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Last data update: Feb 7, 2019. (Total: 2221 publications since 2011)
| Query Trace: all records[orginal query] |
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| Ten years of Genome Medicine. Charles Auffray, Julian L Griffin, Muin J Khoury, James R Lupski, and Matthias Schwab Genome medicine 2019 Feb 11(1) 7 |
| Therapeutic Options for Neuroendocrine Tumors: A Systematic Review and Network Meta-analysis. Reto M Kaderli, Marko Spanjol, Attila Kollár, Lukas Bütikofer, Viktoria Gloy, Rebecca A Dumont, Christian A Seiler, Emanuel R Christ, Piotr Radojewski, Matthias Briel, and Martin A Walter JAMA oncology 2019 Feb |
| Next-Generation Sequencing of Infectious Pathogens. Marta Gwinn, Duncan MacCannell, and Gregory L Armstrong JAMA 2019 Feb |
| Using deep learning to identify translational research in genomic medicine beyond bench to bedside. Yi-Yu Hsu, Mindy Clyne, Chih-Hsuan Wei, Muin J Khoury, and Zhiyong Lu Database : the journal of biological databases and curation 2019 Jan 2019 |
| Comparison of FTD® respiratory pathogens 33 and a singleplex CDC assay for the detection of respiratory viruses: A study from Cameroon. Sebastien Kenmoe, Clarisse Tcharnenwa, Gwladys C Monamele, Cyprien Nde Kengne, Mohamadou Njankouo Ripa, Brett Whitaker, Karen A Alroy, S Arunmozhi Balajee, and Richard Njouom Diagnostic microbiology and infectious disease 2019 Jan |
| Platforms and Analytical Tools Used in Nucleic Acid Sequence-Based Microbial Genotyping Procedures. Duncan MacCannell Microbiology spectrum 2019 Jan 7(1) |
| Draft Genome Sequence of a Clostridium botulinum Isolate from Thailand Harboring the Subtype bont /B8 Gene. Jessica L Halpin, Piyada Wangroongsarb, Chutima Jittaprasartsin, Janet K Dykes, and Carolina Lúquez Microbiology resource announcements 2019 Jan 8(5) |
| miRNA-378a as a key regulator of cardiovascular health following engineered nanomaterial inhalation exposure. Quincy A Hathaway, Andrya J Durr, Danielle L Shepherd, Mark V Pinti, Ashley N Brandebura, Cody E Nichols, Amina Kunovac, William T Goldsmith, Sherri A Friend, Alaeddin B Abukabda, Garrett K Fink, Timothy R Nurkiewicz, and John M Hollander Nanotoxicology 2019 Feb 1-20 |
| Evaluation of Multilocus Sequence Typing of Cyclospora cayetanensis based on microsatellite markers. Jessica N Hofstetter, Fernanda S Nascimento, Subin Park, Shannon Casillas, Barbara L Herwaldt, Michael J Arrowood, and Yvonne Qvarnstrom Parasite (Paris, France) 2019 263 |
| Draft Genome Sequences for Dual-Toxin-Producing Clostridium botulinum Strains. Jessica L Halpin, Janet K Dykes, and Carolina Lúquez Microbiology resource announcements 2019 Jan (4) |
| Contrasting patterns of gene expression indicate differing pyrethroid resistance mechanisms across the range of the New World malaria vector Anopheles albimanus. Lucy Mackenzie-Impoinvil, Gareth D Weedall, Juan C Lol, Jesús Pinto, Lucrecia Vizcaino, Nicole Dzuris, Jacob Riveron, Norma Padilla, Charles Wondji, and Audrey Lenhart PloS one 2019 (1) e0210586 |
| Vgsc-interacting proteins are genetically associated with pyrethroid resistance in Aedes aegypti. Corey L Campbell, Karla Saavedra-Rodriguez, Tristan D Kubik, Audrey Lenhart, Saul Lozano-Fuentes, and William C Black PloS one 2019 14(1) e0211497 |
| Precision Medicine vs Preventive Medicine. Muin J Khoury JAMA 2019 321(4) 406 |
| Coccidioides ecology and genomics. Bridget M Barker, Anastasia P Litvintseva, Meritxell Riquelme, and Lluvia Vargas-Gastélum Medical mycology 2019 Feb (Supplement_1) S21-S29 |
