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CDC-Authored Genomics and Precision Health Publications Database|Home|Public Health Genomics and Precision Health Knowledge Base (PHGKB)

CDC-Authored Genomics and Precision Health Publications Database


Last data update: May 12, 2025. (Total: 6675 publications)
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Records 1-28 (of 28 Records)
Query Trace: Hsu S[original query]
Detection of a human adenovirus outbreak, including some critical infections, using multipathogen testing at a large university, September 2022-January 2023
Montgomery JP , Marquez JL , Nord J , Stamper AR , Edwards EA , Valentini N , Frank CJ , Washer LL , Ernst RD , Park JI , Price D , Collins J , Smith-jeffcoat sE , Hu f , Knox cL , Khan r , Lu x , Kirking hL , Hsu cH .
Open Forum Infect Dis 2024 11 (5) ofae192 type
Identification of large adenovirus infection outbreak at university by multipathogen testing, South Carolina, USA, 2022
Tori ME , Chontos-Komorowski J , Stacy J , Lamson DM , St George K , Lail AT , Stewart-Grant HA , Bell LJ , Kirking HL , Hsu CH .
Emerg Infect Dis 2024 30 (2) 358-362 type
Novel strain of multidrug non-susceptible Neisseria gonorrhoeae in the USA
Reimche JL , Pham CD , Joseph SJ , Hutton S , Cartee JC , Ruan Y , Breaux M , Ivanof C , Joshi A , DeMartino M , Kirby JE , Barbee LA , Kersh EN , Roosevelt KA , Hsu KK .
Lancet Infect Dis 2024 type
Evidence review and recommendations for the implementation of genomics for antimicrobial resistance surveillance: reports from an international expert group
Baker KS , Jauneikaite E , Nunn JG , Midega JT , Atun R , Holt KE , Walia K , Howden BP , Tate H , Okeke IN , Carattoli A , Hsu LY , Hopkins KL , Muloi DM , Wheeler NE , Aanensen DM , Mason LCE , Rodgus J , Hendriksen RS , Essack SY , Egyir B , Halpin AL , MacCannell DR , Campos J , Srikantiah P , Feasey NA , Peacock SJ .
Lancet Microbe 2023 4 (12) e1035-e1039 type
Genomics for antimicrobial resistance surveillance to support infection prevention and control in health-care facilities
Jauneikaite E , Baker KS , Nunn JG , Midega JT , Hsu LY , Singh SR , Halpin AL , Hopkins KL , Price JR , Srikantiah P , Egyir B , Okeke IN , Holt KE , Peacock SJ , Feasey NA .
Lancet Microbe 2023 4 (12) e1040-e1046 type
Genomic analysis of azithromycin-resistant Salmonella from food animals at slaughter and processing, and retail meats, 2011-2021, United States
Ge B , Mukherjee S , Li C , Harrison LB , Hsu CH , Tran TT , Whichard JM , Dessai U , Singh R , Gilbert JM , Strain EA , McDermott PF , Zhao S .
Microbiol Spectr 2023 e0348523 type
In silico toxicology protocols.
Myatt GJ , Ahlberg E , Akahori Y , Allen D , Amberg A , Anger LT , Aptula A , Auerbach S , Beilke L , Bellion P , Benigni R , Bercu J , Booth ED , Bower D , Brigo A , Burden N , Cammerer Z , Cronin MTD , Cross KP , Custer L , Dettwiler M , Dobo K , Ford KA , Fortin MC , Gad-McDonald SE , Gellatly N , Gervais V , Glover KP , Glowienke S , Van Gompel J , Gutsell S , Hardy B , Harvey JS , Hillegass J , Honma M , Hsieh JH , Hsu CW , Hughes K , Johnson C , Jolly R , Jones D , Kemper R , Kenyon MO , Kim MT , Kruhlak NL , Kulkarni SA , Kümmerer K , Leavitt P , Majer B , Masten S , Miller S , Moser J , Mumtaz M , Muster W , Neilson L , Oprea TI , Patlewicz G , Paulino A , Lo Piparo E , Powley M , Quigley DP , Reddy MV , Richarz AN , Ruiz P , Schilter B , Serafimova R , Simpson W , Stavitskaya L , Stidl R , Suarez-Rodriguez D , Szabo DT , Teasdale A , Trejo-Martin A , Valentin JP , Vuorinen A , Wall BA , Watts P , White AT , Wichard J , Witt KL , Woolley A , Woolley D , Zwickl C , Hasselgren C .
