CDC-Authored Genomics and Precision Health Publications Database

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Last data update: Nov 04, 2024. (Total: 6390 publications)

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Records 1-30 (of 54 Records)

Query Trace: Kelley J[original query]
Reemergence of a big brown bat lyssavirus rabies variant in striped skunks in Flagstaff, Arizona, USA, 2021-2023 Gilbert AT , Van Pelt LI , Hastings LA , Gigante CM , Orciari LA , Kelley S , Fitzpatrick K , Condori REC , Li Y , Brunt S , Davis A , Hopken MW , Mankowski CCP , Wallace RM , Rupprecht CE , Chipman RB , Bergman DL . Vector Borne Zoonotic Dis 2024
SneakerNet: A modular quality assurance and quality check workflow for primary genomic and metagenomic read data. Griswold T , Kapsak C , Chen JC , den Bakker HC , Williams G , Kelley A , Vidyaprakash E , Katz LS . J Open Source Softw 2021 6 (60)
Molecular Markers of Sulfadoxine-Pyrimethamine Resistance in Samples from Children with Uncomplicated Plasmodium falciparum at Three Sites in Angola in 2019. Rosillo SR , Dimbu PR , Cândido ALM , Oh JM , Ferreira CM , Nieto Andrade B , Labuda S , Horth R , Kelley J , Morais JFM , Fortes F , Martins JF , Talundzic E , Pluciński MM . Antimicrob Agents Chemother 2023 67 (4) e0160122
Portable and cost-effective genetic detection and characterization of Plasmodium falciparum hrp2 using the MinION sequencer. Sabin S , Jones S , Patel D , Subramaniam G , Kelley J , Aidoo M , Talundzic E . Sci Rep 2023 13 (1) 2893
Evaluation of a parasite-density based pooled targeted amplicon deep sequencing (TADS) method for molecular surveillance of Plasmodium falciparum drug resistance genes in Haiti. Louha S , Herman C , Gupta M , Patel D , Kelley J , Oh JM , Guru J , Lemoine JF , Chang MA , Venkatachalam U , Rogier E , Talundzic E . PLoS One 2022 17 (1) e0262616
Mongooses (Urva auropunctata) as reservoir hosts of Leptospira species in the United States Virgin Islands, 2019-2020. Cranford HM , Browne AS , LeCount K , Anderson T , Hamond C , Schlater L , Stuber T , Burke-France VJ , Taylor M , Harrison CJ , Matias KY , Medley A , Rossow J , Wiese N , Jankelunas L , de Wilde L , Mehalick M , Blanchard GL , Garcia KR , McKinley AS , Lombard CD , Angeli NF , Horner D , Kelley T , Worthington DJ , Valiulis J , Bradford B , Berentsen A , Salzer JS , Galloway R , Schafer IJ , Bisgard K , Roth J , Ellis BR , Ellis EM , Nally JE . PLoS Negl Trop Dis 2021 15 (11) e0009859
Comparative Genomic and Transcriptomic Analysis of Naegleria fowleri Clinical and Environmental Isolates. Joseph SJ , Park S , Kelley A , Roy S , Cope JR , Ali IKM . mSphere 2021 6 (4) e0063721
Plasmodium falciparum kelch 13 Mutations, 9 Countries in Africa, 2014-2018. Schmedes SE , Patel D , Dhal S , Kelley J , Svigel SS , Dimbu PR , Adeothy AL , Kahunu GM , Nkoli PM , Beavogui AH , Kariuki S , Mathanga DP , Koita O , Ishengoma D , Mohamad A , Hawela M , Moriarty LF , Samuels AM , Gutman J , Plucinski MM , Udhayakumar V , Zhou Z , Lucchi NW , Venkatesan M , Halsey ES , Talundzic E . Emerg Infect Dis 2021 27 (7) 1902-1908
Targeted deep amplicon sequencing of antimalarial resistance markers in Plasmodium falciparum isolates from Cameroon. L'Episcopia M , Kelley J , Dongho BGD , Patel D , Schmedes S , Ravishankar S , Perrotti E , Modiano D , Lucchi NW , Russo G , Talundzic E , Severini C . Int J Infect Dis 2021 107 234-241
