CDC-Authored Genomics and Precision Health Publications Database

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Last data update: Dec 04, 2023. (Total: 4781 publications since 2011)

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Records 1-30 (of 45 Records)

Query Trace: Adams K[original query]
Effectiveness of the original monovalent coronavirus disease 2019 vaccines in preventing emergency department or urgent care encounters and hospitalizations among adults with disabilities: VISION Network, June 2021-September 2022 Patel P , Schrader KE , Rice CE , Rowley E , Cree RA , DeSilva MB , Embi PJ , Gaglani M , Grannis SJ , Ong TC , Stenehjem E , Naleway AL , Ball S , Natarajan K , Klein NP , Adams K , Kharbanda A , Ray C , Link-Gelles R , Tenforde MW . Open Forum Infect Dis 2023 10 (11) ofad474
Multistate outbreak of turtle-associated salmonellosis highlights ongoing challenges with the illegal sale and distribution of small turtles Nemechek K , Stapleton GS , Waltenburg MA , Low MSF , Gollarza L , Adams J , Peralta V , Lopez K , Morrison A , Schnitzler H , Kline KE , McGinnis S , Nichols M . Zoonoses Public Health 2023
Clinical epidemiology and risk factors for critical outcomes among vaccinated and unvaccinated adults hospitalized with COVID-19-VISION Network, 10 States, June 2021-March 2023 Griggs EP , Mitchell PK , Lazariu V , Gaglani M , McEvoy C , Klein NP , Valvi NR , Irving SA , Kojima N , Stenehjem E , Crane B , Rao S , Grannis SJ , Embi PJ , Kharbanda AB , Ong TC , Natarajan K , Dascomb K , Naleway AL , Bassett E , DeSilva MB , Dickerson M , Konatham D , Fireman B , Allen KS , Barron MA , Beaton M , Arndorfer J , Vazquez-Benitez G , Garg S , Murthy K , Goddard K , Dixon BE , Han J , Grisel N , Raiyani C , Lewis N , Fadel WF , Stockwell MS , Mamawala M , Hansen J , Zerbo O , Patel P , Link-Gelles R , Adams K , Tenforde MW . Clin Infect Dis 2023
Number needed to vaccinate with a COVID-19 booster to prevent a COVID-19-associated hospitalization during SARS-CoV-2 Omicron BA.1 variant predominance, December 2021-February 2022, VISION Network: a retrospective cohort study Adams K , Riddles JJ , Rowley EAK , Grannis SJ , Gaglani M , Fireman B , Hartmann E , Naleway AL , Stenehjem E , Hughes A , Dalton AF , Natarajan K , Dascomb K , Raiyani C , Irving SA , Sloan-Aagard C , Kharbanda AB , DeSilva MB , Dixon BE , Ong TC , Keller J , Dickerson M , Grisel N , Murthy K , Nanez J , Fadel WF , Ball SW , Patel P , Arndorfer J , Mamawala M , Valvi NR , Dunne MM , Griggs EP , Embi PJ , Thompson MG , Link-Gelles R , Tenforde MW . Lancet Reg Health Am 2023 23 100530
Changing severity and epidemiology of adults hospitalized with coronavirus disease 2019 (COVID-19) in the United States after introduction of COVID-19 vaccines, March 2021-August 2022 Kojima N , Adams K , Self WH , Gaglani M , McNeal T , Ghamande S , Steingrub JS , Shapiro NI , Duggal A , Busse LW , Prekker ME , Peltan ID , Brown SM , Hager DN , Ali H , Gong MN , Mohamed A , Exline MC , Khan A , Wilson JG , Qadir N , Chang SY , Ginde AA , Withers CA , Mohr NM , Mallow C , Martin ET , Lauring AS , Johnson NJ , Casey JD , Stubblefield WB , Gibbs KW , Kwon JH , Baughman A , Chappell JD , Hart KW , Jones ID , Rhoads JP , Swan SA , Womack KN , Zhu Y , Surie D , McMorrow ML , Patel MM , Tenforde MW . Clin Infect Dis 2023
