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CDC-Authored Genomics and Precision Health Publications Database|Home|PHGKB

CDC-Authored Genomics and Precision Health Publications Database


Last data update: Dec 04, 2023. (Total: 4781 publications since 2011)
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Records 1-29 (of 29 Records)
Query Trace: Diallo K[original query]
Malaria surveillance reveals parasite relatedness, signatures of selection, and correlates of transmission across Senegal
Schaffner SF , Badiane A , Khorgade A , Ndiop M , Gomis J , Wong W , Ndiaye YD , Diedhiou Y , Thwing J , Seck MC , Early A , Sy M , Deme A , Diallo MA , Sy N , Sene A , Ndiaye T , Sow D , Dieye B , Ndiaye IM , Gaye A , Ndiaye A , Battle KE , Proctor JL , Bever C , Fall FB , Diallo I , Gaye S , Sene D , Hartl DL , Wirth DF , MacInnis B , Ndiaye D , Volkman SK .
Nat Commun 2023 14 (1) 7268 type
Resistance is common in paediatric patients failing ART in South Africa
Hunt GM , Yousif M , Levin L , Ledwaba J , Steegen K , Kufa T , Zwane H , Kalimashe M , Kana V , Aynalem G , Perlman J , Ayalew K , Kindra G , Diallo K , Carmona S , Sherman G , Raizes EJ .
J Antimicrob Chemother 2023 type
Implementation of DHIS2 for Disease Surveillance in Guinea: 2015-2020.
Reynolds E , Martel LD , Bah MO , Bah M , Bah MB , Boubacar B , Camara N , Camara YB , Corvil S , Diallo BI , Diallo IT , Diallo MK , Diallo MT , Diallo T , Guilavogui S , Hemingway-Foday JJ , Hann F , Kaba A , Kaba AK , Kande M , Lamarana DM , Middleton K , Sidibe N , Souare O , Standley CJ , Stolka KB , Tchwenko S , Worrell MC , MacDonald PDM .
Front Public Health 2021 9 761196
Acquired HIV drug resistance and virologic monitoring in a HIV hyper-endemic setting in KwaZulu-Natal Province, South Africa.
Chimukangara B , Lessells RJ , Singh L , Grigalionyte I , Yende-Zuma N , Adams R , Dawood H , Dlamini L , Buthelezi S , Chetty S , Diallo K , Duffus WA , Mogashoa M , Hagen MB , Giandhari J , deOliveira T , Moodley P , Padayatchi N , Naidoo K .
AIDS Res Ther 2021 18 (1) 74 type
Distribution and Clonality of drug-resistant tuberculosis in South Africa.
Said H , Ratabane J , Erasmus L , Gardee Y , Omar S , Dreyer A , Ismail F , Bhyat Z , Lebaka T , vanderMeulen M , Gwala T , Adelekan A , Diallo K , Ismail N .
BMC Microbiol 2021 21 (1) 157
Therapeutic efficacy of artemether-lumefantrine and artesunate-amodiaquine for the treatment of uncomplicated Plasmodium falciparum malaria in Mali, 2015-2016.
Diarra Y , Kon O , Sangar L , Doumbia L , Haidara DBB , Diallo M , Maiga A , Sango HA , Sidib H , Mihigo J , Nace D , Ljolje D , Talundzic E , Udhayakumar V , Eckert E , Woodfill CJ , Moriarty LF , Lim P , Krogstad DJ , Halsey ES , Lucchi NW , Koita OA .
Malar J 2021 20 (1) 235
Molecular diagnostic assays for the detection of common bacterial meningitis pathogens: A narrative review.
Diallo K , Feteh VF , Ibe L , Antonio M , Caugant DA , duPlessis M , Deghmane AE , Feavers IM , Fernandez K , Fox LM , Rodrigues CMC , Ronveaux O , Taha MK , Wang X , Brueggemann AB , Maiden MCJ , Harrison OB .
EBioMedicine 2021 65 103274
HIV drug resistance profile in South Africa: Findings and implications from the 2017 national HIV household survey.
Moyo S , Hunt G , Zuma K , Zungu M , Marinda E , Mabaso M , Kana V , Kalimashe M , Ledwaba J , Naidoo I , Takatshana S , Matjokotja T , Dietrich C , Raizes E , Diallo K , Kindra G , Mugore L , Rehle T .
PLoS One 2020 15 (11) e0241071 type
Efficacy and safety of artesunate-amodiaquine and artemether-lumefantrine and prevalence of molecular markers associated with resistance, Guinea: an open-label two-arm randomised controlled trial.
