CDC-Authored Genomics and Precision Health Publications Database
Last data update: Oct 15, 2024. (Total: 6349 publications)
Query Trace: Adam E[original query] |
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Cryptic transmission of SARS-CoV-2 in Washington State.
Bedford T , Greninger AL , Roychoudhury P , Starita LM , Famulare M , Huang ML , Nalla A , Pepper G , Reinhardt A , Xie H , Shrestha L , Nguyen TN , Adler A , Brandstetter E , Cho S , Giroux D , Han PD , Fay K , Frazar CD , Ilcisin M , Lacombe K , Lee J , Kiavand A , Richardson M , Sibley TR , Truong M , Wolf CR , Nickerson DA , Rieder MJ , Englund JA , Hadfield J , Hodcroft EB , Huddleston J , Moncla LH , Müller NF , Neher RA , Deng X , Gu W , Federman S , Chiu C , Duchin J , Gautom R , Melly G , Hiatt B , Dykema P , Lindquist S , Queen K , Tao Y , Uehara A , Tong S , MacCannell D , Armstrong GL , Baird GS , Chu HY , Shendure J , Jerome KR . medRxiv 2020 |
A Public Health Research Agenda for Managing Infodemics: Methods and Results of the First WHO Infodemiology Conference.
Calleja N , AbdAllah A , Abad N , Ahmed N , Albarracin D , Altieri E , Anoko JN , Arcos R , Azlan AA , Bayer J , Bechmann A , Bezbaruah S , Briand SC , Brooks I , Bucci LM , Burzo S , Czerniak C , De Domenico M , Dunn AG , Ecker UKH , Espinosa L , Francois C , Gradon K , Gruzd A , Gülgün BS , Haydarov R , Hurley C , Astuti SI , Ishizumi A , Johnson N , Johnson Restrepo D , Kajimoto M , Koyuncu A , Kulkarni S , Lamichhane J , Lewis R , Mahajan A , Mandil A , McAweeney E , Messer M , Moy W , Ndumbi Ngamala P , Nguyen T , Nunn M , Omer SB , Pagliari C , Patel P , Phuong L , Prybylski D , Rashidian A , Rempel E , Rubinelli S , Sacco P , Schneider A , Shu K , Smith M , Sufehmi H , Tangcharoensathien V , Terry R , Thacker N , Trewinnard T , Turner S , Tworek H , Uakkas S , Vraga E , Wardle C , Wasserman H , Wilhelm E , Würz A , Yau B , Zhou L , Purnat TD . JMIR Infodemiology 2021 1 (1) e30979 |
Divergent Rabies Virus Variant of Probable Bat Origin in 2 Gray Foxes, New Mexico, USA.
Condori Rene E, Aragon Adam, Breckenridge Mike, Pesko Kendra, Mower Kerry, Ettestad Paul, Melman Sandra, Velasco-Villa Andres, Orciari Lillian A, Yager Pamela, Streicker Daniel G, Gigante Crystal M, Morgan Clint, Wallace Ryan, Li Yu. Emerging infectious diseases 2022 28(6) 1137-1145 . Emerging infectious diseases 2022 28(6) 1137-1145 |
Using Neisseria meningitidis genomic diversity to inform outbreak strain identification.
Retchless AC , Chen A , Chang HY , Blain AE , McNamara LA , Mustapha MM , Harrison LH , Wang X . PLoS Pathog 2021 17 (5) e1009586 |
Genetic Diversity of Meningococcal Serogroup B Vaccine Antigens among Carriage Isolates Collected from Students at Three Universities in the United States, 2015-2016.
Marjuki H , Chang HY , Topaz N , Whaley MJ , Vuong J , Chen A , Jenkins LT , Hu F , Schmink S , Retchless AC , Thomas JD , Acosta AM , McNamara LA , Soeters HM , Mbaeyi S , Wang X . mBio 2021 12 (3) |
Early introductions and transmission of SARS-CoV-2 variant B.1.1.7 in the United States.
