CDC-Authored Genomics and Precision Health Publications Database
Last data update: Dec 02, 2024. (Total: 6432 publications)
| Query Trace: Hossain J[original query] |
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| Genomic epidemiology of early SARS-CoV-2 transmission dynamics in Bangladesh
Carnegie L , McCrone JT , du Plessis L , Hasan M , Ali MZ , Begum R , Hassan MZ , Islam S , Rahman MH , Uddin ASM , Sarker MS , Das T , Hossain M , Khan M , Razu MH , Akram A , Arina S , Hoque E , Molla MMA , Nafisaa T , Angra P , Rambaut A , Pullan ST , Osman KL , Hoque MA , Biswas P , Flora MS , Raghwani J , Fournié G , Samad MA , Hill SC . Virol J 2024 21 (1) 291 
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| Emergence of the novel sixth Candida auris Clade VI in Bangladesh
Khan T , Faysal NI , Hossain MM , Mah EMuneer S , Haider A , Moon SB , Sen D , Ahmed D , Parnell LA , Jubair M , Chow NA , Chowdhury F , Rahman M . Microbiol Spectr 2024 e0354023
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| Clinical severity of enteric viruses detected using a quantitative molecular assay compared to conventional assays in the Global Enteric Multicenter Study
Cates J , Powell H , Platts-Mills J , Nasrin D , Panchalingam S , Sow SO , Traore A , Sur D , Ramamurthy T , Zaidi AKM , Kabir F , Faruque ASG , Ahmed D , Breiman RF , Omore R , Ochieng JB , Hossain MJ , Antonio M , Mandomando I , Vubil D , Nataro JP , Levine MM , Parashar UD , Kotloff KL , Tate JE . J Infect Dis 2024
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| Diarrhea in young children from low-income countries leads to large-scale alterations in intestinal microbiota composition.
Pop M , Walker AW , Paulson J , Lindsay B , Antonio M , Hossain MA , Oundo J , Tamboura B , Mai V , Astrovskaya I , Corrada Bravo H , Rance R , Stares M , Levine MM , Panchalingam S , Kotloff K , Ikumapayi UN , Ebruke C , Adeyemi M , Ahmed D , Ahmed F , Alam MT , Amin R , Siddiqui S , Ochieng JB , Ouma E , Juma J , Mailu E , Omore R , Morris JG , Breiman RF , Saha D , Parkhill J , Nataro JP , Stine OC . Genome Biol 2014 15 (6) R76 |
| In silico prediction of interaction between Nipah virus attachment glycoprotein and host cell receptors Ephrin-B2 and Ephrin-B3 in domestic and peridomestic mammals
Hoque AF , Rahman MDM , Lamia AS , Islam A , Klena JD , Satter SM , Epstein JH , Montgomery JM , Hossain ME , Shirin T , Jahid IK , Rahman MZ . Infect Genet Evol 2023 116 105516
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| Epidemiology and risk factors of norovirus infections among diarrhea patients admitted to tertiary care hospitals in Bangladesh
Satter SM , Abdullah Z , Fariha F , Karim Y , Rahman MM , Balachandran N , Ghosh PK , Hossain ME , Mirza SA , Hall AJ , Gastañaduy PA , Rahman M , Vinjé J , Parashar UD . J Infect Dis 2023 228 (7) 818-828 |
| Structural basis of the American mink ACE2 binding by Y453F trimeric spike glycoproteins of SARS-CoV-2
Ahn H , Calderon BM , Fan X , Gao Y , Horgan NL , Jiang N , Blohm DS , Hossain J , Rayyan NWK , Osman SH , Lin X , Currier M , Steel J , Wentworth DE , Zhou B , Liang B . J Med Virol 2023 95 (10) e29163 |