SARS-CoV-2 Omicron replacement of Delta as predominant variant, Puerto Rico Santiago GA , Volkman HR , Flores B , Gonzlez GL , Charriez KN , Huertas LC , VanBelleghem SM , Rivera-Amill V , Major C , Colon C , Tosado R , Adams LE , Marzn M , Hernndez L , Cardona I , O'Neill E , Paz-Bailey G , Papa R , Muoz-Jordan JL . Emerg Infect Dis 2023 29 (4) 855-857
Malaria in pregnancy (MiP) studies assessing the clinical performance of highly sensitive rapid diagnostic tests (HS-RDT) for Plasmodium falciparum detection. Ding XC , Incardona S , Serra-Casas E , Charnaud SC , Slater HC , Domingo GJ , Adams ER , TerKuile FO , Samuels AM , Kariuki S , Dittrich S . Malar J 2023 22 (1) 60
Effectiveness of Monovalent mRNA Vaccines Against COVID-19-Associated Hospitalization Among Immunocompetent Adults During BA.1/BA.2 and BA.4/BA.5 Predominant Periods of SARS-CoV-2 Omicron Variant in the United States - IVY Network, 18 States, December 26, 2021-August 31, 2022. Surie D , Bonnell L , Adams K , Gaglani M , Ginde AA , Douin DJ , Talbot HK , Casey JD , Mohr NM , Zepeski A , McNeal T , Ghamande S , Gibbs KW , Files DC , Hager DN , Shehu A , Frosch AP , Erickson HL , Gong MN , Mohamed A , Johnson NJ , Srinivasan V , Steingrub JS , Peltan ID , Brown SM , Martin ET , Khan A , Bender WS , Duggal A , Wilson JG , Qadir N , Chang SY , Mallow C , Rivas C , Kwon JH , Exline MC , Lauring AS , Shapiro NI , Halasa N , Chappell JD , Grijalva CG , Rice TW , Stubblefield WB , Baughman A , Womack KN , Hart KW , Swan SA , Zhu Y , DeCuir J , Tenforde MW , Patel MM , McMorrow ML , Self WH . MMWR Morb Mortal Wkly Rep 2022 71 (42) 1327-1334
Genomic analysis, immunomodulation and deep phenotyping of patients with nodding syndrome. Soldatos A , Nutman TB , Johnson T , Dowell SF , Sejvar JJ , Wilson MR , DeRisi JL , Inati SK , Groden C , Evans C , O'Connell EM , Toliva BO , Aceng JR , Aryek-Kwe J , Toro C , Stratakis CA , Buckler AG , Cantilena C , Palmore TN , Thurm A , Baker EH , Chang R , Fauni H , Adams D , Macnamara EF , Lau CC , Malicdan MCV , Pusey-Swerdzewski B , Downing R , Bunga S , Thomas JD , Gahl WA , Nath A . Brain 2022 146 (3) 968-976
Emergence of a multidrug-resistant and virulent Streptococcus pneumoniae lineage mediates serotype replacement after PCV13: an international whole-genome sequencing study. Lo SW , Mellor K , Cohen R , Alonso AR , Belman S , Kumar N , Hawkins PA , Gladstone RA , vonGottberg A , Veeraraghavan B , Ravikumar KL , Kandasamy R , Pollard SAJ , Saha SK , Bigogo G , Antonio M , Kwambana-Adams B , Mirza S , Shakoor S , Nisar I , Cornick JE , Lehmann D , Ford RL , Sigauque B , Turner P , Mosi J , Obaro SK , Dagan R , Diawara I , Skoczyska A , Wang H , Carter PE , Klugman KP , Rodgers G , Breiman RF , McGee L , Bentley SD , Almagro CM , Varon E . Lancet Microbe 2022 3 (10) e735-e743
Genomic surveillance of SARS-CoV-2 in Puerto Rico enabled early detection and tracking of variants. Santiago GA , Flores B , Gonzlez GL , Charriez KN , Huertas LC , Volkman HR , VanBelleghem SM , Rivera-Amill V , Adams LE , Marzn M , Hernndez L , Cardona I , O'Neill E , Paz-Bailey G , Papa R , Muoz-Jordan JL . Commun Med (Lond) 2022 2 100