Alpert T , Brito AF , Lasek-Nesselquist E , Rothman J , Valesano AL , MacKay MJ , Petrone ME , Breban MI , Watkins AE , Vogels CBF , Kalinich CC , Dellicour S , Russell A , Kelly JP , Shudt M , Plitnick J , Schneider E , Fitzsimmons WJ , Khullar G , Metti J , Dudley JT , Nash M , Beaubier N , Wang J , Liu C , Hui P , Muyombwe A , Downing R , Razeq J , Bart SM , Grills A , Morrison SM , Murphy S , Neal C , Laszlo E , Rennert H , Cushing M , Westblade L , Velu P , Craney A , Cong L , Peaper DR , Landry ML , Cook PW , Fauver JR , Mason CE , Lauring AS , St George K , MacCannell DR , Grubaugh ND . Cell 2021 184 (10) 2595-2604 e13 |
Acquisition of ciprofloxacin resistance among an expanding clade of β-lactamase positive, serogroup Y Neisseria meningitidis in the United States.
Potts CC , Retchless AC , McNamara LA , Marasini D , Reese N , Swint S , Hu F , Sharma S , Blain AE , Lonsway D , Karlsson M , Hariri S , Fox LM , Wang X . Clin Infect Dis 2021 73 (7) 1185-1193 |
Simultaneous detection and differentiation of clinically relevant relapsing fever
Dietrich EA , Replogle AJ , Sheldon SW , Petersen JM . J Clin Microbiol 2021 59 (7) e0298120 |
State-level prevalence estimates of latent tuberculosis infection in the United States by medical risk factors, demographic characteristics and nativity.
Mirzazadeh A , Kahn JG , Haddad MB , Hill AN , Marks SM , Readhead A , Barry PM , Flood J , Mermin JH , Shete PB . PLoS One 2021 16 (4) e0249012 |
Borrelia burgdorferi and Borrelia miyamotoi seroprevalence in California blood donors.
Brummitt SI , Kjemtrup AM , Harvey DJ , Petersen JM , Sexton C , Replogle A , Packham AE , Bloch EM , Barbour AG , Krause PJ , Green V , Smith WA . PLoS One 2020 15 (12) e0243950 |
Web-Based Genome Analysis of Bacterial Meningitis Pathogens for Public Health Applications Using the Bacterial Meningitis Genomic Analysis Platform (BMGAP).
Buono SA , Kelly RJ , Topaz N , Retchless AC , Silva H , Chen A , Ramos E , Doho G , Khan AN , Okomo-Adhiambo MA , Hu F , Marasini D , Wang X . Front Genet 2020 11 601870 |
Population genomic evidence that human and animal infections in Africa come from the same populations of Dracunculus medinensis.
Durrant Caroline, Thiele Elizabeth A, Holroyd Nancy, Doyle Stephen R, Sallé Guillaume, Tracey Alan, Sankaranarayanan Geetha, Lotkowska Magda E, Bennett Hayley M, Huckvale Thomas, Abdellah Zahra, Tchindebet Ouakou, Wossen Mesfin, Logora Makoy Samuel Yibi, Coulibaly Cheick Oumar, Weiss Adam, Schulte-Hostedde Albrecht I, Foster Jeremy M, Cleveland Christopher A, Yabsley Michael J, Ruiz-Tiben Ernesto, Berriman Matthew, Eberhard Mark L, Cotton James A. PLoS neglected tropical diseases 2020 Nov 14(11) e0008623 . PLoS neglected tropical diseases 2020 Nov 14(11) e0008623 |
Cryptic transmission of SARS-CoV-2 in Washington state.
Bedford T , Greninger AL , Roychoudhury P , Starita LM , Famulare M , Huang ML , Nalla A , Pepper G , Reinhardt A , Xie H , Shrestha L , Nguyen TN , Adler A , Brandstetter E , Cho S , Giroux D , Han PD , Fay K , Frazar CD , Ilcisin M , Lacombe K , Lee J , Kiavand A , Richardson M , Sibley TR , Truong M , Wolf CR , Nickerson DA , Rieder MJ , Englund JA , Hadfield J , Hodcroft EB , Huddleston J , Moncla LH , Müller NF , Neher RA , Deng X , Gu W , Federman S , Chiu C , Duchin JS , Gautom R , Melly G , Hiatt B , Dykema P , Lindquist S , Queen K , Tao Y , Uehara A , Tong S , MacCannell D , Armstrong GL , Baird GS , Chu HY , Shendure J , Jerome KR . Science 2020 370 (6516) 571-575 |
Full Molecular Typing of Neisseria meningitidis Directly from Clinical Specimens for Outbreak Investigation.
