CDC-Authored Genomics and Precision Health Publications Database

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Last data update: Jan 13, 2025. (Total: 6490 publications)

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Records 1-30 (of 43 Records)

Query Trace: Hall AJ[original query]
Traceback and testing of food epidemiologically linked to a norovirus outbreak at a wedding reception Papafragkou E , Kita-Yarbro A , Yang Z , Chhabra P , Davis T , Blackmore J , Ziemer C , Klos R , Hall AJ , Vinjé J . J Food Prot 2024 100395
Genomic surveillance for SARS-CoV-2 variants: Circulation of Omicron XBB and JN.1 lineages - United States, May 2023-September 2024 Ma KC , Castro J , Lambrou AS , Rose EB , Cook PW , Batra D , Cubenas C , Hughes LJ , MacCannell DR , Mandal P , Mittal N , Sheth M , Smith C , Winn A , Hall AJ , Wentworth DE , Silk BJ , Thornburg NJ , Paden CR . MMWR Morb Mortal Wkly Rep 2024 73 (42) 938-945
Who gets sick from COVID-19? Sociodemographic correlates of severe adult health outcomes during Alpha- and Delta-variant predominant periods, 9/2020-11/2021 Wei SC , Freeman D , Himschoot A , Clarke KEN , Van Dyke ME , Adjemian J , Ahmad FB , Benoit TJ , Berney K , Gundlapalli AV , Hall AJ , Havers F , Henley SJ , Hilton C , Johns D , Opsomer JD , Pham HT , Stuckey MJ , Taylor CA , Jones JM . J Infect Dis 2024 229 (1) 122-132
Pregnancy and infant outcomes following SARS-CoV-2 infection in pregnancy during Delta variant predominance - surveillance for emerging threats to pregnant people and infants: Pregnancy and infant outcomes during SARS-CoV-2 Delta variant predominance Reeves EL , Neelam V , Carlson JM , Olsen EO , Fox CJ , Woodworth KR , Nestoridi E , Mobley E , Montero Castro S , Dzimira P , Sokale A , Sizemore L , Hall AJ , Ellington S , Cohn A , Gilboa SM , Tong VT . Am J Obstet Gynecol MFM 2023 6 (2) 101265
Early detection and surveillance of the SARS-CoV-2 variant BA.2.86 - Worldwide, July-October 2023 Lambrou AS , South E , Ballou ES , Paden CR , Fuller JA , Bart SM , Butryn DM , Novak RT , Browning SD , Kirby AE , Welsh RM , Cornforth DM , MacCannell DR , Friedman CR , Thornburg NJ , Hall AJ , Hughes LJ , Mahon BE , Daskalakis DC , Shah ND , Jackson BR , Kirking HL . MMWR Morb Mortal Wkly Rep 2023 72 (43) 1162-1167
Epidemiology and risk factors of norovirus infections among diarrhea patients admitted to tertiary care hospitals in Bangladesh Satter SM , Abdullah Z , Fariha F , Karim Y , Rahman MM , Balachandran N , Ghosh PK , Hossain ME , Mirza SA , Hall AJ , Gastañaduy PA , Rahman M , Vinjé J , Parashar UD . J Infect Dis 2023 228 (7) 818-828
Genomic surveillance for SARS-CoV-2 variants: Circulation of Omicron lineages - United States, January 2022-May 2023 Ma KC , Shirk P , Lambrou AS , Hassell N , Zheng XY , Payne AB , Ali AR , Batra D , Caravas J , Chau R , Cook PW , Howard D , Kovacs NA , Lacek KA , Lee JS , MacCannell DR , Malapati L , Mathew S , Mittal N , Nagilla RR , Parikh R , Paul P , Rambo-Martin BL , Shepard SS , Sheth M , Wentworth DE , Winn A , Hall AJ , Silk BJ , Thornburg N , Kondor R , Scobie HM , Paden CR . MMWR Morb Mortal Wkly Rep 2023 72 (24) 651-656
