Major DM , Broadhurst MJ , Campbell ES , Cobb JP , Gonzalez M , Homami S , Hypes CD , Irwin A , Kratochvil CJ , Krolikowski K , Kumar VK , Landsittel DP , Lee RA , Liebler JM , Lutrick K , Marts LT , Mosier JM , Mukherjee V , Postelnicu R , Rodina V , Segal LN , Sevransky JE , Spainhour C , Srivastava A , Uyeki TM , Wurfel MM , Wyles D , Evans L .
Crit Care Med 2023 51 (4) 445-459 type
Editorial: Emerging SARS-CoV-2 variants: Genomic variations, transmission, pathogenesis, clinical impact and interventions
Yadav PD , Kumar S , Bergeron , Flora MS .
Front Med (Lausanne) 2023 10 1178696
Antiviral Approaches against Influenza Virus.
Kumari R , Sharma SD , Kumar A , Ende Z , Mishina M , Wang Y , Falls Z , Samudrala R , Pohl J , Knight PR , Sambhara S .
Clin Microbiol Rev 2023 e0004022
Angiopoietin-Like4 Is a Novel Marker of COVID-19 Severity.
Bhatraju PK , Morrell ED , Stanaway IB , Sathe NA , Srivastava A , Postelnicu R , Green R , Andrews A , Gonzalez M , Kratochvil CJ , Kumar VK , Hsiang TY , Gale M Jr , Anesi GL , Wyles D , Broadhurst MJ , Brett-Major D , Mukherjee V , Sevransky JE , Landsittel D , Hung C , Altemeier WA , Gharib SA , Uyeki TM , Cobb JP , Liebler JM , Crosslin DR , Jarvik GP , Segal LN , Evans L , Mikacenic C , Wurfel MM .
Crit Care Explor 2023 5 (1) e0827 type
Interpreting biomonitoring data: Introducing the international human biomonitoring (i-HBM) working group's health-based guidance value (HB2GV) dashboard.
Nakayama SF , St-Amand A , Pollock T , Apel P , Bamai YA , Barr DB , Bessems J , Calafat AM , Castao A , Covaci A , Duca RC , Faure S , Galea KS , Hays S , Hopf NB , Ito Y , Jeddi MZ , Kolossa-Gehring M , Kumar E , LaKind JS , Lpez ME , Louro H , Macey K , Makris KC , Melnyk L , Murawski A , Naiman J , Nassif J , Noisel N , Poddalgoda D , Quirs-Alcal L , Rafiee A , Rambaud L , Silva MJ , Ueyama J , Verner MA , Waras MN , Werry K .
Int J Hyg Environ Health 2022 247 114046
The third international hackathon for applying insights into large-scale genomic composition to use cases in a wide range of organisms.
Walker Kimberly, Kalra Divya, Lowdon Rebecca, Chen Guangyi, Molik David, Soto Daniela C, Dabbaghie Fawaz, Khleifat Ahmad Al, Mahmoud Medhat, Paulin Luis F, Raza Muhammad Sohail, Pfeifer Susanne P, Agustinho Daniel Paiva, Aliyev Elbay, Avdeyev Pavel, Barrozo Enrico R, Behera Sairam, Billingsley Kimberley, Chong Li Chuin, Choubey Deepak, De Coster Wouter, Fu Yilei, Gener Alejandro R, Hefferon Timothy, Henke David Morgan, Höps Wolfram, Illarionova Anastasia, Jochum Michael D, Jose Maria, Kesharwani Rupesh K, Kolora Sree Rohit Raj, Kubica Jędrzej, Lakra Priya, Lattimer Damaris, Liew Chia-Sin, Lo Bai-Wei, Lo Chunhsuan, Lötter Anneri, Majidian Sina, Mendem Suresh Kumar, Mondal Rajarshi, Ohmiya Hiroko, Parvin Nasrin, Peralta Carolina, Poon Chi-Lam, Prabhakaran Ramanandan, Saitou Marie, Sammi Aditi, Sanio Philippe, Sapoval Nicolae, Syed Najeeb, Treangen Todd, Wang Gaojianyong, Xu Tiancheng, Yang Jianzhi, Zhang Shangzhe, Zhou Weiyu, Sedlazeck Fritz J, Busby Ben. F1000Research 2022 11530 .