| Update on the Epidemiology of coccidioidomycosis in the United States. Orion Z McCotter, Kaitlin Benedict, David M Engelthaler, Ken Komatsu, Kimberley D Lucas, Janet C Mohle-Boetani, Hanna Oltean, Duc Vugia, Tom M Chiller, Gail L Sondermeyer Cooksey, Alyssa Nguyen, Chandler C Roe, Charlotte Wheeler, and Rebecca Sunenshine Medical mycology 2019 Feb 57(Supplement_1) S30-S40 |
| Draft Genome Sequences of Eight Vibrio sp. Clinical Isolates from across the United States That Form a Basal Sister Clade to Vibrio cholerae. Kevin Liang, Mohammad Tarequl Islam, Nora Hussain, Nathan S Winkjer, Monica S Im, Lori A Rowe, Cheryl L Tarr, and Yan Boucher Microbiology resource announcements 2019 Jan 8(3) |
| Complete Genome Sequence of Nocardia farcinica W6977 T Obtained by Combining Illumina and PacBio Reads. Christopher A Gulvik, Robert A Arthur, Ben W Humrighouse, Dhwani Batra, Lori A Rowe, Brent A Lasker, and John R McQuiston Microbiology resource announcements 2019 Jan (3) |
| Initiation of Pulmonary Fibrosis after Silica Inhalation in Rats is linked with Dysfunctional Shelterin Complex and DNA Damage Response. Mohammad Shoeb, Gul M Mustafa, Pius Joseph, Christina Umbright, Vamsi Kodali, Katherine A Roach, Terence Meighan, Jenny R Roberts, Aaron Erdely, and James M Antonini Scientific reports 2019 Jan 9(1) 471 |
| Notes from the Field: Outbreak of Listeriosis Likely Associated with Prepackaged Caramel Apples - United States, 2017. Jessica R Marus, Sally Bidol, Shana M Altman, Oluwakemi Oni, Nicole Parker-Strobe, Mark Otto, Evelyn Pereira, Annemarie Buchholz, Jasmine Huffman, Amanda R Conrad, and Matthew E Wise MMWR. Morbidity and mortality weekly report 2019 01 (3) 76-77 |
| First Laboratory-Confirmed Outbreak of Human and Animal Rift Valley Fever Virus in Uganda in 48 Years. Trevor R Shoemaker, Luke Nyakarahuka, Stephen Balinandi, Joseph Ojwang, Alex Tumusiime, Sophia Mulei, Jackson Kyondo, Bernard Lubwama, Musa Sekematte, Annemarion Namutebi, Patrick Tusiime, Fred Monje, Martin Mayanja, Steven Ssendagire, Melissa Dahlke, Simon Kyazze, Milton Wetaka, Issa Makumbi, Jeff Borchert, Sara Zufan, Ketan Patel, Shannon Whitmer, Shelley Brown, William G Davis, John D Klena, Stuart T Nichol, Pierre E Rollin, and Julius Lutwama The American journal of tropical medicine and hygiene 2019 Jan |
| Streptococcus infantis, Streptococcus mitis , and Streptococcus oralis Strains With Highly Similar cps5 Loci and Antigenic Relatedness to Serotype 5 Pneumococci. Fabiana Pimenta, Robert E Gertz, So Hee Park, Ellie Kim, Iaci Moura, Jennifer Milucky, Nadine Rouphael, Monica M Farley, Lee H Harrison, Nancy M Bennett, Godfrey Bigogo, Daniel R Feikin, Robert Breiman, Fernanda C Lessa, Cynthia G Whitney, Gowrisankar Rajam, Jarad Schiffer, Maria da Gloria Carvalho, and Bernard Beall Frontiers in microbiology 2018 3199 |
| Assessing baloxavir susceptibility of influenza viruses circulating in the United States during the 2016/17 and 2017/18 seasons. Larisa V Gubareva, Vasiliy P Mishin, Mira C Patel, Anton Chesnokov, Ha T Nguyen, Juan De La Cruz, Sarah Spencer, Angela P Campbell, Mallory Sinner, Heather Reid, Rebecca Garten, Jackie M Katz, Alicia M Fry, John Barnes, and David E Wentworth Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin 2019 Jan (3) |
| Group A Streptococcus outbreak among residents and employees of two skilled nursing facilities: North Carolina, 2017. Katie J Palladino, Tammra Morrison, Sopio Chochua, Lori Bowers, and Jennifer K MacFarquhar American journal of infection control 2019 Jan |
