CDC-Authored Genomics and Precision Health Publications Database
Last data update: Jan 13, 2025. (Total: 6490 publications)
| Query Trace: Gary J[original query] |
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| Paternal genetic variants and risk of obstructive heart defects: A parent-of-origin approach.
Patel J , Bircan E , Tang X , Orloff M , Hobbs CA , Browne ML , Botto LD , Finnell RH , Jenkins MM , Olshan A , Romitti PA , Shaw GM , Werler MM , Li J , Nembhard WN . PLoS Genet 2021 17 (3) e1009413 |
| Performance evaluation of fungal DNA PCR amplification from formalin-fixed paraffin-embedded tissue for diagnosis; experience of a tertiary reference laboratory.
Lysen C , Silva-Flannery L , Zaki SR , Gary JM , Lockhart SR . Mycoses 2021 64 (6) 603-611 
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| Evidence of SARS-CoV-2 Replication and Tropism in the Lungs, Airways and Vascular Endothelium of Patients with Fatal COVID-19: An Autopsy Case-Series.
Bhatnagar J , Gary J , Reagan-Steiner S , Estetter LB , Tong S , Tao Y , Denison AM , Lee E , DeLeon-Carnes M , Li Y , Uehara A , Paden CR , Leitgeb B , Uyeki TM , Martines RB , Ritter JM , Paddock CD , Shieh WJ , Zaki SR . J Infect Dis 2021 223 (5) 752-764
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| A new genetic approach to distinguish strains of Anaplasma phagocytophilum that appear not to cause human disease.
Liveris D , Aguero-Rosenfeld ME , Daniels TJ , Karpathy S , Paddock C , Adish S , Keesing F , Ostfeld RS , Wormser GP , Schwartz I . Ticks Tick Borne Dis 2021 12 (3) 101659
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| Physicochemical characterization and genotoxicity of the broad class of carbon nanotubes and nanofibers used or produced in U.S. facilities.
Fraser K , Kodali V , Yanamala N , Birch ME , Cena L , Casuccio G , Bunker K , Lersch TL , Evans DE , Stefaniak A , Hammer MA , Kashon ML , Boots T , Eye T , Hubczak J , Friend SA , Dahm M , Schubauer-Berigan MK , Siegrist K , Lowry D , Bauer AK , Sargent LM , Erdely A . Part Fibre Toxicol 2020 17 (1) 62 |
| Appendix Q: Recommendations for Developing Molecular Assays for Microbial Pathogen Detection Using Modern In Silico Approaches.
SantaLucia J , Sozhamannan S , Gans JD , Koehler JW , Soong R , Lin NJ , Xie G , Olson V , Roth K , Beck L . J AOAC Int 2020 103 (4) 882-899
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| 2020 taxonomic update for phylum Negarnaviricota (Riboviria: Orthornavirae), including the large orders Bunyavirales and Mononegavirales.
Kuhn JH , Adkins S , Alioto D , Alkhovsky SV , Amarasinghe GK , Anthony SJ , Avšič-Županc T , Ayllón MA , Bahl J , Balkema-Buschmann A , Ballinger MJ , Bartonička T , Basler C , Bavari S , Beer M , Bente DA , Bergeron É , Bird BH , Blair C , Blasdell KR , Bradfute SB , Breyta R , Briese T , Brown PA , Buchholz UJ , Buchmeier MJ , Bukreyev A , Burt F , Buzkan N , Calisher CH , Cao M , Casas I , Chamberlain J , Chandran K , Charrel RN , Chen B , Chiumenti M , Choi IR , Clegg JCS , Crozier I , da Graça JV , Dal Bó E , Dávila AMR , de la Torre JC , de Lamballerie X , de Swart RL , Di Bello PL , Di Paola N , Di Serio F , Dietzgen RG , Digiaro M , Dolja VV , Dolnik O , Drebot MA , Drexler JF , Dürrwald R , Dufkova L , Dundon WG , Duprex WP , Dye JM , Easton AJ , Ebihara H , Elbeaino T , Ergünay K , Fernandes J , Fooks AR , Formenty PBH , Forth LF , Fouchier RAM , Freitas-Astúa J , Gago-Zachert S , Gāo GF , García ML , García-Sastre A , Garrison AR , Gbakima A , Goldstein T , Gonzalez JJ , Griffiths A , Groschup MH , Günther