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CDC-Authored Genomics and Precision Health Publications Database|Home|PHGKB

CDC-Authored Genomics and Precision Health Publications Database


Last data update: Jun 16, 2021. (Total: 3331 publications since 2011)
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Records 1-30 (of 3331 Records)
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Secretor status strongly influences the incidence of symptomatic norovirus infection in a genotype-dependent manner in a Nicaraguan birth cohort.
Yaoska Reyes, Fredman González, Lester Gutierrez, Patricia Blandon, Edwing Centeno, Omar Zepeda, Christian Toval-Ruíz, Lisa C Lindesmith, Ralph S Baric, Nadja Vielot, Marta Diez-Valcarce, Jan Vinjé, Lennart Svensson, Sylvia Becker-Dreps, Johan Nordgren, and Filemón Bucardo
The Journal of infectious diseases 2021
Comparison of Symptoms and RNA Levels in Children and Adults With SARS-CoV-2 Infection in the Community Setting.
Erin Chung, Eric J Chow, Naomi C Wilcox, Roy Burstein, Elisabeth Brandstetter, Peter D Han, Kairsten Fay, Brian Pfau, Amanda Adler, Kirsten Lacombe, Christina M Lockwood, Timothy M Uyeki, Jay Shendure, Jeffrey S Duchin, Mark J Rieder, Deborah A Nickerson, Michael Boeckh, Michael Famulare, James P Hughes, Lea M Starita, Trevor Bedford, Janet A Englund, and Helen Y Chu
JAMA pediatrics 2021
Cost or price of sequencing? Implications for economic evaluations in genomic medicine.
Scott D Grosse, and James M Gudgeon
Genetics in medicine : official journal of the American College of Medical Genetics 2021
Genomic Surveillance for SARS-CoV-2 Variants Circulating in the United States, December 2020-May 2021.
Prabasaj Paul, Anne Marie France, Yutaka Aoki, Dhwani Batra, Matthew Biggerstaff, Vivien Dugan, Summer Galloway, Aron J Hall, Michael A Johansson, Rebecca J Kondor, Alison Laufer Halpin, Brian Lee, Justin S Lee, Brandi Limbago, Adam MacNeil, Duncan MacCannell, Clinton R Paden, Krista Queen, Heather E Reese, Adam C Retchless, Rachel B Slayton, Molly Steele, Suxiang Tong, Maroya S Walters, David E Wentworth, and Benjamin J Silk
MMWR. Morbidity and mortality weekly report 2021 70(23) 846-850
Functional analysis of colonization factor antigen I positive enterotoxigenic Escherichia coli identifies genes implicated in survival in water and host colonization.
Moataz Abd El Ghany, Lars Barquist, Simon Clare, Cordelia Brandt, Matthew Mayho, Enrique Joffre, Åsa Sjöling, A Keith Turner, John D Klena, Robert A Kingsley, Grant A Hill-Cawthorne, Gordon Dougan, and Derek Pickard
Microbial genomics 2021 7(6)
SARS-CoV-2 Variants of Interest and Concern naming scheme conducive for global discourse.
Frank Konings, Mark D Perkins, Jens H Kuhn, Mark J Pallen, Erik J Alm, Brett N Archer, Amal Barakat, Trevor Bedford, Jinal N Bhiman, Leon Caly, Lisa L Carter, Anne Cullinane, Tulio de Oliveira, Julian Druce, Ihab El Masry, Roger Evans, George F Gao, Alexander E Gorbalenya, Esther Hamblion, Belinda L Herring, Emma Hodcroft, Edward C Holmes, Manish Kakkar, Shagun Khare, Marion P G Koopmans, Bette Korber, Juliana Leite, Duncan MacCannell, Marco Marklewitz, Sebastian Maurer-Stroh, Jairo Andres Mendez Rico, Vincent J Munster, Richard Neher, Bas Oude Munnink, Boris I Pavlin, Malik Peiris, Leo Poon, Oliver Pybus, Andrew Rambaut, Paola Resende, Lorenzo Subissi, Volker Thiel, Suxiang Tong, Sylvie van der Werf, Anne von Gottberg, John Ziebuhr, and Maria D Van Kerkhove
Nature microbiology 2021
Constraining PERMANOVA and LDM to within-set comparisons by projection improves the efficiency of analyses of matched sets of microbiome data.
Zhengyi Zhu, Glen A Satten, Caroline Mitchell, and Yi-Juan Hu
Microbiome 2021 9(1) 133
Genomic analysis of Clostridioides difficile in two regions of the United States reveals a diversity of strains and limited transmission.
Nicole Pecora, Stacy Holzbauer, Xiong Wang, Yu Gu, Samantha Taffner, Trupti Hatwar, Dwight Hardy, Michelle Dziejman, Paige D'Heilly, Kelly Pung, Alice Guh, Xing Qiu, Steven Gill, and Ghinwa Dumyati
The Journal of infectious diseases 2021
Mapathons versus automated feature extraction: a comparative analysis for strengthening immunization microplanning.