SARS-CoV-2 During Omicron Variant Predominance Among Infants Born to People With SARS-CoV-2. Gosdin L , Chang D , Olsen EO , Lewis EL , Wingate H , Ojo KD , Shephard H , Sokale A , Mobley EL , Delgado-López C , Hall AJ , Gilboa SM , Tong VT , Woodworth KR . Pediatrics 2023 151 (5)
COVID-19-Associated Hospitalizations Among Vaccinated and Unvaccinated Adults 18 Years or Older in 13 US States, January 2021 to April 2022. Havers FP , Pham H , Taylor CA , Whitaker M , Patel K , Anglin O , Kambhampati AK , Milucky J , Zell E , Moline HL , Chai SJ , Kirley PD , Alden NB , Armistead I , Yousey-Hindes K , Meek J , Openo KP , Anderson EJ , Reeg L , Kohrman A , Lynfield R , Como-Sabetti K , Davis EM , Cline C , Muse A , Barney G , Bushey S , Felsen CB , Billing LM , Shiltz E , Sutton M , Abdullah N , Talbot HK , Schaffner W , Hill M , George A , Hall AJ , Bialek SR , Murthy NC , Murthy BP , McMorrow M . JAMA Intern Med 2022 182 (10) 1071-1081
A Case Series of Children with Acute Hepatitis and Human Adenovirus Infection. GutierrezSanchez LH , Shiau H , Baker JM , Saaybi S , Buchfellner M , Britt W , Sanchez V , Potter JL , Ingram LA , Kelly D , Lu X , Ayers-Millsap S , Willeford WG , Rassaei N , Bhatnagar J , Bullock H , Reagan-Steiner S , Martin A , Rogers ME , Banc-Husu AM , Harpavat S , Leung DH , Moulton EA , Lamson DM , StGeorge K , Hall AJ , Parashar U , MacNeil A , Tate JE , Kirking HL . N Engl J Med 2022 387 (7) 620-630
Association of Secretor Status and Recent Norovirus Infection With Gut Microbiome Diversity Metrics in a Veterans Affairs Population. Johnson JA , Read TD , Petit RA3rd , Marconi VC , Meagley KL , Rodriguez-Barradas MC , Beenhouwer DO , Brown ST , Holodniy M , Lucero-Obusan CA , Schirmer P , Ingersoll JM , Kraft CS , Neill FH , Atmar RL , Kambhampati AK , Cates JE , Mirza SA , Hall AJ , Cardemil CV , Lopman BA . Open Forum Infect Dis 2022 9 (5) ofac125
Study protocol for the Innovative Support for Patients with SARS-COV-2 Infections Registry (INSPIRE): A longitudinal study of the medium and long-term sequelae of SARS-CoV-2 infection. O'Laughlin KN , Thompson M , Hota B , Gottlieb M , Plumb ID , Chang AM , Wisk LE , Hall AJ , Wang RC , Spatz ES , Stephens KA , Huebinger RM , McDonald SA , Venkatesh A , Gentile N , Slovis BH , Hill M , Saydah S , Idris AH , Rodriguez R , Krumholz HM , Elmore JG , Weinstein RA , Nichol G . PLoS One 2022 17 (3) e0264260
Comparative Effectiveness and Antibody Responses to Moderna and Pfizer-BioNTech COVID-19 Vaccines among Hospitalized Veterans - Five Veterans Affairs Medical Centers, United States, February 1-September 30, 2021. Bajema KL , Dahl RM , Evener SL , Prill MM , Rodriguez-Barradas MC , Marconi VC , Beenhouwer DO , Holodniy M , Lucero-Obusan C , Brown ST , Tremarelli M , Epperson M , Mills L , Park SH , Rivera-Dominguez G , Morones RG , Ahmadi-Izadi G , Deovic R , Mendoza C , Jeong C , Schrag SJ , Meites E , Hall AJ , Kobayashi M , McMorrow M , Verani JR , Thornburg NJ , Surie D . MMWR Morb Mortal Wkly Rep 2021 70 (49) 1700-1705