S , Guterres A , Hall RA , Hammond J , Hassan M , Hepojoki J , Hepojoki S , Hetzel U , Hewson R , Hoffmann B , Hongo S , Höper D , Horie M , Hughes HR , Hyndman TH , Jambai A , Jardim R , Jiāng D , Jin Q , Jonson GB , Junglen S , Karadağ S , Keller KE , Klempa B , Klingström J , Kobinger G , Kondō H , Koonin EV , Krupovic M , Kurath G , Kuzmin IV , Laenen L , Lamb RA , Lambert AJ , Langevin SL , Lee B , Lemos ERS , Leroy EM , Li D , Lǐ J , Liang M , Liú W , Liú Y , Lukashevich IS , Maes P , Marciel de Souza W , Marklewitz M , Marshall SH , Martelli GP , Martin RR , Marzano SL , Massart S , McCauley JW , Mielke-Ehret N , Minafra A , Minutolo M , Mirazimi A , Mühlbach HP , Mühlberger E , Naidu R , Natsuaki T , Navarro B , Navarro JA , Netesov SV , Neumann G , Nowotny N , Nunes MRT , Nylund A , Økland AL , Oliveira RC , Palacios G , Pallas V , Pályi B , Papa A , Parrish CR , Pauvolid-Corrêa A , Pawęska JT , Payne S , Pérez DR , Pfaff F , Radoshitzky SR , Rahman AU , Ramos-González PL , Resende RO , Reyes CA , Rima BK , Romanowski V , Robles Luna G , Rota P , Rubbenstroth D , Runstadler JA , Ruzek D , Sabanadzovic S , Salát J , Sall AA , Salvato MS , Sarpkaya K , Sasaya T , Schwemmle M , Shabbir MZ , Shí X , Shí Z , Shirako Y , Simmonds P , Širmarová J , Sironi M , Smither S , Smura T , Song JW , Spann KM , Spengler JR , Stenglein MD , Stone DM , Straková P , Takada A , Tesh RB , Thornburg NJ , Tomonaga K , Tordo N , Towner JS , Turina M , Tzanetakis I , Ulrich RG , Vaira AM , van den Hoogen B , Varsani A , Vasilakis N , Verbeek M , Wahl V , Walker PJ , Wang H , Wang J , Wang X , Wang LF , Wèi T , Wells H , Whitfield AE , Williams JV , Wolf YI , Wú Z , Yang X , Yáng X , Yu X , Yutin N , Zerbini FM , Zhang T , Zhang YZ , Zhou G , Zhou X . Arch Virol 2020 165 (12) 3023-3072 |
| Rapid, Noninvasive Diagnosis of Balamuthia mandrillaris Encephalitis by a Plasma-Based Next-Generation Sequencing Test.
Kalyatanda G , Rand K , Lindner MS , Hong DK , Sait Albayram M , Gregory J , Kresak J , Ibne KMA , Cope JR , Roy S , Gary JM , Reddy V , Ahmed AA . Open Forum Infect Dis 2020 7 (7) ofaa189
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| Dioxin-like compound exposures and DNA methylation in the Anniston Community Health Survey Phase II.
Pittman GS , Wang X , Campbell MR , Coulter SJ , Olson JR , Pavuk M , Birnbaum LS , Bell DA . Sci Total Environ 2020 742 140424 |
| Characterization of a Borrelia miyamotoi membrane antigen (BmaA) for serodiagnosis of Borrelia miyamotoi disease.
Harris EK , Brandt KS , Van Gundy TJ , Goodrich I , Wormser GP , Armstrong BA , Gilmore RD . Ticks Tick Borne Dis 2020 11 (5) 101476 |
| Public Health Responses to COVID-19 Outbreaks on Cruise Ships - Worldwide, February-March 2020.
Moriarty LF , Plucinski MM , Marston BJ , Kurbatova EV , Knust B , Murray EL , Pesik N , Rose D , Fitter D , Kobayashi M , Toda M , Canty PT , Scheuer T , Halsey ES , Cohen NJ , Stockman L , Wadford DA , Medley AM , Green G , Regan JJ , Tardivel K , White S , Brown C , Morales C , Yen C , Wittry B , Freeland A , Naramore S , Novak RT , Daigle D , Weinberg M , Acosta A , Herzig C , Kapella BK , Jacobson KR , Lamba K , Ishizumi A , Sarisky J , Svendsen E , Blocher T , Wu C , Charles J , Wagner R , Stewart A , Mead PS , Kurylo E , Campbell S , Murray R , Weidle P , Cetron M , Friedman CR . MMWR Morb Mortal Wkly Rep 2020 69 (12) 347-352
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| Bloodstream Infections with a Novel Nontuberculous Mycobacterium Involving 52 Outpatient Oncology Clinic Patients - Arkansas, 2018.
