CDC-Authored Genomics and Precision Health Publications Database

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Last data update: Sep 29, 2023. (Total: 4425 publications since 2011)

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Records 1-30 (of 40 Records)

Query Trace: Folster J[original query]
Genome Sequences from a Reemergence of Vibrio cholerae in Haiti, 2022 Reveal Relatedness to Previously Circulating Strains. Walters C , Chen J , Stroika S , Katz LS , Turnsek M , Compre V , Im MS , Gomez S , McCullough A , Landaverde C , Putney J , Caidi H , Folster J , Carleton HA , Boncy J , Lee CC . J Clin Microbiol 2023 e0014223
Increased Multidrug-Resistant Salmonella enterica I Serotype 4,[5],12:i:- Infections Associated with Pork, United States, 2009-2018. Plumb ID , Brown AC , Stokes EK , Chen JC , Carleton H , Tolar B , Sundararaman P , Saupe A , Payne DC , Shah HJ , Folster JP , Friedman CR . Emerg Infect Dis 2023 29 (2) 314-22
Longitudinal serologic and viral testing post-SARS-CoV-2 infection and post-receipt of mRNA COVID-19 vaccine in a nursing home cohort-Georgia, October 2020‒April 2021. Tobolowsky FA , Waltenburg MA , Moritz ED , Haile M , DaSilva JC , Schuh AJ , Thornburg NJ , Westbrook A , McKay SL , LaVoie SP , Folster JM , Harcourt JL , Tamin A , Stumpf MM , Mills L , Freeman B , Lester S , Beshearse E , Lecy KD , Brown LG , Fajardo G , Negley J , McDonald LC , Kutty PK , Brown AC . PLoS One 2022 17 (10) e0275718
Household characteristics associated with surface contamination of SARS-CoV-2 and frequency of RT-PCR and viral culture positivity-California and Colorado, 2021. Shragai T , Pratt C , CastroGeorgi J , Donnelly MAP , Schwartz NG , Soto R , Chuey M , Chu VT , Marcenac P , Park GW , Ahmad A , Albanese B , Totten SE , Austin B , Bunkley P , Cherney B , Dietrich EA , Figueroa E , Folster JM , Godino C , Herzegh O , Lindell K , Relja B , Sheldon SW , Tong S , Vinj J , Thornburg NJ , Matanock AM , Hughes LJ , Stringer G , Hudziec M , Beatty ME , Tate JE , Kirking HL , Hsu CH . PLoS One 2022 17 (10) e0274946
Genome Sequences of 18 Salmonella enterica Serotype Hadar Strains Collected from Patients in the United States. Webb HE , Kim JY , Tagg KA , delaCruz F , Peil-Celis A , Tolar B , Ellison Z , Schwensohn C , Brandenburg J , Nichols M , Folster JP . Microbiol Resour Announc 2022 11 (10) e0052222
Genomic Diversity, Antimicrobial Resistance, and Virulence Gene Profiles of Salmonella Serovar Kentucky Isolated from Humans, Food, and Animal Ceca Content Sources in the United States. Tate H , Hsu CH , Chen JC , Han J , Foley SL , Folster JP , FrancoisWatkins LK , Reynolds J , Tillman GE , Nyirabahizi E , Zhao S . Foodborne Pathog Dis 2022 19 (8) 509-521
SARS-CoV-2 infection risk among vaccinated and unvaccinated household members during the Alpha variant surge - Denver, Colorado, and San Diego, California, January-April 2021. McCormick DW , Konkle SL , Magleby R , Chakrabarti AK , Cherney B , Lindell K , Namageyo-Funa A , Visser S , Soto RA , Donnelly MAP , Stringer G , Austin B , Beatty ME , Stous S , Albanese BA , Chu VT , Chuey M , Dietrich EA , Drobeniuc J , Folster JM , Killerby ME , Lehman JA , McDonald EC , Ruffin J , Schwartz NG , Sheldon SW , Sleweon S , Thornburg NJ , Hughes LJ , Petway M , Tong S , Whaley MJ , Kirking HL , Tate JE , Hsu CH , Matanock A . Vaccine 2022 40 (33) 4845-4855