Beavogui AH , Camara A , Delamou A , Diallo MS , Doumbouya A , Kourouma K , Bouedouno P , Guilavogui T , DosSantosSouza S , Kelley J , Talundzic E , Fofana A , Plucinski MM .
Malar J 2020 19 (1) 223
Moderate-to-High Levels of Pretreatment HIV Drug Resistance in KwaZulu-Natal Province, South Africa.
Chimukangara B , Kharsany ABM , Lessells RJ , Naidoo K , Rhee SY , Manasa J , Graf T , Lewis L , Cawood C , Khanyile D , Diallo K , Ayalew KA , Shafer RW , Hunt G , Pillay D , Abdool SK , deOliveira T .
AIDS Res Hum Retroviruses 2019 35 (2) 129-138
Epidemiology of Bacterial Meningitis in the Nine Years Since Meningococcal Serogroup A Conjugate Vaccine Introduction, Niger, 2010-2018.
Sidikou F , Potts CC , Zaneidou M , Mbaeyi S , Kadade G , Paye MF , Ousmane S , Issaka B , Chen A , Chang HY , Issifou D , Lingani C , Sakande S , Bienvenu B , Mahamane AE , Diallo AO , Moussa A , Seidou I , Abdou M , Sidiki A , Garba O , Haladou S , Testa J , ObamaNse R , Mainassara HB , Wang X .
J Infect Dis 2019 220 S206-s215 type
Trends in Pretreatment HIV-1 Drug Resistance in Antiretroviral Therapy-naive Adults in South Africa, 2000-2016: A Pooled Sequence Analysis.
Chimukangara B , Lessells RJ , Rhee SY , Giandhari J , Kharsany ABM , Naidoo K , Lewis L , Cawood C , Khanyile D , Ayalew KA , Diallo K , Samuel R , Hunt G , Vandormael A , Stray-Pedersen B , Gordon M , Makadzange T , Kiepiela P , Ramjee G , Ledwaba J , Kalimashe M , Morris L , Parikh UM , Mellors JW , Shafer RW , Katzenstein D , Moodley P , Gupta RK , Pillay D , AbdoolKarim SS , deOliveira T .
EClinicalMedicine 2019 9 26-34
Mosquito microevolution drives Plasmodium falciparum dynamics.
Gildenhard Markus, Rono Evans K, Diarra Assetou, Boissière Anne, Bascunan Priscila, Carrillo-Bustamante Paola, Camara Djeneba, Krüger Hanne, Mariko Modibo, Mariko Ramata, Mireji Paul, Nsango Sandrine E, Pompon Julien, Reis Yara, Rono Martin K, Seda Pamela B, Thailayil Janis, Traorè Alou, Yapto Cynthia V, Awono-Ambene Parfait, Dabiré Roch K, Diabaté Abdulaye, Masiga Daniel, Catteruccia Flaminia, Morlais Isabelle, Diallo Mouctar, Sangare Djibril, Levashina Elena A. Nature microbiology 2019 4(6) 941-947 .
Nature microbiology 2019 4(6) 941-947 type
Field investigation with real-time virus genetic characterisation support of a cluster of Ebola virus disease cases in Dubréka, Guinea, April to June 2015.
Pini A , Zomahoun D , Duraffour S , Derrough T , Charles M , Quick J , Loman N , Cowley L , Leno M , Ouedraogo N , Thiam O , Hernandez-Romieu A , Iko A , Keita H , Konate D , Soumah AA , Bouchouar E , Ileka-Priouzeau S , Keita S , Diallo B , Cisse F , Jansa J , Carroll M , Gunther S , Severi E , Formenty P .
Euro Surveill 2018 23 (12)
Cross-Border Transmission of Ebola Virus as the Cause of a Resurgent Outbreak in Liberia in April 2016.
Mate SE , Wiley MR , Ladner JT , Dokubo EK , Fakoli L , Fallah M , Nyenswah TG , DiClaro JW , Deboer JT , Williams DE , Bolay F , Palacios G .
Clin Infect Dis 2018 67 (7) 1147-1149 type
Measuring the impact of seasonal malaria chemoprevention as part of routine malaria control in Kita, Mali.
Diawara Fatou, Steinhardt Laura C, Mahamar Almahamoudou, Traore Tiangoua, Kone Daouda T, Diawara Halimatou, Kamate Beh, Kone Diakalia, Diallo Mouctar, Sadou Aboubacar, Mihigo Jules, Sagara Issaka, Djimde Abdoulaye A, Eckert Erin, Dicko Alassane. Malaria journal 2017 Aug 16(1) 325 .
Malaria journal 2017 Aug 16(1) 325
Virus genomes reveal factors that spread and sustained the Ebola epidemic.