Labuda SM , Garner K , Cima M , Moulton-Meissner H , Laufer Halpin A , Charles-Toney N , Yu P , Bolton E , Pierce R , Crist MB , Gomes D , Gable P , McAllister G , Lawsin A , Houston H , Patil N , Wheeler JG , Bradsher R , Vyas K , Haselow D . Clin Infect Dis 2019 71 (7) e178-e185
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| Recurrent herpes zoster in the Shingles Prevention Study: Are second episodes caused by the same varicella-zoster virus strain?
Harbecke R , Jensen NJ , Depledge DP , Johnson GR , Ashbaugh ME , Schmid DS , Breuer J , Levin MJ , Oxman MN . Vaccine 2019 38 (2) 150-157
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| Exome sequencing of family trios from the National Birth Defects Prevention Study: Tapping into a rich resource of genetic and environmental data.
Jenkins MM , Almli LM , Pangilinan F , Chong JX , Blue EE , Shapira SK , White J , McGoldrick D , Smith JD , Mullikin JC , Bean CJ , Nembhard WN , Lou XY , Shaw GM , Romitti PA , Keppler-Noreuil K , Yazdy MM , Kay DM , Carter TC , Olshan AF , Moore KJ , Nascone-Yoder N , Finnell RH , Lupo PJ , Feldkamp ML , Nickerson DA , Bamshad MJ , Brody LC , Reefhuis J . Birth Defects Res 2019 111 (20) 1618-1632 |
| Taxonomy of the order Mononegavirales: update 2019.
Amarasinghe GK , Ayllon MA , Bao Y , Basler CF , Bavari S , Blasdell KR , Briese T , Brown PA , Bukreyev A , Balkema-Buschmann A , Buchholz UJ , Chabi-Jesus C , Chandran K , Chiapponi C , Crozier I , de Swart RL , Dietzgen RG , Dolnik O , Drexler JF , Durrwald R , Dundon WG , Duprex WP , Dye JM , Easton AJ , Fooks AR , Formenty PBH , Fouchier RAM , Freitas-Astua J , Griffiths A , Hewson R , Horie M , Hyndman TH , Jiang D , Kitajima EW , Kobinger GP , Kondo H , Kurath G , Kuzmin IV , Lamb RA , Lavazza A , Lee B , Lelli D , Leroy EM , Li J , Maes P , Marzano SL , Moreno A , Muhlberger E , Netesov SV , Nowotny N , Nylund A , Okland AL , Palacios G , Palyi B , Paweska JT , Payne SL , Prosperi A , Ramos-Gonzalez PL , Rima BK , Rota P , Rubbenstroth D , Shi M , Simmonds P , Smither SJ , Sozzi E , Spann K , Stenglein MD , Stone DM , Takada A , Tesh RB , Tomonaga K , Tordo N , Towner JS , van den Hoogen B , Vasilakis N , Wahl V , Walker PJ , Wang LF , Whitfield AE , Williams JV , Zerbini FM , Zhang T , Zhang YZ , Kuhn JH . Arch Virol 2019 164 (7) 1967-1980 |
| New filovirus disease classification and nomenclature.
Kuhn JH , Adachi T , Adhikari NKJ , Arribas JR , Bah IE , Bausch DG , Bhadelia N , Borchert M , Brantsaeter AB , Brett-Major DM , Burgess TH , Chertow DS , Chute CG , Cieslak TJ , Colebunders R , Crozier I , Davey RT , de Clerck H , Delgado R , Evans L , Fallah M , Fischer WA 2nd , Fletcher TE , Fowler RA , Grunewald T , Hall A , Hewlett A , Hoepelman AIM , Houlihan CF , Ippolito G , Jacob ST , Jacobs M , Jakob R , Jacquerioz FA , Kaiser L , Kalil AC , Kamara RF , Kapetshi J , Klenk HD , Kobinger G , Kortepeter MG , Kraft CS , Kratz T , Bosa HSK , Lado M , Lamontagne F , Lane HC , Lobel L , Lutwama J , Lyon GM 3rd , Massaquoi MBF , Massaquoi TA , Mehta AK , Makuma VM , Murthy S , Musoke TS , Muyembe-Tamfum JJ , Nakyeyune P , Nanclares C , Nanyunja M , Nsio-Mbeta J , O'Dempsey T , Paweska JT , Peters CJ , Piot P , Rapp C , Renaud B , Ribner B , Sabeti PC , Schieffelin JS , Slenczka W , Soka MJ , Sprecher A , Strong J , Swanepoel R , Uyeki TM , van Herp M , Vetter P , Wohl DA , Wolf T , Wolz A , Wurie AH , Yoti Z . Nat Rev Microbiol 2019 17 (5) 261-263
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| Translocation of a Stray Cat Infected with Rabies from North Carolina to a Terrestrial Rabies-Free County in Ohio, 2017.