Five Complete Salmonella enterica Serotype Reading Genomes Recovered from Patients in the United States. Webb HE , Tagg KA , Kim JY , Miller EA , Johnson TJ , Peil-Celis A , delaCruz F , Folster JP . Microbiol Resour Announc 2022 11 (7) e0038822
Household Transmission and Symptomology of SARS-CoV-2 Alpha Variant Among Children-California and Colorado, 2021. Waltenburg MA , Whaley MJ , Chancey RJ , Donnelly MAP , Chuey MR , Soto R , Schwartz NG , Chu VT , Sleweon S , McCormick DW , Uehara A , Retchless AC , Tong S , Folster JM , Petway M , Thornburg NJ , Drobeniuc J , Austin B , Hudziec MM , Stringer G , Albanese BA , Totten SE , Matzinger SR , Staples JE , Killerby ME , Hughes LJ , Matanock A , Beatty M , Tate JE , Kirking HL , Hsu CH . J Pediatr 2022 247 29-37 e7
Fourteen mcr-1-Positive Salmonella enterica Isolates Recovered from Travelers Returning to the United States from the Dominican Republic. Webb HE , Kim JY , Tagg KA , Kapsak CJ , Tobolowsky F , Birhane MG , FrancoisWatkins L , Folster JP . Microbiol Resour Announc 2022 11 (5) e0011822
The Use of Whole-Genome Sequencing by the Federal Interagency Collaboration for Genomics for Food and Feed Safety in the United States. Stevens EL , Carleton HA , Beal J , Tillman GE , Lindsey RL , Lauer AC , Pightling A , Jarvis KG , Ottesen A , Ramachandran P , Hintz L , Katz LS , Folster JP , Whichard JM , Trees E , Timme RE , McDermott P , Wolpert B , Bazaco M , Zhao S , Lindley S , Bruce BB , Griffin PM , Brown E , Allard M , Tallent S , Irvin K , Hoffmann M , Wise M , Tauxe R , Gerner-Smidt P , Simmons M , Kissler B , Defibaugh-Chavez S , Klimke W , Agarwala R , Lindsay J , Cook K , Austerman SR , Goldman D , McGarry S , Hale KR , Dessai U , Musser SM , Braden C . J Food Prot 2022 85 (5) 755-772
Household transmission of SARS-CoV-2 Alpha variant - United States, 2021. Donnelly MAP , Chuey MR , Soto R , Schwartz NG , Chu VT , Konkle SL , Sleweon S , Ruffin J , Haberling DL , Guagliardo SAJ , Stoddard RA , Anderson RD , Morgan CN , Rossetti R , McCormick DW , Magleby R , Sheldon SW , Dietrich EA , Uehara A , Retchless AC , Tong S , Folster JM , Drobeniuc J , Petway ME , Austin B , Stous S , McDonald E , Jain S , Hudziec MM , Stringer G , Albanese BA , Totten SE , Staples JE , Killerby ME , Hughes L , Matanock A , Beatty M , Tate JE , Kirking HL , Hsu CH . Clin Infect Dis 2022 75 (1) e122-e132
Correlation between Phenotypic and In Silico Detection of Antimicrobial Resistance in Salmonella enterica in Canada Using Staramr. Bharat A , Petkau A , Avery BP , Chen J , Folster J , Carson CA , Kearney A , Nadon C , Mabon P , Thiessen J , Alexander DC , Allen V , ElBailey S , Bekal S , German GJ , Haldane D , Hoang L , Chui L , Minion J , Zahariadis G , VanDomselaar G , Reid-Smith RJ , Mulvey MR . Microorganisms 2022 10 (2)