Effectiveness of COVID-19 mRNA Vaccines Against COVID-19-Associated Hospitalization - Five Veterans Affairs Medical Centers, United States, February 1-August 6, 2021. Bajema KL , Dahl RM , Prill MM , Meites E , Rodriguez-Barradas MC , Marconi VC , Beenhouwer DO , Brown ST , Holodniy M , Lucero-Obusan C , Rivera-Dominguez G , Morones RG , Whitmire A , Goldin EB , Evener SL , Tremarelli M , Tong S , Hall AJ , Schrag SJ , McMorrow M , Kobayashi M , Verani JR , Surie D . MMWR Morb Mortal Wkly Rep 2021 70 (37) 1294-1299
Estimating Under-recognized COVID-19 Deaths, United States, March 2020-May 2021 using an Excess Mortality Modelling Approach. Iuliano AD , Chang HH , Patel NN , Threlkel R , Kniss K , Reich J , Steele M , Hall AJ , Fry AM , Reed C . Lancet Reg Health Am 2021 1 100019
Detection of SARS-CoV-2 on Surfaces in Households of Persons with COVID-19. Marcenac P , Park GW , Duca LM , Lewis NM , Dietrich EA , Barclay L , Tamin A , Harcourt JL , Thornburg NJ , Rispens J , Matanock A , Kiphibane T , Christensen K , Pawloski LC , Fry AM , Hall AJ , Tate JE , Vinjé J , Kirking HL , Pevzner E . Int J Environ Res Public Health 2021 18 (15)
SARS-CoV-2 transmission in a Georgia school district - United States, December 2020-January 2021. Gettings JR , Gold JAW , Kimball A , Forsberg K , Scott C , Uehara A , Tong S , Hast M , Swanson MR , Morris E , Oraka E , Almendares O , Thomas ES , Mehari L , McCloud J , Roberts G , Crosby D , Balajee A , Burnett E , Chancey RJ , Cook P , Donadel M , Espinosa C , Evans ME , Fleming-Dutra KE , Forero C , Kukielka EA , Li Y , Marcet PL , Mitruka K , Nakayama JY , Nakazawa Y , O'Hegarty M , Pratt C , Rice ME , Rodriguez Stewart RM , Sabogal R , Sanchez E , Velasco-Villa A , Weng MK , Zhang J , Rivera G , Parrott T , Franklin R , Memark J , Drenzek C , Hall AJ , Kirking HL , Tate JE , Vallabhaneni S . Clin Infect Dis 2021 74 (2) 319-326
Pediatric Respiratory and Enteric Virus Acquisition and Immunogenesis in US Mothers and Children Aged 0-2: PREVAIL Cohort Study. Morrow AL , Staat MA , DeFranco EA , McNeal MM , Cline AR , Conrey SC , Schlaudecker EP , Piasecki AM , Burke RM , Niu L , Hall AJ , Bowen MD , Gerber SI , Langley GE , Thornburg NJ , Campbell AP , Vinjé J , Parashar UD , Payne DC . JMIR Res Protoc 2021 10 (2) e22222
Hospital-based Surveillance for Pediatric Norovirus Gastroenteritis in Bangladesh, 2012-2016. Satter SM , Abdullah Z , Cardemil CV , Flora MS , Gurley ES , Rahman M , Talha M , Islam MD , Hossain ME , Balachandran N , Lopman B , Rahman M , Vinjé J , Hall AJ , Parashar UD . Pediatr Infect Dis J 2020 40 (3) 215-219
Identifying septic pollution exposure routes during a waterborne norovirus outbreak - A new application for human-associated microbial source tracking qPCR. Mattioli MC , Benedict KM , Murphy J , Kahler A , Kline KE , Longenberger A , Mitchell PK , Watkins S , Berger P , Shanks OC , Barrett CE , Barclay L , Hall AJ , Hill V , Weltman A . J Microbiol Methods 2020 180 106091