| Histo-Blood Group Antigen Null Phenotypes Associated With a Decreased Risk of Clinical Rotavirus Vaccine Failure Among Children <2 Years of Age Participating in the Vaccine Impact on Diarrhea in Africa (VIDA) Study in Kenya, Mali, and the Gambia
Schwartz LM , Oshinsky J , Reymann M , Esona MD , Bowen MD , Jahangir Hossain M , Zaman SMA , Jones JCM , Antonio M , Badji H , Sarwar G , Sow SO , Sanogo D , Keita AM , Tamboura B , Traoré A , Onwuchekwa U , Omore R , Verani JR , Awuor AO , Ochieng JB , Juma J , Ogwel B , Parashar UD , Tate JE , Kasumba IN , Tennant SM , Neuzil KM , Rowhani-Rahbar A , Elizabeth Halloran M , Atmar RL , Pasetti MF , Kotloff KL . Clin Infect Dis 2023 76 S153-s161
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| Clinical and epidemiologic features of cryptosporidium-associated diarrheal disease among young children living in Sub-Saharan Africa: The Vaccine Impact on Diarrhea in Africa (VIDA) Study
Hossain MJ , Powell H , Sow SO , Omore R , Roose A , Jones JCM , Zaman SMA , Badji H , Sarwar G , Kasumba IN , Onwuchekwa U , Doh S , Awuor AO , Ochieng JB , Verani JR , Liu J , Tennant SM , Nasrin D , Jamka LP , Liang Y , Howie SRC , Antonio M , Houpt ER , Kotloff KL . Clin Infect Dis 2023 76 S97-s105 |
| Prevalence, clinical severity, and seasonality of adenovirus 40/41, astrovirus, sapovirus, and rotavirus among young children with moderate-to-severe diarrhea: Results from the Vaccine Impact on Diarrhea in Africa (VIDA) Study
Keita AM , Doh S , Sow SO , Powell H , Omore R , Jahangir Hossain M , Ogwel B , Ochieng JB , Jones JCM , Zaman SMA , Awuor AO , Juma J , Nasrin D , Liu J , Traoré A , Onwuchekwa U , Badji H , Sarwar G , Antonio M , Houpt ER , Tennant SM , Kasumba IN , Jamka LP , Roose A , Platts-Mills JA , Verani JR , Tate JE , Parashar UD , Neuzil KM , Kotloff KL . Clin Infect Dis 2023 76 S123-s131 |
| Epidemiology of enteroaggregative, enteropathogenic, and shiga toxin-producing escherichia coli among children aged <5 years in 3 countries in Africa, 2015-2018: Vaccine Impact on Diarrhea in Africa (VIDA) Study
Ochieng JB , Powell H , Sugerman CE , Omore R , Ogwel B , Juma J , Awuor AO , Sow SO , Sanogo D , Onwuchekwa U , Keita AM , Traoré A , Badji H , Hossain MJ , Jones JCM , Kasumba IN , Nasrin D , Roose A , Liang Y , Jamka LP , Antonio M , Platts-Mills JA , Liu J , Houpt ER , Mintz ED , Hunsperger E , Onyango CO , Strockbine N , Widdowson MA , Verani JR , Tennant SM , Kotloff KL . Clin Infect Dis 2023 76 S77-s86 |
| Norovirus disease among children <5 years in 3 Sub-Saharan African countries: Findings from the Vaccine Impact on Diarrhea in Africa (VIDA) Study, 2015-2018
Omore R , Powell H , Sow SO , Jahangir Hossain M , Ogwel B , Doh S , Ochieng JB , Jones JCM , Zaman SMA , Awuor AO , Juma J , Kasumba IN , Roose A , Jamka LP , Nasrin D , Liu J , Keita AM , Traoré A , Onwuchekwa U , Badji H , Sarwar G , Antonio M , Sugerman CE , Mintz ED , Houpt ER , Verani JR , Widdowson MA , Tennant SM , Platts-Mills JA , Tate JE , Parashar UD , Kotloff KL . Clin Infect Dis 2023 76 S114-s122 |
| Differential neutralization and inhibition of SARS-CoV-2 variants by antibodies elicited by COVID-19 mRNA vaccines.