Outbreak of Multidrug-Resistant Salmonella Heidelberg Infections Linked to Dairy Calf Exposure, United States, 2015-2018. Nichols M , Gollarza L , Sockett D , Aulik N , Patton E , FrancoisWatkins LK , Gambino-Shirley KJ , Folster JP , Chen JC , Tagg KA , Stapleton GS , Trees E , Ellison Z , Lombard J , Morningstar-Shaw B , Schlater L , Elbadawi L , Klos R . Foodborne Pathog Dis 2022 19 (3) 199-208
Epidemiologic, immunologic, and virus characteristics in patients with paired SARS-CoV-2 serology and reverse transcription polymerase chain reaction testing. Shragai T , Smith-Jeffcoat SE , Koh M , Schechter MC , Rebolledo PA , Kasinathan V , Wang Y , Hoffman A , Miller H , Tejada-Strop A , Jain S , Tamin A , Harcourt JL , Thornburg NJ , Wong P , Medrzycki M , Folster JM , Semenova V , Steward-Clark E , Drobenuic J , Biedron C , Stewart RJ , daSilva J , Kirking HL , Tate JE . J Infect Dis 2021 225 (2) 229-237
Epidemiologic characteristics associated with SARS-CoV-2 antigen-based test results, rRT-PCR cycle threshold values, subgenomic RNA, and viral culture results from university testing. Ford L , Lee C , Pray IW , Cole D , Bigouette JP , Abedi GR , Bushman D , Delahoy MJ , Currie DW , Cherney B , Kirby M , Fajardo G , Caudill M , Langolf K , Kahrs J , Zochert T , Kelly P , Pitts C , Lim A , Aulik N , Tamin A , Harcourt JL , Queen K , Zhang J , Whitaker B , Browne H , Medrzycki M , Shewmaker P , Bonenfant G , Zhou B , Folster J , Bankamp B , Bowen MD , Thornburg NJ , Goffard K , Limbago B , Bateman A , Tate JE , Gieryn D , Kirking HL , Westergaard R , Killerby M . Clin Infect Dis 2021 73 (6) e1348-e1355
Clinical and Laboratory Findings in Patients with Potential SARS-CoV-2 Reinfection, May-July 2020. Lee JT , Hesse EM , Paulin HN , Datta D , Katz LS , Talwar A , Chang G , Galang RR , Harcourt JL , Tamin A , Thornburg NJ , Wong KK , Stevens V , Kim K , Tong S , Zhou B , Queen K , Drobeniuc J , Folster JM , Sexton DJ , Ramachandran S , Browne H , Iskander J , Mitruka K . Clin Infect Dis 2021 73 (12) 2217-2225
Carriage and Gene Content Variability of the pESI-Like Plasmid Associated with Salmonella Infantis Recently Established in United States Poultry Production. McMillan EA , Wasilenko JL , Tagg KA , Chen JC , Simmons M , Gupta SK , Tillman GE , Folster J , Jackson CR , Frye JG . Genes (Basel) 2020 11 (12)
Comparison of Molecular Subtyping and Antimicrobial Resistance Detection Methods Used in a Large Multi-State Outbreak of Extensively Drug-Resistant Campylobacter jejuni Infections Linked to Pet Store Puppies. Joseph LA , FrancoisWatkins LK , Chen J , Tagg KA , Bennett C , Caidi H , Folster JP , Laughlin ME , Koski L , Silver R , Stevenson L , Robertson S , Pruckler J , Nichols M , Pouseele H , Carleton HA , Basler C , Friedman CR , Geissler A , Hise KB , Aubert RD . J Clin Microbiol 2020 58 (10)
Analysis of the reiteration regions (R1 to R5) of varicella-zoster virus. Jensen NJ , Depledge DP , Ng TFF , Leung J , Quinlivan M , Radford KW , Folster J , Tseng HF , LaRussa P , Jacobsen SJ , Breuer J , Schmid DS . Virology 2020 546 38-50