| Genetic Meningococcal Antigen Typing System (gMATS): A genotyping tool that predicts 4CMenB strain coverage worldwide. Alessandro Muzzi, Alessandro Brozzi, Laura Serino, Margherita Bodini, Raquel Abad, Dominique Caugant, Maurizio Comanducci, Ana Paula Lemos, Maria Cecilia Gorla, Pavla Krížová, Claudia Mikula, Robert Mulhall, Michael Nissen, Hanna Nohynek, Maria João Simões, Anna Skoczynska, Paola Stefanelli, Muhamed-Kheir Taha, Maija Toropainen, Georgina Tzanakaki, Kumaran Vadivelu-Pechai, Philip Watson, Julio A Vazquez, Gowrisankar Rajam, Rino Rappuoli, Ray Borrow, and Duccio Medini Vaccine 2019 Feb 37(7) 991-1000 |
| Crimean-Congo hemorrhagic fever and expansion from endemic regions. Jessica R Spengler, Éric Bergeron, and Christina F Spiropoulou Current opinion in virology 2019 Jan 70-78 |
| Simultaneous extraction of mRNA and microRNA from whole blood stabilized in tempus tubes. Jendai Richards, Elizabeth R Unger, and Mangalathu S Rajeevan BMC research notes 2019 Jan (1) 39 |
| A genome-wide CRISPR screen identifies N-acetylglucosamine-1-phosphate transferase as a potential antiviral target for Ebola virus. Mike Flint, Payel Chatterjee, David L Lin, Laura K McMullan, Punya Shrivastava-Ranjan, Éric Bergeron, Michael K Lo, Stephen R Welch, Stuart T Nichol, Andrew W Tai, and Christina F Spiropoulou Nature communications 2019 Jan 10(1) 285 |
| A real-time multiplex PCR assay for detection of Elizabethkingia species, and differentiating between E. anophelis and E. meningoseptica . Aubree J Kelly, Sandor E Karpathy, Christopher A Gulvik, Melissa L Ivey, Anne M Whitney, Melissa E Bell, Ainsley C Nicholson, Ben H Humrighouse, and John R McQuiston Journal of clinical microbiology 2019 Jan |
| Complete Genome Sequences of Four Salmonella enterica Strains (Including Those of Serotypes Montevideo, Mbandaka, and Lubbock) Isolated from Peripheral Lymph Nodes of Healthy Cattle. Marie Bugarel, Peter W Cook, Henk C den Bakker, Dayna Harhay, Kendra K Nightingale, and Guy H Loneragan Microbiology resource announcements 2019 Jan (2) |
| Genome Sequences of Penicillin-Resistant Bacillus anthracis Strains. Amy S Gargis, Christine Lascols, Heather P McLaughlin, Andrew B Conley, Alex R Hoffmaster, and David Sue Microbiology resource announcements 2019 Jan (2) |
| Genome-wide association analyses of invasive pneumococcal isolates identify a missense bacterial mutation associated with meningitis. Yuan Li, Benjamin J Metcalf, Sopio Chochua, Zhongya Li, Hollis Walker, Theresa Tran, Paulina A Hawkins, Ryan Gierke, Tamara Pilishvili, Lesley McGee, and Bernard W Beall Nature communications 2019 Jan (1) 178 |
| Evaluation of rapid and sensitive DNA extraction methods for detection of cytomegalovirus in dried blood spots. D Koontz, S Dollard, and S Cordovado Journal of virological methods 2019 Mar 117-120 |
| Determining the Cause of Death Among Children Hospitalized With Respiratory Illness in Kenya: Protocol for Pediatric Respiratory Etiology Surveillance Study (PRESS). Henry N Njuguna, Sherif R Zaki, Drucilla J Roberts, Corinne L Fligner, M Kelly Keating, Emily Rogena, Edwin Walong, Andrew K Gachii, Elizabeth Maleche-Obimbo, Grace Irimu, John Mathaiya, Noelle Orata, Rosemarie Lopokoiyit, Jackson Maina, Gideon O Emukule, Clayton O Onyango, Stella Gikunju, Collins Owuor, Peter Kinuthia, Milka Bunei, Barry Fields, Marc-Alain Widdowson, Joshua A Mott, and Sandra S Chaves JMIR research protocols 2019 Jan (1) e10854 |