Dudas Gytis, Carvalho Luiz Max, Bedford Trevor, Tatem Andrew J, Baele Guy, Faria Nuno R, Park Daniel J, Ladner Jason T, Arias Armando, Asogun Danny, Bielejec Filip, Caddy Sarah L, Cotten Matthew, D'Ambrozio Jonathan, Dellicour Simon, Caro Antonino Di, Diclaro Joseph W, Duraffour Sophie, Elmore Michael J, Fakoli Lawrence S, Faye Ousmane, Gilbert Merle L, Gevao Sahr M, Gire Stephen, Gladden-Young Adrianne, Gnirke Andreas, Goba Augustine, Grant Donald S, Haagmans Bart L, Hiscox Julian A, Jah Umaru, Kugelman Jeffrey R, Liu Di, Lu Jia, Malboeuf Christine M, Mate Suzanne, Matthews David A, Matranga Christian B, Meredith Luke W, Qu James, Quick Joshua, Pas Suzan D, Phan My V T, Pollakis Georgios, Reusken Chantal B, Sanchez-Lockhart Mariano, Schaffner Stephen F, Schieffelin John S, Sealfon Rachel S, Simon-Loriere Etienne, Smits Saskia L, Stoecker Kilian, Thorne Lucy, Tobin Ekaete Alice, Vandi Mohamed A, Watson Simon J, West Kendra, Whitmer Shannon, Wiley Michael R, Winnicki Sarah M, Wohl Shirlee, Wölfel Roman, Yozwiak Nathan L, Andersen Kristian G, Blyden Sylvia O, Bolay Fatorma, Carroll Miles W, Dahn Bernice, Diallo Boubacar, Formenty Pierre, Fraser Christophe, Gao George F, Garry Robert F, Goodfellow Ian, Günther Stephan, Happi Christian T, Holmes Edward C, Kargbo Brima, Keïta Sakoba, Kellam Paul, Koopmans Marion P G, Kuhn Jens H, Loman Nicholas J, Magassouba N'Faly, Naidoo Dhamari, Nichol Stuart T, Nyenswah Tolbert, Palacios Gustavo, Pybus Oliver G, Sabeti Pardis C, Sall Amadou, Ströher Ute, Wurie Isatta, Suchard Marc A, Lemey Philippe, Rambaut Andrew. Nature 2017 Apr .
Nature 2017 Apr (7650) 309-315
Genetic Assessment of African Swine Fever Isolates Involved in Outbreaks in the Democratic Republic of Congo between 2005 and 2012 Reveals Co-Circulation of p72 Genotypes I, IX and XIV, Including 19 Variants.
Mulumba-Mfumu Leopold K, Achenbach Jenna E, Mauldin Matthew R, Dixon Linda K, Tshilenge Curé Georges, Thiry Etienne, Moreno Noelia, Blanco Esther, Saegerman Claude, Lamien Charles E, Diallo Adama. Viruses 2017 Feb 9(2) .
Viruses 2017 Feb 9(2)
Ebola virus persistence in breast milk after no reported illness: a likely source of virus transmission from mother to child.
Sissoko Daouda, Keïta Mory, Diallo Boubacar, Aliabadi Negar, Fitter David L, Dahl Benjamin A, Bore Joseph Akoi, Koundouno Fara Raymond, Singethan Katrin, Meisel Sarah, Enkirch Theresa, Mazzarelli Antonio, Amburgey Victoria, Faye Ousmane, Sall Amadou Alpha, Magassouba N'Faly, Carroll Miles W, Anglaret Xavier, Malvy Denis, Formenty Pierre, Aylward Raymond Bruce, Keïta Sakoba, Djingarey Mamoudou Harouna, Loman Nicholas J, Günther Stephan, Duraffour Sophie. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2016 Dec .
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2016 Dec
Evaluation of the Illumigene Malaria LAMP: A Robust Molecular Diagnostic Tool for Malaria Parasites.
Lucchi Naomi W, Gaye Marie, Diallo Mammadou Alpha, Goldman Ira F, Ljolje Dragan, Deme Awa Bineta, Badiane Aida, Ndiaye Yaye Die, Barnwell John W, Udhayakumar Venkatachalam, Ndiaye Daouda. Scientific reports 2016 Nov 636808 .
Scientific reports 2016 Nov 36808
Non-falciparum malaria in Dakar: a confirmed case of Plasmodium ovale wallikeri infection.