Protection of mRNA vaccines against hospitalized COVID-19 in adults over the first year following authorization in the United States. Tenforde MW , Self WH , Zhu Y , Naioti EA , Gaglani M , Ginde AA , Jensen K , Talbot HK , Casey JD , Mohr NM , Zepeski A , McNeal T , Ghamande S , Gibbs KW , Files DC , Hager DN , Shehu A , Prekker ME , Erickson HL , Gong MN , Mohamed A , Johnson NJ , Srinivasan V , Steingrub JS , Peltan ID , Brown SM , Martin ET , Monto AS , Khan A , Hough CL , Busse LW , TenLohuis C , Duggal A , Wilson JG , Qadir N , Chang SY , Mallow C , Rivas C , Babcock HM , Kwon JH , Exline MC , Botros MM , Lauring AS , Shapiro NI , Halasa N , Chappell JD , Grijalva CG , Rice TW , Jones ID , Stubblefield WB , Baughman A , Womack KN , Rhoads JP , Lindsell CJ , Hart KW , Turbyfill C , Olson S , Murray N , Adams K , Patel MM . Clin Infect Dis 2022 76 (3) e460-e468
Analysis of Salmonella enterica Isolated from a Mixed-Use Watershed in Georgia, USA: Antimicrobial Resistance, Serotype Diversity, and Genetic Relatedness to Human Isolates. Cho S , Hiott LM , House SL , Woodley TA , McMillan EA , Sharma P , Barrett JB , Adams ES , Brandenburg JM , Hise KB , BatemanMcDonald JM , Ottesen EA , Lipp EK , Jackson CR , Frye JG . Appl Environ Microbiol 2022 88 (10) e0039322
Comparative genomics of disease and carriage serotype 1 pneumococci. Chaguza C , Ebruke C , Senghore M , Lo SW , Tientcheu PE , Gladstone RA , Tonkin-Hill G , Cornick JE , Yang M , Worwui A , McGee L , Breiman RF , Klugman KP , Kadioglu A , Everett DB , Mackenzie G , Croucher NJ , Roca A , Kwambana-Adams BA , Antonio M , Bentley SD . Genome Biol Evol 2022 14 (4)
Clinical severity of, and effectiveness of mRNA vaccines against, covid-19 from omicron, delta, and alpha SARS-CoV-2 variants in the United States: prospective observational study. Lauring AS , Tenforde MW , Chappell JD , Gaglani M , Ginde AA , McNeal T , Ghamande S , Douin DJ , Talbot HK , Casey JD , Mohr NM , Zepeski A , Shapiro NI , Gibbs KW , Files DC , Hager DN , Shehu A , Prekker ME , Erickson HL , Exline MC , Gong MN , Mohamed A , Johnson NJ , Srinivasan V , Steingrub JS , Peltan ID , Brown SM , Martin ET , Monto AS , Khan A , Hough CL , Busse LW , TenLohuis CC , Duggal A , Wilson JG , Gordon AJ , Qadir N , Chang SY , Mallow C , Rivas C , Babcock HM , Kwon JH , Halasa N , Grijalva CG , Rice TW , Stubblefield WB , Baughman A , Womack KN , Rhoads JP , Lindsell CJ , Hart KW , Zhu Y , Adams K , Schrag SJ , Olson SM , Kobayashi M , Verani JR , Patel MM , Self WH . BMJ 2022 376 e069761
A Streptococcus pneumoniae lineage usually associated with pneumococcal conjugate vaccine (PCV) serotypes is the most common cause of serotype 35B invasive disease in South Africa, following routine use of PCV. Ndlangisa KM , duPlessis M , Lo S , deGouveia L , Chaguza C , Antonio M , Kwambana-Adams B , Cornick J , Everett DB , Dagan R , Hawkins PA , Beall B , Corso A , GrassiAlmeida SC , Ochoa TJ , Obaro S , Shakoor S , Donkor ES , Gladstone RA , Ho PL , Paragi M , Doiphode S , Srifuengfung S , Ford R , Mosi J , Saha SK , Bigogo G , Sigauque B , Eser K , Elmdaghri N , Titov L , Turner P , Kumar KLR , Kandasamy R , Egorova E , Ip M , Breiman RF , Klugman KP , McGee L , Bentley SD , vonGottberg A , TheGlobalPneumococcalSequencing Consortium . Microb Genom 2022 8 (4)