| Probing the impact of nairovirus genomic diversity on viral ovarian tumor domain protease (vOTU) structure and deubiquitinase activity. John V Dzimianski, Brianna S Beldon, Courtney M Daczkowski, Octavia Y Goodwin, Florine E M Scholte, Éric Bergeron, and Scott D Pegan PLoS pathogens 2019 Jan 15(1) e1007515 |
| Evolution of gene expression levels in the male reproductive organs of Anopheles mosquitoes. Abril Izquierdo, Martin Fahrenberger, Tania Persampieri, Mark Q Benedict, Tom Giles, Flaminia Catteruccia, Richard D Emes, and Tania Dottorini Life science alliance 2019 Feb 2(1) e201800191 |
| The use of next generation sequencing for improving food safety: Translation into practice. Balamurugan Jagadeesan, Peter Gerner-Smidt, Marc W Allard, Sébastien Leuillet, Anett Winkler, Yinghua Xiao, Samuel Chaffron, Jos Van Der Vossen, Silin Tang, Mitsuru Katase, Peter McClure, Bon Kimura, Lay Ching Chai, John Chapman, and Kathie Grant Food microbiology 2019 Jun 96-115 |
| Colonization factors among enterotoxigenic Escherichia coli isolates from children with moderate-to-severe diarrhea and from matched controls in the Global Enteric Multicenter Study (GEMS). Roberto M Vidal, Khitam Muhsen, Sharon M Tennant, Ann-Mari Svennerholm, Samba O Sow, Dipika Sur, Anita K M Zaidi, Abu S G Faruque, Debasish Saha, Richard Adegbola, M Jahangir Hossain, Pedro L Alonso, Robert F Breiman, Quique Bassat, Boubou Tamboura, Doh Sanogo, Uma Onwuchekwa, Byomkesh Manna, Thandavarayan Ramamurthy, Suman Kanungo, Shahnawaz Ahmed, Shahida Qureshi, Farheen Quadri, Anowar Hossain, Sumon K Das, Martin Antonio, Inacio Mandomando, Tacilta Nhampossa, Sozinho Acácio, Richard Omore, John B Ochieng, Joseph O Oundo, Eric D Mintz, Ciara E O'Reilly, Lynette Y Berkeley, Sofie Livio, Sandra Panchalingam, Dilruba Nasrin, Tamer H Farag, Yukun Wu, Halvor Sommerfelt, Roy M Robins-Browne, Felipe Del Canto, Tracy H Hazen, David A Rasko, Karen L Kotloff, James P Nataro, and Myron M Levine PLoS neglected tropical diseases 2019 Jan 13(1) e0007037 |
| Rubella Virus-Associated Cutaneous Granulomatous Disease: a Unique Complication in Immune-Deficient Patients, Not Limited to DNA Repair Disorders. David Buchbinder, Fabian Hauck, Michael H Albert, Anita Rack, Shahrzad Bakhtiar, Anna Shcherbina, Elena Deripapa, Kathleen E Sullivan, Ludmila Perelygina, Marc Eloit, Bénédicte Neven, Philippe Pérot, Despina Moshous, Félipe Suarez, Christine Bodemer, Francisco A Bonilla, Louise E Vaz, Alfons L Krol, Christoph Klein, Mikko Seppanen, Diane J Nugent, Jasjit Singh, and Hans D Ochs Journal of clinical immunology 2019 Jan |
| Notes from the Field: Environmental Investigation of a Multistate Salmonellosis Outbreak Linked to Live Backyard Poultry from a Mail-Order Hatchery - Michigan, 2018. Margaret C Hardy, Scott A Robertson, Jennifer Sidge, Kimberly Signs, Mary Grace Stobierski, Kelly Jones, Marty Soehnlen, Lisa Stefanovsky, Adeline Hambley, Joshua M Brandenburg, Haley Martin, A C Lauer, Patricia Fields, Lia Koski, Lauren M Stevenson, Kristy L Pabilonia, Megin C Nichols, Colin A Basler, Efrain M Ribot, and Kelley B Hise MMWR. Morbidity and mortality weekly report 2019 Jan (5152) 1430-1431 |
| Meningococcal Disease Among College-Aged Young Adults: 2014-2016. Sarah A Mbaeyi, Sandeep J Joseph, Amy Blain, Xin Wang, Susan Hariri, and Jessica R MacNeil Pediatrics 2019 Jan 143(1) |
| Genome wide characterization of enterotoxigenic Escherichia coli serogroup O6 isolates from multiple outbreaks and sporadic infections from 1975-2016. Vaishnavi Pattabiraman, Lee S Katz, Jessica C Chen, Andre E McCullough, and Eija Trees PloS one 2018 13(12) e0208735 |