Wang L , Kainulainen MH , Jiang N , Di H , Bonenfant G , Mills L , Currier M , Shrivastava-Ranjan P , Calderon BM , Sheth M , Mann BR , Hossain J , Lin X , Lester S , Pusch EA , Jones J , Cui D , Chatterjee P , Jenks MH , Morantz EK , Larson GP , Hatta M , Harcourt JL , Tamin A , Li Y , Tao Y , Zhao K , Lacek K , Burroughs A , Wang W , Wilson M , Wong T , Park SH , Tong S , Barnes JR , Tenforde MW , Self WH , Shapiro NI , Exline MC , Files DC , Gibbs KW , Hager DN , Patel M , Halpin AL , McMullan LK , Lee JS , Xia H , Xie X , Shi PY , Davis CT , Spiropoulou CF , Thornburg NJ , Oberste MS , Dugan VG , Wentworth DE , Zhou B . Nat Commun 2022 13 (1) 4350
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| An Immunoinformatics Prediction of Novel Multi-Epitope Vaccines Candidate Against Surface Antigens of Nipah Virus.
Rahman MM , Puspo JA , Adib AA , Hossain ME , Alam MM , Sultana S , Islam A , Klena JD , Montgomery JM , Satter SM , Shirin T , Rahman MZ . Int J Pept Res Ther 2022 28 (4) 123
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| Coding-Complete Sequence of a SARS-CoV-2 B.1.1.25 Lineage Obtained from an 8-Day-Old Deceased Neonate.
Alam M , Jahan MI , Jahan S , Blau DM , Rahman A , Rahman MZ , Hossain MZ , Gurley ES , Arifeen SE , Rahman M . Microbiol Resour Announc 2021 10 (35) e0075621
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| SARS-CoV-2 spike D614G change enhances replication and transmission.
Zhou B , Thi Nhu Thao T , Hoffmann D , Taddeo A , Ebert N , Labroussaa F , Pohlmann A , King J , Steiner S , Kelly JN , Portmann J , Halwe NJ , Ulrich L , Trüeb BS , Fan X , Hoffmann B , Wang L , Thomann L , Lin X , Stalder H , Pozzi B , de Brot S , Jiang N , Cui D , Hossain J , Wilson M , Keller M , Stark TJ , Barnes JR , Dijkman R , Jores J , Benarafa C , Wentworth DE , Thiel V , Beer M . Nature 2021 592 (7852) 122-127
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| Characteristics of Salmonella recovered from stools of children enrolled in the Global Enteric Multicenter Study.
Kasumba IN , Pulford CV , Perez-Sepulveda BM , Sen S , Sayed N , Permala-Booth J , Livio S , Heavens D , Low R , Hall N , Roose A , Powell H , Farag T , Panchalingham S , Berkeley L , Nasrin D , Blackwelder WC , Wu Y , Tamboura B , Sanogo D , Onwuchekwa U , Sow SO , Ochieng JB , Omore R , Oundo JO , Breiman RF , Mintz ED , O'Reilly CE , Antonio M , Saha D , Hossain MJ , Mandomando I , Bassat Q , Alonso PL , Ramamurthy T , Sur D , Qureshi S , Zaidi AKM , Hossain A , Faruque ASG , Nataro JP , Kotloff KL , Levine MM , Hinton JCD , Tennant SM . Clin Infect Dis 2021 73 (4) 631-641
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| Hospital-based Surveillance for Pediatric Norovirus Gastroenteritis in Bangladesh, 2012-2016.
Satter SM , Abdullah Z , Cardemil CV , Flora MS , Gurley ES , Rahman M , Talha M , Islam MD , Hossain ME , Balachandran N , Lopman B , Rahman M , Vinjé J , Hall AJ , Parashar UD . Pediatr Infect Dis J 2020 40 (3) 215-219 |
| Genetic Diversity of Nipah virus in Bangladesh.