Itsko M , Retchless AC , Joseph SJ , Turner AN , Bazan JA , Sadji AY , Ouédraogo-Traoré R , Wang X . J Clin Microbiol 2020 58 (12) |
Human Monoclonal Antibody Derived from Transchromosomic (Tc) Cattle Neutralizes Multiple H1 Clades of Influenza A Virus by Recognizing a Novel Conformational Epitope in the HA Head Domain.
Gao R , Sreenivasan CC , Sheng Z , Hause BM , Zhou B , Wentworth DE , Clement T , Rausch D , Brunick C , Christopher-Hennings J , Wu H , Bausch CL , Sullivan EJ , Hoppe AD , Huber VC , Wang D , Li F . J Virol 2020 94 (22) |
Probabilistic reconstruction of measles transmission clusters from routinely collected surveillance data.
Robert A , Kucharski AJ , Gastanaduy PA , Paul P , Funk S . J R Soc Interface 2020 17 (168) 20200084 |
Carriage of Neisseria meningitidis in men who have sex with men presenting to public sexual health clinics, New York City.
Ngai S , Weiss D , Bell JA , Majrud D , Zayas G , Crawley A , Kornblum J , Rodriguez-Rivera LD , Quinlan T , Halse TA , Retchless AC , MacNeil J , Pathela P . Sex Transm Dis 2020 47 (8) 541-548 |
Detection of Ciprofloxacin-Resistant, β-Lactamase-Producing Neisseria meningitidis Serogroup Y Isolates - United States, 2019-2020.
McNamara LA , Potts C , Blain AE , Retchless AC , Reese N , Swint S , Lonsway D , Karlsson M , Lunquest K , Sweitzer JJ , Wang X , Hariri S , Fox LM . MMWR Morb Mortal Wkly Rep 2020 69 (24) 735-739 |
Tracing the Evolutionary History and Global Expansion of Candida auris Using Population Genomic Analyses.
Chow NA , Munoz JF , Gade L , Berkow EL , Li X , Welsh RM , Forsberg K , Lockhart SR , Adam R , Alanio A , Alastruey-Izquierdo A , Althawadi S , Arauz AB , Ben-Ami R , Bharat A , Calvo B , Desnos-Ollivier M , Escandon P , Gardam D , Gunturu R , Heath CH , Kurzai O , Martin R , Litvintseva AP , Cuomo CA . mBio 2020 11 (2) |
Shigella sonnei Outbreak Investigation During a Municipal Water Crisis-Genesee and Saginaw Counties, Michigan, 2016.
McClung RP , Karwowski M , Castillo C , McFadden J , Collier S , Collins J , Soehnlen M , Dietrich S , Trees E , Wilt G , Harrington C , Miller A , Adam E , Reses H , Cope J , Fullerton K , Hill V , Yoder J . Am J Public Health 2020 110 (6) e1-e8 |
Genetic Characterization of Mumps Viruses Associated with the Resurgence of Mumps in the United States: 2015-2017.
McNall RJ , Wharton AK , Anderson R , Clemmons N , Lopareva EN , Gonzalez C , Espinosa A , Probert WS , Hacker JK , Liu G , Garfin J , Strain A , Boxrud D , Bryant PW , George KS , Davis T , Griesser RH , Shult P , Bankamp B , Hickman CJ , Wroblewski K , Rota PA . Virus Res 2020 281 197935 |
Global update on the susceptibilities of human influenza viruses to neuraminidase inhibitors and the cap-dependent endonuclease inhibitor baloxavir, 2017-2018.