A Comparison of Less Invasive SARS-CoV-2 Diagnostic Specimens in Nursing Home Residents - Arkansas, June-August 2020. Gable P , Huang JY , Gilbert SE , Bollinger S , Lyons AK , Sabour S , Surie D , Biedron C , Haney T , Beshearse E , Gregory CJ , Seely KA , Clemmons NS , Patil N , Kothari A , Gulley T , Garner K , Anderson K , Thornburg NJ , Halpin AL , McDonald LC , Kutty PK , Brown AC . Clin Infect Dis 2021 73 S58-S64
Draft Chromosome Sequences of a Clinical Isolate of the Free-Living Ameba Naegleria fowleri. Ali IKM , Kelley A , Joseph SJ , Park S , Roy S , Jackson J , Cope JR , Rowe LA , Burroughs M , Sheth M , Batra D , Loparev V . Microbiol Resour Announc 2021 10 (15)
Performance of the BinaxNOW COVID-19 Antigen Card test relative to the SARS-CoV-2 real-time reverse transcriptase polymerase chain reaction assay among symptomatic and asymptomatic healthcare employees. James AE , Gulley T , Kothari A , Holder K , Garner K , Patil N . Infect Control Hosp Epidemiol 2021 43 (1) 1-15
COVID-19 Outbreak Associated with a 10-Day Motorcycle Rally in a Neighboring State - Minnesota, August-September 2020. Firestone MJ , Wienkes H , Garfin J , Wang X , Vilen K , Smith KE , Holzbauer S , Plumb M , Pung K , Medus C , Yao JD , Binnicker MJ , Nelson AC , Yohe S , Como-Sabetti K , Ehresmann K , Lynfield R , Danila R . MMWR Morb Mortal Wkly Rep 2020 69 (47) 1771-1776
Continued low efficacy of artemether-lumefantrine in Angola, 2019. Dimbu PR , Horth R , Cândido ALM , Ferreira CM , Caquece F , Garcia LEA , André K , Pembele G , Jandondo D , Bondo BJ , Nieto Andrade B , Labuda S , Ponce de León G , Kelley J , Patel D , Svigel SS , Talundzic E , Lucchi N , Morais JFM , Fortes F , Martins JF , Pluciński MM . Antimicrob Agents Chemother 2020 65 (2)
Nosocomial hepatitis A outbreak among healthcare workers and patients in a community hospital during an ongoing statewide outbreak. Brennan J , Mullins H , Tobey K , Jones C , Kainer MA , Fiscus M , May S , Dunn JR , Schaffner W , Jones TF . Infect Control Hosp Epidemiol 2020 42 (2) 1-3
Evaluation of an ensemble-based distance statistic for clustering MLST datasets using epidemiologically defined clusters of cyclosporiasis. Nascimento FS , Barratt J , Houghton K , Plucinski M , Kelley J , Casillas S , Bennett CC , Snider C , Tuladhar R , Zhang J , Clemons B , Madison-Antenucci S , Russell A , Cebelinski E , Haan J , Robinson T , Arrowood MJ , Talundzic E , Bradbury RS , Qvarnstrom Y . Epidemiol Infect 2020 148 e172
Malaria Risk and Prevention in Asian Migrants to Angola. Martins JF , Marques C , Nieto-Andrade B , Kelley J , Patel D , Nace D , Herman C , Barratt J , Ponce de Leon G , Talundzic E , Rogier E , Halsey ES , Plucinski MM . Am J Trop Med Hyg 2020 103 (5) 1918-1926
Exploratory analysis of machine learning approaches for surveillance of Zika-associated birth defects. Lusk R , Zimmerman J , VanMaldeghem K , Kim S , Roth NM , Lavinder J , Fulton A , Raycraft M , Ellington SR , Galang RR . Birth Defects Res 2020 112 (18) 1450-1460
Comparison of Molecular Subtyping and Antimicrobial Resistance Detection Methods Used in a Large Multi-State Outbreak of Extensively Drug-Resistant Campylobacter jejuni Infections Linked to Pet Store Puppies. Joseph LA , Francois Watkins LK , Chen J , Tagg KA , Bennett C , Caidi H , Folster JP , Laughlin ME , Koski L , Silver R , Stevenson L , Robertson S , Pruckler J , Nichols M , Pouseele H , Carleton HA , Basler C , Friedman CR , Geissler A , Hise KB , Aubert RD . J Clin Microbiol 2020 58 (10)