Rahman MZ , Islam MM , Hossain ME , Rahman MM , Islam A , Siddika A , Hossain MSS , Sultana S , Islam A , Rahman M , Rahman M , Klena JD , Flora MS , Daszak P , Epstein JH , Luby SP , Gurley ES . Int J Infect Dis 2020 102 144-151
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| The Clinical Presentation of Culture-positive and Culture-negative, Quantitative Polymerase Chain Reaction (qPCR)-Attributable Shigellosis in the Global Enteric Multicenter Study and Derivation of a Shigella Severity Score: Implications for Pediatric Shigella Vaccine Trials.
Pavlinac PB , Platts-Mills JA , Tickell KD , Liu J , Juma J , Kabir F , Nkeze J , Okoi C , Operario DJ , Uddin MJ , Ahmed S , Alonso PL , Antonio M , Becker SM , Breiman RF , Faruque ASG , Fields B , Gratz J , Haque R , Hossain A , Hossain MJ , Jarju S , Qamar F , Iqbal NT , Kwambana B , Mandomando I , McMurry TL , Ochieng C , Ochieng JB , Ochieng M , Onyango C , Panchalingam S , Kalam A , Aziz F , Qureshi S , Ramamurthy T , Roberts JH , Saha D , Sow SO , Stroup SE , Sur D , Tamboura B , Taniuchi M , Tennant SM , Roose A , Toema D , Wu Y , Zaidi A , Nataro JP , Levine MM , Houpt ER , Kotloff KL . Clin Infect Dis 2020 73 (3) e569-e579 |
| Outbreak of diarrhoea in piglets caused by novel rotavirus genotype G4P[49] in north-western district of Bangladesh, February 2014.
Sarkar S , Dioh Esona M , Gautam R , Castro CJ , Ng TFF , Haque W , Khan SU , Hossain ME , Rahman MZ , Gurley ES , Kennedy ED , Bowen MD , Parashar UD , Rahman M . Transbound Emerg Dis 2019 67 (1) 442-449
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| Detection of highly pathogenic avian influenza A(H5N6) viruses in waterfowl in Bangladesh.
Yang G , Chowdury S , Hodges E , Rahman MZ , Jang Y , Hossain ME , Jones J , Stark TJ , Di H , Cook PW , Ghosh S , Azziz-Baumgartner E , Barnes JR , Wentworth DE , Kennedy E , Davis CT . Virology 2019 534 36-44
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| Colonization factors among enterotoxigenic Escherichia coli isolates from children with moderate-to-severe diarrhea and from matched controls in the Global Enteric Multicenter Study (GEMS).
Vidal RM , Muhsen K , Tennant SM , Svennerholm AM , Sow SO , Sur D , Zaidi AKM , Faruque ASG , Saha D , Adegbola R , Hossain MJ , Alonso PL , Breiman RF , Bassat Q , Tamboura B , Sanogo D , Onwuchekwa U , Manna B , Ramamurthy T , Kanungo S , Ahmed S , Qureshi S , Quadri F , Hossain A , Das SK , Antonio M , Mandomando I , Nhampossa T , Acacio S , Omore R , Ochieng JB , Oundo JO , Mintz ED , O'Reilly CE , Berkeley LY , Livio S , Panchalingam S , Nasrin D , Farag TH , Wu Y , Sommerfelt H , Robins-Browne RM , Del Canto F , Hazen TH , Rasko DA , Kotloff KL , Nataro JP , Levine MM . PLoS Negl Trop Dis 2019 13 (1) e0007037 |
| Sputum smear microscopy in the Xpert ® MTB/RIF era.
Van Deun A , Tahseen S , Affolabi D , Hossain MA , Joloba ML , Angra PK , Ridderhof JC , de Jong BC , Rieder HL . Int J Tuberc Lung Dis 2018 23 (1) 12-18 |
| Epidemiologic and Genotypic distribution of Noroviruses among children with Acute Diarrhea and Healthy Controls in a Low-income Rural Setting.