F1000Research 2022 11530 type
Key features of pneumococcal isolates recovered in Central and Northwestern Russia in 2011-2018 determined through whole-genome sequencing.
Egorova E , Kumar N , Gladstone RA , Urban Y , Voropaeva E , Chaplin AV , Rumiantseva E , Svistunova TS , Hawkins PA , Klugman KP , Breiman RF , McGee L , Bentley SD , Lo SW .
Microb Genom 2022 8 (9)
Emergence of a multidrug-resistant and virulent Streptococcus pneumoniae lineage mediates serotype replacement after PCV13: an international whole-genome sequencing study.
Lo SW , Mellor K , Cohen R , Alonso AR , Belman S , Kumar N , Hawkins PA , Gladstone RA , vonGottberg A , Veeraraghavan B , Ravikumar KL , Kandasamy R , Pollard SAJ , Saha SK , Bigogo G , Antonio M , Kwambana-Adams B , Mirza S , Shakoor S , Nisar I , Cornick JE , Lehmann D , Ford RL , Sigauque B , Turner P , Mosi J , Obaro SK , Dagan R , Diawara I , Skoczyska A , Wang H , Carter PE , Klugman KP , Rodgers G , Breiman RF , McGee L , Bentley SD , Almagro CM , Varon E .
Lancet Microbe 2022 3 (10) e735-e743
Use of Nucleic Acid Amplification Testing for Rapid Detection of Mycobacterium tuberculosis Complex Among US Tuberculosis Patients, 2011‒2017.
Kumar Varsha, Dalton Tracy L, Armstrong Lori R, Whitesell Amy, Li Rongxia, Starks Angela M. Open forum infectious diseases 2022 8(11) ofab528 .
Open forum infectious diseases 2022 8(11) ofab528
A Streptococcus pneumoniae lineage usually associated with pneumococcal conjugate vaccine (PCV) serotypes is the most common cause of serotype 35B invasive disease in South Africa, following routine use of PCV.
Ndlangisa KM , duPlessis M , Lo S , deGouveia L , Chaguza C , Antonio M , Kwambana-Adams B , Cornick J , Everett DB , Dagan R , Hawkins PA , Beall B , Corso A , GrassiAlmeida SC , Ochoa TJ , Obaro S , Shakoor S , Donkor ES , Gladstone RA , Ho PL , Paragi M , Doiphode S , Srifuengfung S , Ford R , Mosi J , Saha SK , Bigogo G , Sigauque B , Eser K , Elmdaghri N , Titov L , Turner P , Kumar KLR , Kandasamy R , Egorova E , Ip M , Breiman RF , Klugman KP , McGee L , Bentley SD , vonGottberg A , TheGlobalPneumococcalSequencing Consortium .
Microb Genom 2022 8 (4)
Stable flow-induced expression of KLK10 inhibits endothelial inflammation and atherosclerosis.
Williams D , Mahmoud M , Liu R , Andueza A , Kumar S , Kang DW , Zhang J , Tamargo I , Villa-Roel N , Baek KI , Lee H , An Y , Zhang L , Tate EW , Bagchi P , Pohl J , Mosnier LO , Diamandis EP , Mihara K , Hollenberg MD , Dai Z , Jo H .
Elife 2022 11
Rotavirus Strain Distribution before and after Introducing Rotavirus Vaccine in India.
Varghese T , AlokitKhakha S , Giri S , Nair NP , Badur M , Gathwala G , Chaudhury S , Kaushik S , Dash M , Mohakud NK , Ray RK , Mohanty P , Kumar CPG , Venkatasubramanian S , Arora R , RaghavaMohan V , Tate JE , Parashar UD , Kang G .
Pathogens 2021 10 (4)
Metagenomic sequencing generates the whole genomes of porcine rotavirus A, C, and H from the United States.
Hull JJA , Qi M , Montmayeur AM , Kumar D , Velasquez DE , Moon SS , Magaa LC , Betrapally N , Ng TFF , Jiang B , Marthaler D .
PLoS One 2020 15 (12) e0244498
Insecticide resistance status of Aedes aegypti in Bangladesh.
Al-Amin HM , Johora FT , Irish SR , Hossainey MRH , Vizcaino L , Paul KK , Khan WA , Haque R , Alam MS , Lenhart A .