Takashita E , Daniels RS , Fujisaki S , Gregory , Gubareva LV , Huang W , Hurt AC , Lackenby A , Nguyen HT , Pereyaslov D , Roe M , Samaan M , Subbarao K , Tse H , Wang D , Yen H-L , Zhang W , Meijer A . Antiviral Res 2020 175 104718-104718 |
Evolutionary superscaffolding and chromosome anchoring to improve Anopheles genome assemblies.
Waterhouse RM , Aganezov S , Anselmetti Y , Lee J , Ruzzante L , Reijnders Mjmf , Feron R , Berard S , George P , Hahn MW , Howell PI , Kamali M , Koren S , Lawson D , Maslen G , Peery A , Phillippy AM , Sharakhova MV , Tannier E , Unger MF , Zhang SV , Alekseyev MA , Besansky NJ , Chauve C , Emrich SJ , Sharakhov IV . BMC Biol 2020 18 (1) 1 |
Replacement of neuraminidase inhibitor susceptible influenza A(H1N1) with resistant phenotype in 2008 and circulation of susceptible influenza A and B viruses during 2009-2013, South Africa.
Treurnicht FK , Buys A , Tempia S , Seleka M , Cohen AL , Walaza S , Glass AJ , Rossouw I , McAnerney J , Blumberg L , Cohen C , Venter M . Influenza Other Respir Viruses 2019 13 (1) 54-63 |
A New Sequence Type of Neisseria meningitidis Serogroup C Associated With a 2016 Meningitis Outbreak in Mali.
Sanogo YO , Guindo I , Diarra S , Retchless AC , Abdou M , Coulibaly S , Maiga MF , Coumare M , Diarra B , Chen A , Chang HY , Vuong JT , Acosta AM , Sow S , Novak RT , Wang X . J Infect Dis 2019 220 S190-s197 |
Toward a Global Genomic Epidemiology of Meningococcal Disease.
Retchless AC , Fox LM , Maiden MCJ , Smith V , Harrison LH , Glennie L , Harrison OB , Wang X . J Infect Dis 2019 220 S266-s273 |
Genomic characterization of Haemophilus influenzae: a focus on the capsule locus.
Potts CC , Topaz N , Rodriguez-Rivera LD , Hu F , Chang HY , Whaley MJ , Schmink S , Retchless AC , Chen A , Ramos E , Doho GH , Wang X . BMC Genomics 2019 20 (1) 733 |
The efficacy of dihydroartemisinin-piperaquine and artemether-lumefantrine with and without primaquine on Plasmodium vivax recurrence: A systematic review and individual patient data meta-analysis.
Commons RJ , Simpson JA , Thriemer K , Abreha T , Adam I , Anstey NM , Assefa A , Awab GR , Baird JK , Barber BE , Chu CS , Dahal P , Daher A , Davis TME , Dondorp AM , Grigg MJ , Humphreys GS , Hwang J , Karunajeewa H , Laman M , Lidia K , Moore BR , Mueller I , Nosten F , Pasaribu AP , Pereira DB , Phyo AP , Poespoprodjo JR , Sibley CH , Stepniewska K , Sutanto I , Thwaites G , Hien TT , White NJ , William T , Woodrow CJ , Guerin PJ , Price RN . PLoS Med 2019 16 (10) e1002928 |
Distribution of Neisseria meningitidis serogroup B (NmB) vaccine antigens in meningococcal disease causing isolates in the United States during 2009-2014, prior to NmB vaccine licensure.
Chang HY , Vuong J , Hu F , Liberator P , Chen A , Kretz CB , Blain A , Hao L , Retchless AC , Whaley MJ , Anderson AS , Wang X . J Infect 2019 79 (5) 426-434 |
Patterns of inter- and intrasubspecific homologous recombination inform eco-evolutionary dynamics of Xylella fastidiosa.
Potnis N , Kandel PP , Merfa MV , Retchless AC , Parker JK , Stenger DC , Almeida RPP , Bergsma-Vlami M , Westenberg M , Cobine PA , De La Fuente L . ISME J 2019 13 (9) 2319-2333 |
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