Regul Toxicol Pharmacol 2018 96 1-17
Tuberculosis Outbreak in a State Prison System - Washington, 2021-2022.
Stalter RM , Pecha M , Dov L , Miller D , Ghazal Z , Wortham J , Althomsons S , Deutsch-Feldman M , Stewart R , Felix D , Hsu S , Strick LB .
MMWR Morb Mortal Wkly Rep 2023 72 (12) 309-312 type
Household characteristics associated with surface contamination of SARS-CoV-2 and frequency of RT-PCR and viral culture positivity-California and Colorado, 2021.
Shragai T , Pratt C , Castro Georgi J , Donnelly MAP , Schwartz NG , Soto R , Chuey M , Chu VT , Marcenac P , Park GW , Ahmad A , Albanese B , Totten SE , Austin B , Bunkley P , Cherney B , Dietrich EA , Figueroa E , Folster JM , Godino C , Herzegh O , Lindell K , Relja B , Sheldon SW , Tong S , Vinjé J , Thornburg NJ , Matanock AM , Hughes LJ , Stringer G , Hudziec M , Beatty ME , Tate JE , Kirking HL , Hsu CH .
PLoS One 2022 17 (10) e0274946 type
Mortality Risk Among Patients Hospitalized Primarily for COVID-19 During the Omicron and Delta Variant Pandemic Periods - United States, April 2020-June 2022.
Adjei S , Hong K , Molinari NM , Bull-Otterson L , Ajani UA , Gundlapalli AV , Harris AM , Hsu J , Kadri SS , Starnes J , Yeoman K , Boehmer TK .
MMWR Morb Mortal Wkly Rep 2022 71 (37) 1182-1189
Genomic Diversity, Antimicrobial Resistance, and Virulence Gene Profiles of Salmonella Serovar Kentucky Isolated from Humans, Food, and Animal Ceca Content Sources in the United States.
Tate H , Hsu CH , Chen JC , Han J , Foley SL , Folster JP , Francois Watkins LK , Reynolds J , Tillman GE , Nyirabahizi E , Zhao S .
Foodborne Pathog Dis 2022 19 (8) 509-521 type
SARS-CoV-2 infection risk among vaccinated and unvaccinated household members during the Alpha variant surge - Denver, Colorado, and San Diego, California, January-April 2021.
McCormick DW , Konkle SL , Magleby R , Chakrabarti AK , Cherney B , Lindell K , Namageyo-Funa A , Visser S , Soto RA , Donnelly MAP , Stringer G , Austin B , Beatty ME , Stous S , Albanese BA , Chu VT , Chuey M , Dietrich EA , Drobeniuc J , Folster JM , Killerby ME , Lehman JA , McDonald EC , Ruffin J , Schwartz NG , Sheldon SW , Sleweon S , Thornburg NJ , Hughes LJ , Petway M , Tong S , Whaley MJ , Kirking HL , Tate JE , Hsu CH , Matanock A .
Vaccine 2022 40 (33) 4845-4855
Factors Associated With Severe Illness in Patients Aged <21 Years Hospitalized for COVID-19.
Choudhary R , Webber BJ , Womack LS , Dupont HK , Chiu SK , Wanga V , Gerdes ME , Hsu S , Shi DS , Dulski TM , Idubor OI , Wendel AM , Agathis NT , Anderson K , Boyles T , Click ES , Silva JD , Evans ME , Gold JAW , Haston JC , Logan P , Maloney SA , Martinez M , Natarajan P , Spicer KB , Swancutt M , Stevens VA , Rogers-Brown J , Chandra G , Light M , Barr FE , Snowden J , Kociolek LK , McHugh M , Wessel DL , Simpson JN , Gorman KC , Breslin KA , DeBiasi RL , Thompson A , Kline MW , Boom JA , Singh IR , Dowlin M , Wietecha M , Schweitzer B , Morris SB , Koumans EH , Ko JY , Siegel DA , Kimball AA .
Hosp Pediatr 2022 12 (9) 760-783
Household Transmission and Symptomology of SARS-CoV-2 Alpha Variant Among Children-California and Colorado, 2021.