Widespread sharing of pneumococcal strains in a rural African setting: proximate villages are more likely to share similar strains that are carried at multiple timepoints. Senghore M , Chaguza C , Bojang E , Tientcheu PE , Bancroft RE , Lo SW , Gladstone RA , McGee L , Worwui A , Foster-Nyarko E , Ceesay F , Okoi CB , Klugman KP , Breiman RF , Bentley SD , Adegbola R , Antonio M , Hanage WP , Kwambana-Adams BA . Microb Genom 2022 8 (2)
Multistate outbreak of Salmonella Typhimurium linked to pet hedgehogs, United States, 2018-2019. Hoff C , Nichols M , Gollarza L , Scheftel J , Adams J , Tagg KA , FrancoisWatkins L , Poissant T , Stapleton GS , Morningstar-Shaw B , Signs K , Bidol S , Donovan D , Basler C . Zoonoses Public Health 2022 69 (3) 167-174
Acquired HIV drug resistance and virologic monitoring in a HIV hyper-endemic setting in KwaZulu-Natal Province, South Africa. Chimukangara B , Lessells RJ , Singh L , Grigalionyte I , Yende-Zuma N , Adams R , Dawood H , Dlamini L , Buthelezi S , Chetty S , Diallo K , Duffus WA , Mogashoa M , Hagen MB , Giandhari J , deOliveira T , Moodley P , Padayatchi N , Naidoo K . AIDS Res Ther 2021 18 (1) 74
Association Between mRNA Vaccination and COVID-19 Hospitalization and Disease Severity. Tenforde MW , Self WH , Adams K , Gaglani M , Ginde AA , McNeal T , Ghamande S , Douin DJ , Talbot HK , Casey JD , Mohr NM , Zepeski A , Shapiro NI , Gibbs KW , Files DC , Hager DN , Shehu A , Prekker ME , Erickson HL , Exline MC , Gong MN , Mohamed A , Henning DJ , Steingrub JS , Peltan ID , Brown SM , Martin ET , Monto AS , Khan A , Hough CL , Busse LW , TenLohuis CC , Duggal A , Wilson JG , Gordon AJ , Qadir N , Chang SY , Mallow C , Rivas C , Babcock HM , Kwon JH , Halasa N , Chappell JD , Lauring AS , Grijalva CG , Rice TW , Jones ID , Stubblefield WB , Baughman A , Womack KN , Rhoads JP , Lindsell CJ , Hart KW , Zhu Y , Olson SM , Kobayashi M , Verani JR , Patel MM . JAMA 2021 326 (20) 2043-2054
Tracing the Origin, Spread, and Molecular Evolution of Zika Virus in Puerto Rico, 2016-2017. Santiago GA , Kalinich CC , Cruz-Lpez F , Gonzlez GL , Flores B , Hentoff A , Charriez KN , Fauver JR , Adams LE , Sharp TM , Black A , Bedford T , Ellis E , Ellis B , Waterman SH , Paz-Bailey G , Grubaugh ND , Muoz-Jordn JL . Emerg Infect Dis 2021 27 (11) 2971-2973
Streptococcus pneumoniae serotypes that frequently colonise the human nasopharynx are common recipients of penicillin-binding protein gene fragments from Streptococcus mitis. Kalizang'oma A , Chaguza C , Gori A , Davison C , Beleza S , Antonio M , Beall B , Goldblatt D , Kwambana-Adams B , Bentley SD , Heyderman RS . Microb Genom 2021 7 (9)
Notes from the Field: Recurrence of a Multistate Outbreak of Salmonella Typhimurium Infections Linked to Contact with Hedgehogs - United States and Canada, 2020. Waltenburg MA , Nichols M , Waechter H , Higa J , Cronquist L , Lowe AM , Adams JK , McFadden K , McConnell JA , Blank R , Basler C . MMWR Morb Mortal Wkly Rep 2021 70 (32) 1100-1102