Parasit Vectors 2020 13 (1) 622
Asymptomatic Infection of Marburg Virus Reservoir Bats Is Explained by a Strategy of Immunoprotective Disease Tolerance.
Guito JC , Prescott JB , Arnold CE , Amman BR , Schuh AJ , Spengler JR , Sealy TK , Harmon JR , Coleman-McCray JD , Kulcsar KA , Nagle ER , Kumar R , Palacios GF , Sanchez-Lockhart M , Towner JS .
Curr Biol 2020 31 (2) 257-270 e5
Conserved Oligomeric Golgi (COG) Complex Proteins Facilitate Orthopoxvirus Entry, Fusion and Spread.
Realegeno S , Priyamvada L , Kumar A , Blackburn JB , Hartloge C , Puschnik AS , Sambhara S , Olson VA , Carette JE , Lupashin V , Satheshkumar PS .
Viruses 2020 12 (7)
Cytokine signatures of Plasmodium vivax infection during pregnancy and delivery outcomes.
Dobano C , Bardaji A , Arevalo-Herrera M , Martinez-Espinosa FE , Botto-Menezes C , Padilla N , Menegon M , Kochar S , Kochar SK , Unger H , Ome-Kaius M , Rosanas-Urgell A , Malheiros A , Castellanos ME , Hans D , Desai M , Casellas A , Chitnis CE , Severini C , Mueller I , Rogerson S , Menendez C , Requena P .
PLoS Negl Trop Dis 2020 14 (5) e0008155
Influenza virus NS1- C/EBPβ gene regulatory complex inhibits RIG-I transcription.
Kumari R , Guo Z , Kumar A , Wiens M , Gangappa S , Katz JM , Cox NJ , Lal RB , Sarkar D , Fisher PB , Garcia-Sastre A , Fujita T , Kumar V , Sambhara S , Ranjan P , Lal SK .
Antiviral Res 2020 176 104747
Multiple importations and transmission of colistin-resistant Klebsiella pneumoniae in a hospital in northern India.
Mathur P , Khurana S , deMan TJB , Rastogi N , Katoch O , Veeraraghavan B , Neeravi AR , Venkatesan M , Kumar S , Sagar S , Gupta A , Aggarwal R , Soni KD , Malhotra R , Velayudhan A , Siromany V , Malpiedi P , Lutgring J , Laserson K , Gupta N , Srikantiah P , Sharma A .
Infect Control Hosp Epidemiol 2019 40 (12) 1-7
Identification and characterization of novel mosquito-borne (Kammavanpettai virus) and tick-borne (Wad Medani) reoviruses isolated in India.
Yadav PD , Shete AM , Nyayanit DA , Albarino CG , Jain S , Guerrero LW , Kumar S , Patil DY , Nichol ST , Mourya DT .
J Gen Virol 2018 99 (8) 991-1000
Taxonomy of the order Mononegavirales: update 2018.
Amarasinghe GK , ArechigaCeballos NG , Banyard AC , Basler CF , Bavari S , Bennett AJ , Blasdell KR , Briese T , Bukreyev A , Cai Y , Calisher CH , CamposLawson C , Chandran K , Chapman CA , Chiu CY , Choi KS , Collins PL , Dietzgen RG , Dolja VV , Dolnik O , Domier LL , Durrwald R , Dye JM , Easton AJ , Ebihara H , Echevarria JE , Fooks AR , Formenty PBH , Fouchier RAM , Freuling CM , Ghedin E , Goldberg TL , Hewson R , Horie M , Hyndman TH , Jiang D , Kityo R , Kobinger GP , Kondo H , Koonin EV , Krupovic M , Kurath G , Lamb RA , Lee B , Leroy EM , Maes P , Maisner A , Marston DA , Mor SK , Muller T , Muhlberger E , Ramirez VMN , Netesov SV , Ng TFF , Nowotny N , Palacios G , Patterson JL , Paweska JT , Payne SL , Prieto K , Rima BK , Rota P , Rubbenstroth D , Schwemmle M , Siddell S , Smither SJ , Song Q , Song T , Stenglein MD , Stone DM , Takada A , Tesh RB , Thomazelli LM , Tomonaga K , Tordo N , Towner JS , Vasilakis N , Vazquez-Moron S , Verdugo C , Volchkov VE , Wahl V , Walker PJ , Wang D , Wang LF , Wellehan JFX , Wiley MR , Whitfield AE , Wolf YI , Ye G , Zhang YZ , Kuhn JH .