Waltenburg MA , Whaley MJ , Chancey RJ , Donnelly MAP , Chuey MR , Soto R , Schwartz NG , Chu VT , Sleweon S , McCormick DW , Uehara A , Retchless AC , Tong S , Folster JM , Petway M , Thornburg NJ , Drobeniuc J , Austin B , Hudziec MM , Stringer G , Albanese BA , Totten SE , Matzinger SR , Staples JE , Killerby ME , Hughes LJ , Matanock A , Beatty M , Tate JE , Kirking HL , Hsu CH .
J Pediatr 2022 247 29-37 e7
Household transmission of SARS-CoV-2 Alpha variant - United States, 2021.
Donnelly MAP , Chuey MR , Soto R , Schwartz NG , Chu VT , Konkle SL , Sleweon S , Ruffin J , Haberling DL , Guagliardo SAJ , Stoddard RA , Anderson RD , Morgan CN , Rossetti R , McCormick DW , Magleby R , Sheldon SW , Dietrich EA , Uehara A , Retchless AC , Tong S , Folster JM , Drobeniuc J , Petway ME , Austin B , Stous S , McDonald E , Jain S , Hudziec MM , Stringer G , Albanese BA , Totten SE , Staples JE , Killerby ME , Hughes L , Matanock A , Beatty M , Tate JE , Kirking HL , Hsu CH .
Clin Infect Dis 2022 75 (1) e122-e132 type
Precision Health Analytics With Predictive Analytics and Implementation Research: JACC State-of-the-Art Review.
Pearson TA , Califf RM , Roper R , Engelgau MM , Khoury MJ , Alcantara C , Blakely C , Boyce CA , Brown M , Croxton TL , Fenton K , Green Parker MC , Hamilton A , Helmchen L , Hsu LL , Kent DM , Kind A , Kravitz J , Papanicolaou GJ , Prosperi M , Quinn M , Price LN , Shireman PK , Smith SM , Szczesniak R , Goff DC Jr , Mensah GA .
J Am Coll Cardiol 2020 76 (3) 306-320 type
Genomic surveillance reveals multiple introductions of SARS-CoV-2 into Northern California.
Deng X , Gu W , Federman S , du Plessis L , Pybus OG , Faria N , Wang C , Yu G , Bushnell B , Pan CY , Guevara H , Sotomayor-Gonzalez A , Zorn K , Gopez A , Servellita V , Hsu E , Miller S , Bedford T , Greninger AL , Roychoudhury P , Starita LM , Famulare M , Chu HY , Shendure J , Jerome KR , Anderson C , Gangavarapu K , Zeller M , Spencer E , Andersen KG , MacCannell D , Paden CR , Li Y , Zhang J , Tong S , Armstrong G , Morrow S , Willis M , Matyas BT , Mase S , Kasirye O , Park M , Masinde G , Chan C , Yu AT , Chai SJ , Villarino E , Bonin B , Wadford DA , Chiu CY .
Science 2020 369 (6503) 582-587
Opioid Use Fueling HIV Transmission in an Urban Setting: An Outbreak of HIV Infection Among People Who Inject Drugs-Massachusetts, 2015-2018.
Alpren C , Dawson EL , John B , Cranston K , Panneer N , Fukuda HD , Roosevelt K , Klevens RM , Bryant J , Peters PJ , Lyss SB , Switzer W , Burrage A , Murray A , Agnew-Brune C , Stiles T , McClung P , Campbell EM , Breen C , Randall LM , Dasgupta S , Onofrey S , Bixler D , Hampton K , Jaeger JL , Hsu KK , Adih W , Callis B , Goldman LR , Danner SP , Jia H , Tumpney M , Board A , Brown C , DeMaria A Jr , Buchacz K .
Am J Public Health 2019 110 (1) e1-e8 type
Validating the NCBI AMRFinder Tool and Resistance Gene Database Using Antimicrobial Resistance Genotype-Phenotype Correlations in a Collection of NARMS Isolates.
Feldgarden M , Brover V , Haft DH , Prasad AB , Slotta DJ , Tolstoy I , Tyson GH , Zhao S , Hsu CH , McDermott PF , Tadesse DA , Morales C , Simmons M , Tillman G , Wasilenko J , Folster JP , Klimke W .
Antimicrob Agents Chemother 2019 63 (11) type
Using deep learning to identify translational research in genomic medicine beyond bench to bedside.
Hsu YY , Clyne M , Wei CH , Khoury MJ , Lu Z .