Phylogeography and resistome of pneumococcal meningitis in West Africa before and after vaccine introduction. Senghore M , Tientcheu PE , Worwui AK , Jarju S , Okoi C , Suso SMS , Foster-Nyarko E , Ebruke C , Sonko M , Kourna MH , Agossou J , Tsolenyanu E , Renner LA , Ansong D , Sanneh B , Cisse CB , Boula A , Miwanda B , Lo SW , Gladstone RA , Schwartz S , Hawkins P , McGee L , Klugman KP , Breiman RF , Bentley SD , Mwenda JM , Kwambana-Adams BA , Antonio M . Microb Genom 2021 7 (7)
Carriage Dynamics of Pneumococcal Serotypes in Naturally Colonized Infants in a Rural African Setting During the First Year of Life. Chaguza C , Senghore M , Bojang E , Lo SW , Ebruke C , Gladstone RA , Tientcheu PE , Bancroft RE , Worwui A , Foster-Nyarko E , Ceesay F , Okoi C , McGee L , Klugman KP , Breiman RF , Barer MR , Adegbola RA , Antonio M , Bentley SD , Kwambana-Adams BA . Front Pediatr 2020 8 587730
Gen-FS coordinated proficiency test data for genomic foodborne pathogen surveillance, 2017 and 2018 exercises. Timme RE , Lafon PC , Balkey M , Adams JK , Wagner D , Carleton H , Strain E , Hoffmann M , Sabol A , Rand H , Lindsey R , Sheehan D , Baugher JD , Trees E . Sci Data 2020 7 (1) 402
Bacterial genome-wide association study of hyper-virulent pneumococcal serotype 1 identifies genetic variation associated with neurotropism. Chaguza C , Yang M , Cornick JE , duPlessis M , Gladstone RA , Kwambana-Adams BA , Lo SW , Ebruke C , Tonkin-Hill G , Peno C , Senghore M , Obaro SK , Ousmane S , Pluschke G , Collard JM , Sigaque B , French N , Klugman KP , Heyderman RS , McGee L , Antonio M , Breiman RF , vonGottberg A , Everett DB , Kadioglu A , Bentley SD . Commun Biol 2020 3 (1) 559
Within-host microevolution of Streptococcus pneumoniae is rapid and adaptive during natural colonisation. Chaguza C , Senghore M , Bojang E , Gladstone RA , Lo SW , Tientcheu PE , Bancroft RE , Worwui A , Foster-Nyarko E , Ceesay F , Okoi C , McGee L , Klugman KP , Breiman RF , Barer MR , Adegbola RA , Antonio M , Bentley SD , Kwambana-Adams BA . Nat Commun 2020 11 (1) 3442
The Global Meningitis Genome Partnership. Rodgers E , Bentley SD , Borrow R , Bratcher HB , Brisse S , Brueggemann AB , Caugant DA , Findlow J , Fox L , Glennie L , Harrison LH , Harrison OB , Heyderman RS , vanRensburg MJ , Jolley KA , Kwambana-Adams B , Ladhani S , LaForce M , Levin M , Lucidarme J , MacAlasdair N , Maclennan J , Maiden MCJ , Maynard-Smith L , Muzzi A , Oster P , Rodrigues CMC , Serino ORL , Smith V , vanderEnde A , Vazquez J , Wang X , Yezli S , Stuart JM . J Infect 2020 81 (4) 510-520
Visualizing variation within Global Pneumococcal Sequence Clusters (GPSCs) and country population snapshots to contextualize pneumococcal isolates. Gladstone RA , Lo SW , Goater R , Yeats C , Taylor B , Hadfield J , Lees JA , Croucher NJ , vanTonder AJ , Bentley LJ , Quah FX , Blaschke AJ , Pershing NL , Byington CL , Balaji V , Hryniewicz W , Sigauque B , Ravikumar KL , Almeida SCG , Ochoa TJ , Ho PL , duPlessis M , Ndlangisa KM , Cornick JE , Kwambana-Adams B , Benisty R , Nzenze SA , Madhi SA , Hawkins PA , Pollard AJ , Everett DB , Antonio M , Dagan R , Klugman KP , vonGottberg A , Metcalf BJ , Li Y , Beall BW , McGee L , Breiman RF , Aanensen DM , Bentley SD . Microb Genom 2020 6 (5)