Emergence of a Novel Salmonella enterica Serotype Reading Clonal Group Is Linked to Its Expansion in Commercial Turkey Production, Resulting in Unanticipated Human Illness in North America. Miller EA , Elnekave E , Flores-Figueroa C , Johnson A , Kearney A , Munoz-Aguayo J , Tagg KA , Tschetter L , Weber BP , Nadon CA , Boxrud D , Singer RS , Folster JP , Johnson TJ . mSphere 2020 5 (2)
Identification and Characterization of Shigella with Decreased Susceptibility to Azithromycin in the United States, 2005 to 2014. Campbell D , Bowen A , Bhatnagar A , McCullough A , Grass J , Chen J , Folster JP . J Glob Antimicrob Resist 2019 21 417-419
Corrigendum: Whole Genome Sequencing: Bridging One-Health Surveillance of Foodborne Diseases. Gerner-Smidt Peter, Besser John, Concepción-Acevedo Jeniffer, Folster Jason P, Huffman Jasmine, Joseph Lavin A, Kucerova Zuzana, Nichols Megin C, Schwensohn Colin A, Tolar Beth. Frontiers in public health 2019 7365 . Frontiers in public health 2019 7365
Novel quinolone resistance determinant, qepA8, in Shigella flexneri isolated in the United States, 2016. Webb HE , Tagg KA , Chen JC , Kim J , Lindsey R , FrancoisWatkins LK , Karp BE , Sugawara Y , Folster JP . Antimicrob Agents Chemother 2019 63 (12)
Validating the NCBI AMRFinder Tool and Resistance Gene Database Using Antimicrobial Resistance Genotype-Phenotype Correlations in a Collection of NARMS Isolates. Feldgarden M , Brover V , Haft DH , Prasad AB , Slotta DJ , Tolstoy I , Tyson GH , Zhao S , Hsu CH , McDermott PF , Tadesse DA , Morales C , Simmons M , Tillman G , Wasilenko J , Folster JP , Klimke W . Antimicrob Agents Chemother 2019 63 (11)
Whole Genome Sequencing: Bridging One-Health Surveillance of Foodborne Diseases. Gerner-Smidt P , Besser J , Concepcion-Acevedo J , Folster JP , Huffman J , Joseph LA , Kucerova Z , Nichols MC , Schwensohn CA , Tolar B . Front Public Health 2019 7 172
Genotypes of clinical varicella-zoster virus isolates from Manaus, Brazil. Bastos MS , Folster J , Alvarenga OP , Sampaio DA , Rabelo RMP , Joao GAP , Lacerda MVG , Schmid DS . Rev Soc Bras Med Trop 2019 52 e20180166
Multidrug-Resistant Campylobacter jejuni Outbreak Linked to Puppy Exposure - United States, 2016-2018. Montgomery MP , Robertson S , Koski L , Salehi E , Stevenson LM , Silver R , Sundararaman P , Singh A , Joseph LA , Weisner MB , Brandt E , Prarat M , Bokanyi R , Chen JC , Folster JP , Bennett CT , FrancoisWatkins LK , Aubert RD , Chu A , Jackson J , Blanton J , Ginn A , Ramadugu K , Stanek D , DeMent J , Cui J , Zhang Y , Basler C , Friedman CR , Geissler AL , Crowe SJ , Dowell N , Dixon S , Whitlock L , Williams I , Jhung MA , Nichols MC , deFijter S , Laughlin ME . MMWR Morb Mortal Wkly Rep 2018 67 (37) 1032-1035
Novel trimethoprim resistance gene dfrA34 identified in Salmonella Heidelberg in the USA. Tagg KA , FrancoisWatkins L , Moore MD , Bennett C , Joung YJ , Chen JC , Folster JP . J Antimicrob Chemother 2018 74 (1) 38-41
Revisiting the genotyping scheme for varicella-zoster viruses based on whole-genome comparisons. Jensen Nancy J, Rivailler Pierre, Tseng Hung Fu, Quinlivan Mark L, Radford Kay, Folster Jennifer, Harpaz Rafael, LaRussa Philip, Jacobsen Steven, Scott Schmid D.The Journal of general virology 2017 Jun (6) 1434-1438 . The Journal of general virology 2017 Jun (6) 1434-1438