Singh AJ , Chipman RB , de Fijter S , Gary R , Haskell MG , Kirby J , Yu L , Condori RE , Orciari L , Wallace R . MMWR Morb Mortal Wkly Rep 2018 67 (42) 1174-1177
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| Comprehensive viral enrichment enables sensitive respiratory virus genomic identification and analysis by next generation sequencing.
O'Flaherty BM , Li Y , Tao Y , Paden CR , Queen K , Zhang J , Dinwiddie DL , Gross SM , Schroth GP , Tong S . Genome Res 2018 28 (6) 869-877
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| Taxonomy of the order Mononegavirales: update 2018.
Amarasinghe GK , Arechiga Ceballos NG , Banyard AC , Basler CF , Bavari S , Bennett AJ , Blasdell KR , Briese T , Bukreyev A , Cai Y , Calisher CH , Campos Lawson C , Chandran K , Chapman CA , Chiu CY , Choi KS , Collins PL , Dietzgen RG , Dolja VV , Dolnik O , Domier LL , Durrwald R , Dye JM , Easton AJ , Ebihara H , Echevarria JE , Fooks AR , Formenty PBH , Fouchier RAM , Freuling CM , Ghedin E , Goldberg TL , Hewson R , Horie M , Hyndman TH , Jiang D , Kityo R , Kobinger GP , Kondo H , Koonin EV , Krupovic M , Kurath G , Lamb RA , Lee B , Leroy EM , Maes P , Maisner A , Marston DA , Mor SK , Muller T , Muhlberger E , Ramirez VMN , Netesov SV , Ng TFF , Nowotny N , Palacios G , Patterson JL , Paweska JT , Payne SL , Prieto K , Rima BK , Rota P , Rubbenstroth D , Schwemmle M , Siddell S , Smither SJ , Song Q , Song T , Stenglein MD , Stone DM , Takada A , Tesh RB , Thomazelli LM , Tomonaga K , Tordo N , Towner JS , Vasilakis N , Vazquez-Moron S , Verdugo C , Volchkov VE , Wahl V , Walker PJ , Wang D , Wang LF , Wellehan JFX , Wiley MR , Whitfield AE , Wolf YI , Ye G , Zhang YZ , Kuhn JH . Arch Virol 2018 163 (8) 2283-2294 |
| Metabolic differentiation of early Lyme disease from southern tick-associated rash illness (STARI).
Molins CR , Ashton LV , Wormser GP , Andre BG , Hess AM , Delorey MJ , Pilgard MA , Johnson BJ , Webb K , Islam MN , Pegalajar-Jurado A , Molla I , Jewett MW , Belisle JT . Sci Transl Med 2017 9 (403) |
| SNVPhyl: a single nucleotide variant phylogenomics pipeline for microbial genomic epidemiology.
Petkau A , Mabon P , Sieffert C , Knox NC , Cabral J , Iskander M , Weedmark K , Zaheer R , Katz LS , Nadon C , Reimer A , Taboada E , Beiko RG , Hsiao W , Brinkman F , Graham M , Van Domselaar G . Microb Genom 2017 3 (6) e000116 |
| The role of supplementary environmental surveillance to complement acute flaccid paralysis surveillance for wild poliovirus in Pakistan - 2011-2013.
Cowger TL , Burns CC , Sharif S , Gary HE Jr , Iber J , Henderson E , Malik F , Zahoor Zaidi SS , Shaukat S , Rehman L , Pallansch MA , Orenstein WA . PLoS One 2017 12 (7) e0180608 |
| Implementation of Objective PASC-Derived Taxon Demarcation Criteria for Official Classification of Filoviruses.
Bao Y , Amarasinghe GK , Basler CF , Bavari S , Bukreyev A , Chandran K , Dolnik O , Dye JM , Ebihara H , Formenty P , Hewson R , Kobinger GP , Leroy EM , Muhlberger E , Netesov SV , Patterson JL , Paweska JT , Smither SJ , Takada A , Towner JS , Volchkov VE , Wahl-Jensen V , Kuhn JH . Viruses 2017 9 (5) |
| Taxonomy of the order Mononegavirales: update 2017.