Hossain ME , Rahman R , Ali SI , Islam MM , Rahman MZ , Ahmed S , Faruque ASG , Barclay L , Vinje J , Rahman M . Clin Infect Dis 2018 69 (3) 505-513 |
| Genetic diversity of noroviruses circulating in a pediatric cohort in Bangladesh.
Nelson MI , Mahfuz M , Chhabra P , Haque R , Seidman JC , Hossain I , McGrath M , Ahmed AMS , Knobler S , Vinje J , Ahmed T . J Infect Dis 2018 218 (12) 1937-1942
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| Risk Factors Associated with Blood Exposure for Sporadic Hepatitis E in Dhaka, Bangladesh.
Sazzad HMS , Luby SP , Labrique AB , Kamili S , Hayden TM , Kamili NA , Teo CG , Gurley ES . Am J Trop Med Hyg 2017 97 (5) 1437-1444 |
| Colonization Density of the Upper Respiratory Tract as a Predictor of Pneumonia-Haemophilus influenzae, Moraxella catarrhalis, Staphylococcus aureus, and Pneumocystis jirovecii.
Park DE , Baggett HC , Howie SRC , Shi Q , Watson NL , Brooks WA , Deloria Knoll M , Hammitt LL , Kotloff KL , Levine OS , Madhi SA , Murdoch DR , O'Brien KL , Scott JAG , Thea DM , Ahmed D , Antonio M , Baillie VL , DeLuca AN , Driscoll AJ , Fu W , Gitahi CW , Olutunde E , Higdon MM , Hossain L , Karron RA , Maiga AA , Maloney SA , Moore DP , Morpeth SC , Mwaba J , Mwenechanya M , Prosperi C , Sylla M , Thamthitiwat S , Zeger SL , Feikin DR . Clin Infect Dis 2017 64 S328-s336 |
| Limited Utility of Polymerase Chain Reaction in Induced Sputum Specimens for Determining the Causes of Childhood Pneumonia in Resource-Poor Settings: Findings From the Pneumonia Etiology Research for Child Health (PERCH) Study.
Thea DM , Seidenberg P , Park DE , Mwananyanda L , Fu W , Shi Q , Baggett HC , Brooks WA , Feikin DR , Howie SRC , Knoll MD , Kotloff KL , Levine OS , Madhi SA , O'Brien KL , Scott JAG , Antonio M , Awori JO , Baillie VL , DeLuca AN , Driscoll AJ , Higdon MM , Hossain L , Jahan Y , Karron RA , Kazungu S , Li M , Moore DP , Morpeth SC , Ofordile O , Prosperi C , Sangwichian O , Sawatwong P , Sylla M , Tapia MD , Zeger SL , Murdoch DR , Hammitt LL . Clin Infect Dis 2017 64 S289-s300 |
| Use of quantitative molecular diagnostic methods to identify causes of diarrhoea in children: a reanalysis of the GEMS case-control study.
Liu J , Platts-Mills JA , Juma J , Kabir F , Nkeze J , Okoi C , Operario DJ , Uddin J , Ahmed S , Alonso PL , Antonio M , Becker SM , Blackwelder WC , Breiman RF , Faruque AS , Fields B , Gratz J , Haque R , Hossain A , Hossain MJ , Jarju S , Qamar F , Iqbal NT , Kwambana B , Mandomando I , McMurry TL , Ochieng C , Ochieng JB , Ochieng M , Onyango C , Panchalingam S , Kalam A , Aziz F , Qureshi S , Ramamurthy T , Roberts JH , Saha D , Sow SO , Stroup SE , Sur D , Tamboura B , Taniuchi M , Tennant SM , Toema D , Wu Y , Zaidi A , Nataro JP , Kotloff KL , Levine MM , Houpt ER . Lancet 2016 388 (10051) 1291-301 |
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