Database (Oxford) 2019 2019 type
Impact of Rapid Susceptibility Testing and Antibiotic Selection Strategy on the Emergence and Spread of Antibiotic Resistance in Gonorrhea.
Tuite AR , Gift TL , Chesson HW , Hsu K , Salomon JA , Grad YH .
J Infect Dis 2017 216 (9) 1141-1149 type
Comparative Analysis of Extended Spectrum Beta- Lactamase CTX-M-65-Producing Salmonella Infantis Isolates from Humans, Food Animals, and Retail Chickens in the United States.
Tate H , Folster JP , Hsu CH , Chen J , Hoffmann M , Li C , Morales C , Tyson GH , Mukerjee S , Brown AC , Green A , Wilson W , Dessai U , Abbott J , Joseph L , Haro J , Ayers S , McDermott PF , Zhao S .
Antimicrob Agents Chemother 2017 61 (7)
Unique Presentation of Orf Virus Infection in a Thermal Burn Patient After Receiving an Autologous Skin Graft.
Hsu CH , Rokni GR , Aghazadeh N , Brinster N , Li Y , Muehlenbachs A , Goldsmith CS , Zhao H , Petersen B , McCollum AM , Reynolds MG .
J Infect Dis 2016 214 (8) 1171-4
A hybrid approach for the automated finishing of bacterial genomes.
Bashir A , Klammer AA , Robins WP , Chin CS , Webster D , Paxinos E , Hsu D , Ashby M , Wang S , Peluso P , Sebra R , Sorenson J , Bullard J , Yen J , Valdovino M , Mollova E , Luong K , Lin S , Lamay B , Joshi A , Rowe L , Frace M , Tarr CL , Turnsek M , Davis BM , Kasarskis A , Mekalanos JJ , Waldor MK , Schadt EE .
Nat Biotechnol 2012 30 (7) 701-707
Permanent genetic resources added to Molecular Ecology Resources Database 1 October 2011-30 November 2011.
Molecular Ecology Resources Primer Development Consortium , Abreu AG , Albaina A , Alpermann TJ , Apkenas VE , Bankhead-Dronnet S , Bergek S , Berumen ML , Cho CH , Clobert J , Coulon A , DEFeraudy D , Estonba A , Hankeln T , Hochkirch A , Hsu TW , Huang TJ , Irigoien X , Iriondo M , Kay KM , Kinitz T , Kothera L , LEHenanff M , Lieutier F , Lourdais O , Macrini CM , Manzano C , Martin C , Morris VR , Nanninga G , Pardo MA , Plieske J , Pointeau S , Prestegaard T , Quack M , Richard M , Savage HM , Schwarcz KD , Shade J , Simms EL , Solferini VN , Stevens VM , Veith M , Wen MJ , Wicker F , Yost JM , Zarraonaindia I .
Mol Ecol Resour 2012 12 (2) 374-6
Monitoring HPV type-specific prevalence over time through clinic-based surveillance: a perspective on vaccine effectiveness.
Gaffga NH , Flagg EW , Weinstock HS , Shlay JC , Ghanem KG , Koutsky LA , Kerndt PR , Hsu KK , Unger ER , Datta SD .
Vaccine 2012 30 (11) 1959-64
Genome-wide copy number alterations in subtypes of invasive breast cancers in young white and African American women.
Loo LW , Wang Y , Flynn EM , Lund MJ , Bowles EJ , Buist DS , Liff JM , Flagg EW , Coates RJ , Eley JW , Hsu L , Porter PL .
Breast Cancer Res Treat 2011 127 (1) 297-308
The Scientific Foundation for personal genomics: recommendations from a National Institutes of Health-Centers for Disease Control and Prevention multidisciplinary workshop.
Khoury MJ , McBride C , Schully SD , Ioannidis JP , Feero WG , Janssens AC , Gwinn M , Simons-Morton DG , Bernhardt JM , Cargill M , Chanock SJ , Church GM , Coates RJ , Collins FS , Croyle RT , Davis BR , Downing GJ , Duross A , Friedman S , Gail MH , Ginsburg GS , Green RC , Greene MH , Greenland P , Gulcher JR , Hsu A , Hudson KL , Kardia SL , Kimmel PL , Lauer MS , Miller AM , Offit K , Ransohoff DF , Roberts HS , Rasooly RS , Stefansson K , Terry SF , Teutsch SM , Trepanier A , Wanke KL , Witte JS , Xu J .
Genet Med 2009 11 (8) 559-67 type
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