CDC-Authored Genomics and Precision Health Publications Database
Last data update: Sep 03, 2024. (Total: 6282 publications)
Query Trace: Barclay L[original query] |
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PHA4GE quality control contextual data tags: standardized annotations for sharing public health sequence datasets with known quality issues to facilitate testing and training
Griffiths EJ , Mendes I , Maguire F , Guthrie JL , Wee BA , Schmedes S , Holt K , Yadav C , Cameron R , Barclay C , Dooley D , MacCannell D , Chindelevitch L , Karsch-Mizrachi I , Waheed Z , Katz L , Petit Iii R , Dave M , Oluniyi P , Nasar MI , Raphenya A , Hsiao WWL , Timme RE . Microb Genom 2024 10 (6) ![]() |
An updated framework for SARS-CoV-2 variants reflects the unpredictability of viral evolution
Subissi L , Otieno JR , Worp N , Attar Cohen H , Oude Munnink BB , Abu-Raddad LJ , Alm E , Barakat A , Barclay WS , Bhiman JN , Caly L , Chand M , Chen M , Cullinane A , de Oliveira T , Drosten C , Druce J , Effler P , El Masry I , Faye A , Ghedin E , Grant R , Haagmans BL , Happi C , Herring BL , Hodcroft EB , Ikejezie J , Katawera V , Kassamali ZA , Leo YS , Leung GM , Kondor RJ , Marklewitz M , Mendez-Rico J , Melhem NM , Munster V , Nahapetyan K , Naindoo D , Oh DY , Peacock TP , Peiris M , Peng Z , Poon LLM , Rambaut A , Saha S , Shen Y , Siqueira MM , Volz E , Tessema SK , Thiel V , Triki H , van der Werf S , von Eije K , Cunningham J , Koopmans MPG , von Gottberg A , Agrawal A , Van Kerkhove MD . Nat Med 2024 ![]() |
Emergence of novel norovirus GII.4 variant
Chhabra P , Tully DC , Mans J , Niendorf S , Barclay L , Cannon JL , Montmayeur AM , Pan CY , Page N , Williams R , Tutill H , Roy S , Celma C , Beard S , Mallory ML , Manouana GP , Velavan TP , Adegnika AA , Kremsner PG , Lindesmith LC , Hué S , Baric RS , Breuer J , Vinjé J . Emerg Infect Dis 2024 30 (1) 163-167 ![]() |
An early warning system for emerging SARS-CoV-2 variants.
Subissi L , von Gottberg A , Thukral L , Worp N , Oude Munnink BB , Rathore S , Abu-Raddad LJ , Aguilera X , Alm E , Archer BN , Attar Cohen H , Barakat A , Barclay WS , Bhiman JN , Caly L , Chand M , Chen M , Cullinane A , de Oliveira T , Drosten C , Druce J , Effler P , El Masry I , Faye A , Gaseitsiwe S , Ghedin E , Grant R , Haagmans BL , Herring BL , Iyer SS , Kassamali Z , Kakkar M , Kondor RJ , Leite JA , Leo YS , Leung GM , Marklewitz M , Moyo S , Mendez-Rico J , Melhem NM , Munster V , Nahapetyan K , Oh DY , Pavlin BI , Peacock TP , Peiris M , Peng Z , Poon LLM , Rambaut A , Sacks J , Shen Y , Siqueira MM , Tessema SK , Volz EM , Thiel V , van der Werf S , Briand S , Perkins MD , Van Kerkhove MD , Koopmans MPG , Agrawal A . Nat Med 2022 28 (6) 1110-1115 |
Detection of SARS-CoV-2 on Surfaces in Households of Persons with COVID-19.
Marcenac P , Park GW , Duca LM , Lewis NM , Dietrich EA , Barclay L , Tamin A , Harcourt JL , Thornburg NJ , Rispens J , Matanock A , Kiphibane T , Christensen K , Pawloski LC , Fry AM , Hall AJ , Tate JE , Vinjé J , Kirking HL , Pevzner E . Int J Environ Res Public Health 2021 18 (15) ![]() |
Global Trends in Norovirus Genotype Distribution among Children with Acute Gastroenteritis.
Cannon JL , Bonifacio J , Bucardo F , Buesa J , Bruggink L , Chan MC , Fumian TM , Giri S , Gonzalez MD , Hewitt J , Lin JH , Mans J , Muñoz C , Pan CY , Pang XL , Pietsch C , Rahman M , Sakon N , Selvarangan R , Browne H , Barclay L , Vinjé J . Emerg Infect Dis 2021 27 (5) 1438-1445 |
Human Calicivirus Typing tool: A web-based tool for genotyping human norovirus and sapovirus sequences.
Tatusov RL , Chhabra P , Diez-Valcarce M , Barclay L , Cannon JL , Vinjé J . J Clin Virol 2020 134 104718 ![]() |
Single-step RT-PCR assay for dual genotyping of GI and GII norovirus strains.
Chhabra P , Browne H , Huynh T , Diez-Valcarce M , Barclay L , Kosek MN , Ahmed T , Lopez MR , Pan CY , Vinjé J . J Clin Virol 2020 134 104689 |
Identifying septic pollution exposure routes during a waterborne norovirus outbreak - A new application for human-associated microbial source tracking qPCR.