Arch Virol 2018 163 (8) 2283-2294
Burden and impact of Plasmodium vivax in pregnancy: A multi-centre prospective observational study.
Bardají Azucena, Martínez-Espinosa Flor Ernestina, Arévalo-Herrera Myriam, Padilla Norma, Kochar Swati, Ome-Kaius Maria, Bôtto-Menezes Camila, Castellanos María Eugenia, Kochar Dhanpat Kumar, Kochar Sanjay Kumar, Betuela Inoni, Mueller Ivo, Rogerson Stephen, Chitnis Chetan, Hans Dhiraj, Menegon Michela, Severini Carlo, Del Portillo Hernando, Dobaño Carlota, Mayor Alfredo, Ordi Jaume, Piqueras Mireia, Sanz Sergi, Wahlgren Mats, Slutsker Laurence, Desai Meghna, Menéndez Clara, . PLoS neglected tropical diseases 2017 Jun 11(6) e0005606 .
PLoS neglected tropical diseases 2017 Jun 11(6) e0005606
Sequence variation in Plasmodium falciparum Histidine Rich Proteins 2 and 3 in Indian isolates: Implications for Malaria Rapid Diagnostic Test Performance.
Kumar Bharti Praveen, Singh Chandel Himanshu, Krishna Sri, Nema Shrikant, Ahmad Amreen, Udhayakumar Venkatachalam, Singh Neeru. Scientific reports 2017 7(1) 1308 .
Scientific reports 2017 7(1) 1308
Monkeypox virus host factor screen in haploid cells identifies essential role of GARP complex in extracellular virus formation.
Realegeno Susan, Puschnik Andreas S, Kumar Amrita, Goldsmith Cynthia, Burgado Jillybeth, Sambhara Suryaprakash, Olson Victoria A, Carroll Darin, Damon Inger, Hirata Tetsuya, Kinoshita Taroh, Carette Jan E, Satheshkumar Panayampalli Subbian. Journal of virology 2017 Mar .
Journal of virology 2017 Mar
Liquid Chromatography-Tandem Mass Spectrometry Assay of Leukocyte Acid a-Glucosidase for Post-Newborn Screening Evaluation of Pompe Disease.
Lin Na, Huang Jingyu, Violante Sara, Orsini Joseph J, Caggana Michele, Hughes Erin E, Stevens Colleen, DiAntonio Lisa, Chieh Liao Hsuan, Hong Xinying, Ghomashchi Farideh, Babu Kumar Arun, Zhou Hui, Kornreich Ruth, Wasserstein Melissa, Gelb Michael H, Yu Chunli. Clinical chemistry 2017 Feb .
Clinical chemistry 2017 Feb
Influenza virus exploits tunneling nanotubes for cell-to-cell spread.
Kumar Amrita, Kim Jin Hyang, Ranjan Priya, Metcalfe Maureen G, Cao Weiping, Mishina Margarita, Gangappa Shivaprakash, Guo Zhu, Boyden Edward S, Zaki Sherif, York Ian, García-Sastre Adolfo, Shaw Michael, Sambhara Suryaprakash. Scientific reports 2017 Jan 740360 .
Scientific reports 2017 Jan 740360
Complete Genome Sequences of Four Bordetella pertussis Vaccine Reference Strains from Serum Institute of India.
Weigand Michael R, Peng Yanhui, Loparev Vladimir, Johnson Taccara, Juieng Phalasy, Gairola Sunil, Kumar Rakesh, Shaligram Umesh, Gowrishankar Ramnath, Moura Hercules, Rees Jon, Schieltz David M, Williamson Yulanda, Woolfitt Adrian, Barr John, Tondella M Lucia, Williams Margaret M.Genome announcements 2016 Dec (6) .
Genome announcements 2016 Dec (6)
Prevalence of pfhrp2 and/or pfhrp3 Gene Deletion in Plasmodium falciparum Population in Eight Highly Endemic States in India.
Bharti Praveen Kumar, Chandel Himanshu Singh, Ahmad Amreen, Krishna Sri, Udhayakumar Venkatachalam, Singh Neeru. PloS one 11(8) e0157949 .
PloS one 11(8) e0157949
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