Efficacy and safety of artesunate-amodiaquine and artemether-lumefantrine and prevalence of molecular markers associated with resistance, Guinea: an open-label two-arm randomised controlled trial. Beavogui AH , Camara A , Delamou A , Diallo MS , Doumbouya A , Kourouma K , Bouedouno P , Guilavogui T , Dos Santos Souza S , Kelley J , Talundzic E , Fofana A , Plucinski MM . Malar J 2020 19 (1) 223
Targeted deep amplicon sequencing of kelch 13 and cytochrome b in Plasmodium falciparum isolates from an endemic African country using the Malaria Resistance Surveillance (MaRS) protocol. L'Episcopia M , Kelley J , Patel D , Schmedes S , Ravishankar S , Menegon M , Perrotti E , Nurahmed AM , Talha AA , Nour BY , Lucchi N , Severini C , Talundzic E . Parasit Vectors 2020 13 (1) 137
Viruses in the Built Environment (VIBE) meeting report. Prussin AJ 2nd , Belser JA , Bischoff W , Kelley ST , Lin K , Lindsley WG , Nshimyimana JP , Schuit M , Wu Z , Bibby K , Marr LC . Microbiome 2020 8 (1) 1
Bloodstream Infections with a Novel Nontuberculous Mycobacterium Involving 52 Outpatient Oncology Clinic Patients - Arkansas, 2018. Labuda SM , Garner K , Cima M , Moulton-Meissner H , Laufer Halpin A , Charles-Toney N , Yu P , Bolton E , Pierce R , Crist MB , Gomes D , Gable P , McAllister G , Lawsin A , Houston H , Patil N , Wheeler JG , Bradsher R , Vyas K , Haselow D . Clin Infect Dis 2019 71 (7) e178-e185
Onsite investigation at a mail-order hatchery following a multistate Salmonella illness outbreak linked to live poultry-United States, 2018. Robertson SA , Sidge JL , Koski L , Hardy MC , Stevenson L , Signs K , Stobierski MG , Bidol S , Donovan D , Soehnlen M , Jones K , Robeson S , Hambley A , Stefanovsky L , Brandenburg J , Hise K , Tolar B , Nichols MC , Basler C . Poult Sci 2019 98 (12) 6964-6972
A pharmacokinetic and pharmacogenetic evaluation of contraceptive implants and antiretroviral therapy among women in Kenya and Uganda. Patel RC , Stalter RM , Thomas KK , Tamraz B , Blue SW , Erikson DW , Kim CJ , Kelley EJ , Nanda K , Kourtis AP , Lingappa JR , Mugo N , Baeten JM , Scarsi KK . AIDS 2019 33 (13) 1995-2004
Interpretation of Whole-Genome Sequencing for Enteric Disease Surveillance and Outbreak Investigation. Besser JM , Carleton HA , Trees E , Stroika SG , Hise K , Wise M , Gerner-Smidt P . Foodborne Pathog Dis 2019 16 (7) 504-512
PulseNet: Entering the Age of Next-Generation Sequencing. Ribot EM , Freeman M , Hise KB , Gerner-Smidt P . Foodborne Pathog Dis 2019 16 (7) 451-456
Sepsis Attributed to Bacterial Contamination of Platelets Associated with a Potential Common Source - Multiple States, 2018. Jones SA , Jones JM , Leung V , Nakashima AK , Oakeson KF , Smith AR , Hunter R , Kim JJ , Cumming M , McHale E , Young PP , Fridey JL , Kelley WE , Stramer SL , Wagner SJ , West FB , Herron R , Snyder E , Hendrickson JE , Peaper DR , Gundlapalli AV , Langelier C , Miller S , Nambiar A , Moayeri M , Kamm J , Moulton-Meissner H , Annambhotla P , Gable P , McAllister GA , Breaker E , Sula E , Halpin AL , Basavaraju SV . MMWR Morb Mortal Wkly Rep 2019 68 (23) 519-523
Evolution and genetic diversity of the k13 gene associated with artemisinin delayed parasite clearance in Plasmodium falciparum . Pacheco MA , Kadakia ER , Chaudhary Z , Perkins DJ , Kelley J , Ravishankar S , Cranfield M , Talundzic E , Udhayakumar V , Escalante AA . Antimicrob Agents Chemother 2019 63 (8)
An Overview of PulseNet USA Databases. Tolar B , Joseph LA , Schroeder MN , Stroika S , Ribot EM , Hise KB , Gerner-Smidt P . Foodborne Pathog Dis 2019 16 (7) 457-462