Amalia Mendes, Tess Palmer, Andrew Berens, Julie Espey, Rhiannan Price, Apoorva Mallya, Sidney Brown, Maureen Martinez, Noha Farag, and Brian Kaplan
International journal of health geographics 2021 20(1) 27
Aspergillus versicolor Inhalation Triggers Neuroimmune, Glial, and Neuropeptide Transcriptional Changes.
Thatcher B Ladd, James A Johnson, Christen L Mumaw, Hendrik J Greve, Xiaoling Xuei, Ed Simpson, Mark A Barnes, Brett J Green, Tara L Croston, Chandrama Ahmed, Angela Lemons, Donald H Beezhold, and Michelle L Block
ASN neuro 2021 1317590914211019886
Molecular epidemiology of carbapenem-resistant Enterobacterales in Thailand, 2016-2018.
Wantana Paveenkittiporn, Meghan Lyman, Caitlin Biedron, Nora Chea, Charatdao Bunthi, Amy Kolwaite, and Noppavan Janejai
Antimicrobial resistance and infection control 2021 10(1) 88
Klebsiella spp. cause severe and fatal disease in Mozambican children: antimicrobial resistance profile and molecular characterization.
Arsénia J Massinga, Marcelino Garrine, Augusto Messa, Nélio A Nobela, Nadia Boisen, Sergio Massora, Anélsio Cossa, Rosauro Varo, António Sitoe, Juan Carlos Hurtado, Jaume Ordi, Hélio Mucavele, Tacilta Nhampossa, Robert F Breiman, Cynthia G Whitney, Dianna M Blau, Quique Bassat, and Inácio Mandomando
BMC infectious diseases 2021 21(1) 526
Framing Bacterial Genomics for Public Health(care).
Alison Laufer Halpin, L Clifford McDonald, and Christopher A Elkins
Journal of clinical microbiology 2021 JCM0013521
Influenza Virus-Induced Novel miRNAs Regulate the STAT Pathway.
Sreekumar Othumpangat, Donald H Beezhold, Christina M Umbright, and John D Noti
Viruses 2021 13(6)
SARS-CoV-2 Infections and Viral Isolations among Serially Tested Cats and Dogs in Households with Infected Owners in Texas, USA.
Sarah A Hamer, Alex Pauvolid-Corrêa, Italo B Zecca, Edward Davila, Lisa D Auckland, Christopher M Roundy, Wendy Tang, Mia Kim Torchetti, Mary Lea Killian, Melinda Jenkins-Moore, Katie Mozingo, Yao Akpalu, Ria R Ghai, Jessica R Spengler, Casey Barton Behravesh, Rebecca S B Fischer, and Gabriel L Hamer
Viruses 2021 13(5)
MiR-378b Modulates Chlamydia-Induced Upper Genital Tract Pathology.
Stephanie R Lundy, Kobe Abney, Debra Ellerson, Joseph U Igietseme, Darin Carroll, Francis O Eko, and Yusuf O Omosun
Pathogens (Basel, Switzerland) 2021 10(5)
Whole gene analysis of a genotype G29P[6] human rotavirus strain identified in Central African Republic.
Virginie Banga-Mingo, Mathew D Esona, Naga S Betrapally, Rashi Gautam, Jose Jaimes, Eric Katz, Diane Waku-Kouomou, Michael D Bowen, and Ionela Gouandjika-Vasilache
BMC research notes 2021 14(1) 218
Comparative neurotranscriptomics reveal widespread species differences associated with bonding.
Joel A Tripp, Alejandro Berrio, Lisa A McGraw, Mikhail V Matz, Jamie K Davis, Kiyoshi Inoue, James W Thomas, Larry J Young, and Steven M Phelps
BMC genomics 2021 22(1) 399
Antibiotic Testing and Successful Treatment of Hospitalized Patients with Extensively Drug-Resistant (XDR) Campylobacter jejuni Infections Linked to a Pet Store Puppy Outbreak.
Dheeraj Goyal, Louise K Francois Watkins, Martha P Montgomery, Sonya M Bodeis Jones, Hayat Caidi, and Cindy R Friedman
Journal of global antimicrobial resistance 2021
Detection of Emerging Drugs Involved in Overdose via Diachronic Word Embeddings of Substances Discussed on Social Media.
Austin P Wright, Christopher M Jones, Duen Horng Chau, R Matthew Gladden, and Steven A Sumner
Journal of biomedical informatics 2021 103824
The CDC HIV Outbreak Coordination Unit: Developing a Standardized, Collaborative Approach to HIV Outbreak Assessment and Response.