Characteristics of GII.4 Norovirus versus other Genotypes in Sporadic Pediatric Infections in Davidson County, Tennessee, USA. Haddadin Z , Batarseh E , Hamdan L , Stewart LS , Piya B , Rahman H , Spieker AJ , Chappell J , Wikswo ME , Dunn JR , Payne DC , Vinje J , Hall AJ , Halasa N . Clin Infect Dis 2020 73 (7) e1525-e1531
Incidence, etiology, and severity of acute gastroenteritis among prospectively enrolled patients in 4 Veterans Affairs hospitals and outpatient centers, 2016-18. Cardemil CV , Balachandran N , Kambhampati A , Grytdal S , Dahl RM , Rodriguez-Barradas MC , Vargas B , Beenhouwer DO , Evangelista KV , Marconi VC , Meagley KL , Brown ST , Perea A , Lucero-Obusan C , Holodniy M , Browne H , Gautam R , Bowen MD , Vinje J , Parashar UD , Hall AJ . Clin Infect Dis 2020 73 (9) e2729-e2738
Recent advances in human norovirus research and implications for candidate vaccines. Cates J , Vinje J , Parashar U , Hall AJ . Expert Rev Vaccines 2020 19 (6) 539-548
Temporal and Genotypic Associations of Sporadic Norovirus Gastroenteritis and Reported Norovirus Outbreaks in Middle Tennessee, 2012-2016. Parikh MP , Vandekar S , Moore C , Thomas L , Britt N , Piya B , Stewart LS , Batarseh E , Hamdan L , Cavallo SJ , Swing AM , Garman KN , Constantine-Renna L , Chappell J , Payne DC , Vinje J , Hall AJ , Dunn JR , Halasa N . Clin Infect Dis 2019 71 (9) 2398-2404
Emerging Novel GII.P16 Noroviruses Associated with Multiple Capsid Genotypes. Barclay L , Cannon JL , Wikswo ME , Phillips AR , Browne H , Montmayeur AM , Tatusov RL , Burke RM , Hall AJ , Vinje J . Viruses 2019 11 (6)
Active Surveillance for Norovirus in a US Veterans Affairs Patient Population, Houston, Texas, 2015-2016. Kambhampati AK , Vargas B , Mushtaq M , Browne H , Grytdal S , Atmar RL , Vinje J , Parashar UD , Lopman B , Hall AJ , Rodriguez-Barradas MC , Cardemil CV . Open Forum Infect Dis 2019 6 (4) ofz115
Progress on Norovirus vaccine research: Public health considerations and future directions. Mattison CP , Cardemil CV , Hall AJ . Expert Rev Vaccines 2018 17 (9) 773-784
Zoonotic origin and transmission of Middle East respiratory syndrome coronavirus in the UAE. Paden CR , Yusof MFBM , Al Hammadi ZM , Queen K , Tao Y , Eltahir YM , Elsayed EA , Marzoug BA , Bensalah OKA , Khalafalla AI , Al Mulla M , Elkheir KA , Issa ZB , Pradeep K , Elsaleh FN , Imambaccus H , Sasse J , Weber S , Shi M , Zhang J , Li Y , Pham H , Kim L , Hall AJ , Gerber SI , Al Hosani FI , Tong S , Al Muhairi SSM . Zoonoses Public Health 2017 65 (3) 322-333
Diversity of Middle East respiratory syndrome coronaviruses in 109 dromedary camels based on full-genome sequencing, Abu Dhabi, United Arab Emirates. Yusof MF , Queen K , Eltahir YM , Paden CR , Al Hammadi Zmah , Tao Y , Li Y , Khalafalla AI , Shi M , Zhang J , Mohamed Msae , Abd Elaal Ahmed MH , Azeez IA , Bensalah OK , Eldahab ZS , Al Hosani FI , Gerber SI , Hall AJ , Tong S , Al Muhairi SS . Emerg Microbes Infect 2017 6 (11) e101
Identification of diverse viruses in upper respiratory samples in dromedary camels from United Arab Emirates. Li Y , Khalafalla AI , Paden CR , Yusof MF , Eltahir YM , Al Hammadi ZM , Tao Y , Queen K , Hosani FA , Gerber SI , Hall AJ , Al Muhairi S , Tong S . PLoS One 2017 12 (9) e0184718