Mattioli MC , Benedict KM , Murphy J , Kahler A , Kline KE , Longenberger A , Mitchell PK , Watkins S , Berger P , Shanks OC , Barrett CE , Barclay L , Hall AJ , Hill V , Weltman A . J Microbiol Methods 2020 180 106091 ![]() |
Molecular Epidemiology of Norovirus Outbreaks in Argentina, 2013-2018.
Degiuseppe JI , Barclay L , Gomes KA , Costantini V , Vinje J , Stupka JA . J Med Virol 2020 92 (8) 1330-1333 |
Emerging Novel GII.P16 Noroviruses Associated with Multiple Capsid Genotypes.
Barclay L , Cannon JL , Wikswo ME , Phillips AR , Browne H , Montmayeur AM , Tatusov RL , Burke RM , Hall AJ , Vinje J . Viruses 2019 11 (6) ![]() |
Impact of long-term storage of clinical samples collected from 1996 to 2017 on RT-PCR detection of norovirus.
Cannon JL , Baker M , Barclay L , Vinje J . J Virol Methods 2019 267 35-41 ![]() |
Epidemiologic and Genotypic distribution of Noroviruses among children with Acute Diarrhea and Healthy Controls in a Low-income Rural Setting.
Hossain ME , Rahman R , Ali SI , Islam MM , Rahman MZ , Ahmed S , Faruque ASG , Barclay L , Vinje J , Rahman M . Clin Infect Dis 2018 69 (3) 505-513 |
Evaluation of RIDA ® GENE norovirus GI/GII real time RT-PCR using stool specimens collected from children and adults with acute gastroenteritis.
Kanwar N , Hassan F , Barclay L , Langley C , Vinje J , Bryant PW , George KS , Mosher L , Matthews-Greer JM , Rocha MA , Beenhouwer DO , Harrison CJ , Moffatt M , Shastri N , Selvarangan R . J Clin Virol 2018 104 1-4 |
Genetic and Epidemiologic Trends of Norovirus Outbreaks in the US Demonstrated Emergence of Novel GII.4 Recombinant Viruses, 2013-2016.
Cannon JL , Barclay L , Collins NR , Wikswo ME , Castro CJ , Magana LC , Gregoricus N , Marine RL , Chhabra P , Vinje J . J Clin Microbiol 2017 55 (7) 2208-2221 |
Near Real-Time Surveillance of U.S. Norovirus Outbreaks by the Norovirus Sentinel Testing and Tracking Network - United States, August 2009-July 2015.
Shah MP , Wikswo ME , Barclay L , Kambhampati A , Shioda K , Parashar UD , Vinje J , Hall AJ . MMWR Morb Mortal Wkly Rep 2017 66 (7) 185-189 |
Viral factors in influenza pandemic risk assessment.
Lipsitch M , Barclay W , Raman R , Russell CJ , Belser JA , Cobey S , Kasson PM , Lloyd-Smith JO , Maurer-Stroh S , Riley S , Beauchemin CA , Bedford T , Friedrich TC , Handel A , Herfst S , Murcia PR , Roche B , Wilke CO , Russell CA . Elife 2016 5 |
Strain-Specific Virolysis Patterns of Human Noroviruses in Response to Alcohols.
Park GW , Collins N , Barclay L , Hu L , Prasad BV , Lopman BA , Vinje J . PLoS One 2016 11 (6) e0157787 |
Norovirus genotype profiles associated with foodborne transmission, 1999-2012.
Verhoef L , Hewitt J , Barclay L , Ahmed SM , Lake R , Hall AJ , Lopman B , Kroneman A , Vennema H , Vinje J , Koopmans M . Emerg Infect Dis 2015 21 (4) 592-599 |
RNA populations in immunocompromised patients as reservoirs for novel norovirus variants.
Vega E , Donaldson E , Huynh J , Barclay L , Lopman B , Baric R , Chen LF , Vinje J . J Virol 2014 88 (24) 14184-96 |
Genotypic and epidemiologic trends of norovirus outbreaks in the United States, 2009 to 2013.
Vega E , Barclay L , Gregoricus N , Shirley SH , Lee D , Vinje J . J Clin Microbiol 2013 52 (1) 147-55 |
Genotype GI.6 norovirus, United States, 2010-2012.
Leshem E , Barclay L , Wikswo M , Vega E , Gregoricus N , Parashar UD , Vinje J , Hall AJ . Emerg Infect Dis 2013 19 (8) 1317-20 |
Effects and clinical significance of GII.4 Sydney norovirus, United States, 2012-2013
Leshem E , Wikswo M , Barclay L , Brandt E , Storm W , Salehi E , Desalvo T , Davis T , Saupe A , Dobbins G , Booth HA , Biggs C , Garman K , Woron AM , Parashar UD , Vinje J , Hall AJ . Emerg Infect Dis 2013 19 (8) 1231-8 |
Antiviral activity of nucleoside analogues against norovirus.
Costantini VP , Whitaker T , Barclay L , Lee D , McBrayer TR , Schinazi RF , Vinje J . Antivir Ther 2012 17 (6) 981-91 |
Novel surveillance network for norovirus gastroenteritis outbreaks, United States.
Vega E , Barclay L , Gregoricus N , Williams K , Lee D , Vinje J . Emerg Infect Dis 2011 17 (8) 1389-95 |
Novel norovirus in dogs with diarrhea
Mesquita JR , Barclay L , Jose Nascimento MS , Vinje J . Emerg Infect Dis 2010 16 (6) 980-2 |
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