Alexandra M Oster, Anne Marie France, Robert P McClung, Kate Buchacz, Sheryl B Lyss, Philip J Peters, Paul J Weidle, William M Switzer, Stanley A Phillip, John T Brooks, and Angela L Hernandez
Public health reports (Washington, D.C. : 1974) 2021 333549211018678
Distribution and Clonality of drug-resistant tuberculosis in South Africa.
Halima Said, John Ratabane, Linda Erasmus, Yasmin Gardee, Shaheed Omar, Andries Dreyer, Farzana Ismail, Zaheda Bhyat, Tiisetso Lebaka, Minty van der Meulen, Thabisile Gwala, Adeboye Adelekan, Karidia Diallo, and Nazir Ismail
BMC microbiology 2021 21(1) 157
COVID-19 Vaccine Breakthrough Infections Reported to CDC - United States, January 1-April 30, 2021.

MMWR. Morbidity and mortality weekly report 2021 70(21) 792-793
Laboratory Detection of Malaria Antigens: a Strong Tool for Malaria Research, Diagnosis, and Epidemiology.
Mateusz Plucinski, Michael Aidoo, and Eric Rogier
Clinical microbiology reviews 2021 e0025020
Granulomatous Dermatitis Associated With Rubella Virus Infection in an Adult With Immunodeficiency.
Bridget E Shields, Ludmila Perelygina, Sara Samimi, Paul Haun, Thomas Leung, Emily Abernathy, Min-Hsin Chen, Lijuan Hao, Joseph Icenogle, Beth Drolet, Barbara Wilson, Joshua S Bryer, Ross England, Emily Blumberg, Karolyn A Wanat, Kathleen Sullivan, and Misha Rosenbach
JAMA dermatology 2021
Therapeutic efficacy of artemether-lumefantrine and artesunate-amodiaquine for the treatment of uncomplicated Plasmodium falciparum malaria in Mali, 2015-2016.
Youssouf Diarra, Oumar Koné, Lansana Sangaré, Lassina Doumbia, Dade Bouye Ben Haidara, Mouctar Diallo, Ababacar Maiga, Hamadoun A Sango, Halidou Sidibé, Jules Mihigo, Douglas Nace, Dragan Ljolje, Eldin Talundzic, Venkatachalam Udhayakumar, Erin Eckert, Celia J Woodfill, Leah F Moriarty, Pharath Lim, Donald J Krogstad, Eric S Halsey, Naomi W Lucchi, and Ousmane A Koita
Malaria journal 2021 20(1) 235
Characterization of Reference Materials for CYP2C9, CYP2C19, VKORC1, CYP2C Cluster Variant, GGCX, and Other Pharmacogenetic Alleles with an Association for Molecular Pathology (AMP) Pharmacogenetics Working Group Tier 2 Status - A GeT-RM Collaborative Project.
Victoria M Pratt, Amy Turner, Ulrich Broeckel, D Brian Dawson, Andrea Gaedigk, Ty C Lynnes, Elizabeth B Medeiros, Ann M Moyer, Deborah Requesens, Francesco Ventrini, and Lisa V Kalman
The Journal of molecular diagnostics : JMD 2021
Isolation and characterization of novel reassortant mammalian orthoreovirus from pigs in the United States.
Liping Wang, Yan Li, Timothy Walsh, Zhenyu Shen, Yonghai Li, Nirmalendu Deb Nath, Jinhwa Lee, Baoliang Zheng, Ying Tao, Clinton R Paden, Krista Queen, Shuping Zhang, Suxiang Tong, and Wenjun Ma
Emerging microbes & infections 2021 1-43
Chromosome-Level Genome Sequence of Leishmania (Leishmania) tropica Strain CDC216-162, Isolated from an Afghanistan Clinical Case.
Yvette Unoarumhi, Dhwani Batra, Mili Sheth, Vidhya Narayanan, Wuling Lin, Yueli Zheng, Lori A Rowe, Jan Pohl, and Marcos de Almeida
Microbiology resource announcements 2021 10(20)
Proposal for Human Respiratory Syncytial Virus Nomenclature below the Species Level.
Vahid Salimi, Mariana Viegas, Alfonsina Trento, Charles N Agoti, Larry J Anderson, Vasanthi Avadhanula, Justin Bahl, Louis Bont, J Rodney Brister, Patricia A Cane, Mónica Galiano, Barney S Graham, Eneida L Hatcher, Orienka Hellferscee, David M Henke, Siddhivinayak Hirve, Sandra Jackson, Els Keyaerts, Leyla Kragten-Tabatabaie, Stephen Lindstrom, Inne Nauwelaers, D James Nokes, Peter J Openshaw, Teresa C Peret, Pedro A Piedra, Kaat Ramaekers, Annabel Rector, Nídia Sequeira Trovão, Anne von Gottberg, Maria Zambon, Wenqing Zhang, Thomas C Williams, Ian G Barr, and Ursula J Buchholz
Emerging infectious diseases 2021 27(6) 1-9
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