Diallo Mamadou A, Badiane Aida S, Diongue Khadim, Deme Awa, Lucchi Naomi W, Gaye Marie, Ndiaye Tolla, Ndiaye Mouhamadou, Sene Louise K, Diop Abdoulaye, Gaye Amy, Ndiaye Yaye D, Samb Diama, Yade Mamadou S, Ndir Omar, Udhayakumar Venkatachalam, Ndiaye Daouda. Malaria journal 2016 15(1) 429 .
Malaria journal 2016 15(1) 429
Viral Genetic Diversity and Polymorphisms in a Cohort of HIV-1-Infected Patients Eligible for Initiation of Antiretroviral Therapy in Abuja, Nigeria.
Diallo Karidia, Zheng Du-Ping, Rottinghaus Erin K, Bassey Orji, Yang Chunfu.AIDS Res. Hum. Retroviruses 2015 May (5) 564-75 .
AIDS Res. Hum. Retroviruses 2015 May (5) 564-75
Field study of dried blood spot specimens for HIV-1 drug resistance genotyping.
Parry C M, Parkin N, Diallo K, Mwebaza S, Batamwita R, DeVos J, Bbosa N, Lyagoba F, Magambo B, Jordan M R, Downing R, Zhang G, Kaleebu P, Yang C, Bertagnolio S. J. Clin. Microbiol. 2014 Aug 52(8) 2868-75 .
J. Clin. Microbiol. 2014 Aug 52(8) 2868-75
Molecular characterization of ambiguous mutations in HIV-1 polymerase gene: implications for monitoring HIV infection status and drug resistance.
Zheng Du-Ping, Rodrigues Margarida, Bile Ebi, Nguyen Duc B, Diallo Karidia, DeVos Joshua R, Nkengasong John N, Yang Chunfu. PLoS ONE 2013 8(10) e77649 .
PLoS ONE 2013 8(10) e77649
Simultaneous detection of major drug resistance mutations in the protease and reverse transcriptase genes for HIV-1 subtype C by use of a multiplex allele-specific assay.
Zhang Guoqing, Cai Fangping, Zhou Zhiyong, DeVos Joshua, Wagar Nick, Diallo Karidia, Zulu Isaac, Wadonda-Kabondo Nellie, Stringer Jeffrey S A, Weidle Paul J, Ndongmo Clement B, Sikazwe Izukanji, Sarr Abdoulaye, Kagoli Matthew, Nkengasong John, Gao Feng, Yang Chunfu. J. Clin. Microbiol. 2013 Nov 51(11) 3666-74 .
J. Clin. Microbiol. 2013 Nov 51(11) 3666-74
Evaluation of a dried blood and plasma collection device, SampleTanker(®), for HIV type 1 drug resistance genotyping in patients receiving antiretroviral therapy.
Diallo Karidia, Lehotzky Erica, Zhang Jing, Zhou Zhiyong, de Rivera Ivette Lorenzana, Murillo Wendy E, Nkengasong John, Sabatier Jennifer, Zhang Guoqing, Yang Chunfu. AIDS Res. Hum. Retroviruses 2014 Jan 30(1) 67-73 .
AIDS Res. Hum. Retroviruses 2014 Jan 30(1) 67-73
Comparison of HIV-1 resistance profiles in plasma RNA versus PBMC DNA in heavily treated patients in Honduras, a resource-limited country.
Diallo Karidia, Murillo Wendy E, de Rivera Ivette Lorenzana, Albert Jan, Zhou Zhiyong, Nkengasong John, Zhang Guoqing, Sabatier Jennifer F, Yang Chunfu. Int J Mol Epidemiol Genet 2012 3(1) 56-65 .
Int J Mol Epidemiol Genet 2012 3(1) 56-65
Dried blood spot specimens are a suitable alternative sample type for HIV-1 viral load measurement and drug resistance genotyping in patients receiving first-line antiretroviral therapy.
Rottinghaus Erin K, Ugbena Richard, Diallo Karidia, Bassey Orji, Azeez Aderemi, Devos Joshua, Zhang Guoqing, Aberle-Grasse John, Nkengasong John, Yang Chunfu. Clin. Infect. Dis. 2012 Apr 54(8) 1187-95 .
Clin. Infect. Dis. 2012 Apr 54(8) 1187-95
Optimization of a low cost and broadly sensitive genotyping assay for HIV-1 drug resistance surveillance and monitoring in resource-limited settings.
Zhou Zhiyong, Wagar Nick, DeVos Joshua R, Rottinghaus Erin, Diallo Karidia, Nguyen Duc B, Bassey Orji, Ugbena Richard, Wadonda-Kabondo Nellie, McConnell Michelle S, Zulu Isaac, Chilima Benson, Nkengasong John, Yang Chunfu. PLoS ONE 2011 6(11) e28184 .
PLoS ONE 2011 6(11) e28184
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