Amarasinghe GK , Bao Y , Basler CF , Bavari S , Beer M , Bejerman N , Blasdell KR , Bochnowski A , Briese T , Bukreyev A , Calisher CH , Chandran K , Collins PL , Dietzgen RG , Dolnik O , Durrwald R , Dye JM , Easton AJ , Ebihara H , Fang Q , Formenty P , Fouchier RA , Ghedin E , Harding RM , Hewson R , Higgins CM , Hong J , Horie M , James AP , Jiang D , Kobinger GP , Kondo H , Kurath G , Lamb RA , Lee B , Leroy EM , Li M , Maisner A , Muhlberger E , Netesov SV , Nowotny N , Patterson JL , Payne SL , Paweska JT , Pearson MN , Randall RE , Revill PA , Rima BK , Rota P , Rubbenstroth D , Schwemmle M , Smither SJ , Song Q , Stone DM , Takada A , Terregino C , Tesh RB , Tomonaga K , Tordo N , Towner JS , Vasilakis N , Volchkov VE , Wahl-Jensen V , Walker PJ , Wang B , Wang D , Wang F , Wang LF , Werren JH , Whitfield AE , Yan Z , Ye G , Kuhn JH . Arch Virol 2017 162 (8) 2493-2504 |
| A Comparative Analysis of the Lyve-SET Phylogenomics Pipeline for Genomic Epidemiology of Foodborne Pathogens.
Katz LS , Griswold T , Williams-Newkirk AJ , Wagner D , Petkau A , Sieffert C , Van Domselaar G , Deng X , Carleton HA . Front Microbiol 2017 8 375 |
| Zika Virus RNA Replication and Persistence in Brain and Placental Tissue.
Bhatnagar J , Rabeneck DB , Martines RB , Reagan-Steiner S , Ermias Y , Estetter LB , Suzuki T , Ritter J , Keating MK , Hale G , Gary J , Muehlenbachs A , Lambert A , Lanciotti R , Oduyebo T , Meaney-Delman D , Bolanos F , Saad EA , Shieh WJ , Zaki SR . Emerg Infect Dis 2017 23 (3) 405-414 |
| Detection of macrolide resistance genes in culture-negative specimens from Bangladeshi children with invasive pneumococcal diseases.
Hasanuzzaman M , Malaker R , Islam M , Baqui AH , Darmstadt GL , Whitney CG , Saha SK . J Glob Antimicrob Resist 2017 8 131-134 |
| Plasmodium Parasitemia Associated With Increased Survival in Ebola Virus-Infected Patients.
Rosenke K , Adjemian J , Munster VJ , Marzi A , Falzarano D , Onyango CO , Ochieng M , Juma B , Fischer RJ , Prescott JB , Safronetz D , Omballa V , Owuor C , Hoenen T , Groseth A , Martellaro C , van Doremalen N , Zemtsova G , Self J , Bushmaker T , McNally K , Rowe T , Emery SL , Feldmann F , Williamson BN , Best SM , Nyenswah TG , Grolla A , Strong JE , Kobinger G , Bolay FK , Zoon KC , Stassijns J , Giuliani R , de Smet M , Nichol ST , Fields B , Sprecher A , Massaquoi M , Feldmann H , de Wit E . Clin Infect Dis 2016 63 (8) 1026-33 |
| Reduced evolutionary rate in reemerged Ebola virus transmission chains.
Blackley DJ , Wiley MR , Ladner JT , Fallah M , Lo T , Gilbert ML , Gregory C , D'Ambrozio J , Coulter S , Mate S , Balogun Z , Kugelman J , Nwachukwu W , Prieto K , Yeiah A , Amegashie F , Kearney B , Wisniewski M , Saindon J , Schroth G , Fakoli L , Diclaro JW 2nd , Kuhn JH , Hensley LE , Jahrling PB , Stroher U , Nichol ST , Massaquoi M , Kateh F , Clement P , Gasasira A , Bolay F , Monroe SS , Rambaut A , Sanchez-Lockhart M , Scott Laney A , Nyenswah T , Christie A , Palacios G . Sci Adv 2016 2 (4) e1600378 |
| PCR-Based Serotyping of Streptococcus pneumoniae from Culture-Negative Specimens: Novel Primers for Detection of Serotypes within Serogroup 18.
Tanmoy AM , Saha S , Darmstadt GL , Whitney CG , Saha SK . J Clin Microbiol 2016 |
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