| Population-Based Assessment of HPV Genotype-Specific Cervical Cancer Survival: CDC Cancer Registry Sentinel Surveillance System. Benjamin D Hallowell, Mona Saraiya, Trevor D Thompson, Elizabeth R Unger, Charles F Lynch, Tom Tucker, Glenn Copeland, Brenda Y Hernandez, Edward S Peters, Edward Wilkinson, and Marc T Goodman JNCI cancer spectrum 2018 2(3) |
| Scope and extent of healthcare-associated Middle East respiratory syndrome coronavirus transmission during two contemporaneous outbreaks in Riyadh, Saudi Arabia, 2017. Khalid H Alanazi, Marie E Killerby, Holly M Biggs, Glen R Abedi, Hani Jokhdar, Ali A Alsharef, Mutaz Mohammed, Osman Abdalla, Aref Almari, Samar Bereagesh, Sameh Tawfik, Husain Alresheedi, Raafat F Alhakeem, Ahmed Hakawi, Haitham Alfalah, Hala Amer, Natalie J Thornburg, Azaibi Tamin, Suvang Trivedi, Suxiang Tong, Xiaoyan Lu, Krista Queen, Yan Li, Senthilkumar K Sakthivel, Ying Tao, Jing Zhang, Clinton R Paden, Hail M Al-Abdely, Abdullah M Assiri, Susan I Gerber, and John T Watson Infection control and hospital epidemiology 2019 Jan (1) 79-88 |
| Phylogenetic methods inconsistently predict direction of HIV transmission among heterosexual pairs in the HPTN052 cohort. Rebecca Rose, Matthew Hall, Andrew D Redd, Susanna Lamers, Andrew E Barbier, Stephen F Porcella, Sarah E Hudelson, Estelle Piwowar-Manning, Marybeth McCauley, Theresa Gamble, Ethan A Wilson, Johnstone Kumwenda, Mina C Hosseinipour, James G Hakim, Nagalingeswaran Kumarasamy, Suwat Chariyalertsak, Jose H Pilotto, Beatriz Grinsztejn, Lisa A Mills, Joseph Makhema, Breno R Santos, Ying Q Chen, Thomas C Quinn, Christophe Fraser, Myron S Cohen, Susan H Eshleman, and Oliver Laeyendecker The Journal of infectious diseases 2018 Dec |
| Investigation of a Cluster of Sphingomonas koreensis Infections. Ryan C Johnson, Clay Deming, Sean Conlan, Caroline J Zellmer, Angela V Michelin, ShihQueen Lee-Lin, Pamela J Thomas, Morgan Park, Rebecca A Weingarten, John Less, John P Dekker, Karen M Frank, Kimberlee A Musser, John R McQuiston, David K Henderson, Anna F Lau, Tara N Palmore, and Julia A Segre The New England journal of medicine 2018 Dec (26) 2529-2539 |
| Genotypic differences between strains of the opportunistic pathogen Corynebacterium bovis isolated from humans, cows, and rodents. Christopher Cheleuitte-Nieves, Christopher A Gulvik, John R McQuiston, Ben W Humrighouse, Melissa E Bell, Aaron Villarma, Vincent A Fischetti, Lars F Westblade, and Neil S Lipman PloS one 2018 (12) e0209231 |
| Draft Genome Sequence of French Guiana Leishmania ( Viannia ) guyanensis Strain 204-365, Assembled Using Long Reads. Dhwani Batra, Wuling Lin, Lori A Rowe, Mili Sheth, Yueli Zheng, Vladimir Loparev, and Marcos de Almeida Microbiology resource announcements 2018 Dec (23) |
| Analysis of Whole-Genome Sequences for the Prediction of Penicillin Resistance and ß-Lactamase Activity in Bacillus anthracis . A S Gargis, H P McLaughlin, A B Conley, C Lascols, P A Michel, J E Gee, C K Marston, C B Kolton, L M Rodriguez-R, A R Hoffmaster, L M Weigel, and D Sue mSystems (6) |
| Molecular epidemiology of noroviruses in children under 5 years of age with acute gastroenteritis in Yaoundé, Cameroon. Akongnwi E Mugyia, Valentine N Ndze, Jane-Francis T K Akoachere, Hannah Browne, Angeline Boula, Paul Koki Ndombo, Jennifer L Cannon, Jan Vinjé, and Lucy M Ndip Journal of medical virology 2018 Dec |
| Streptococcus mitis Expressing Pneumococcal Serotype 1 Capsule. Fernanda C Lessa, Jennifer Milucky, Nadine G Rouphael, Nancy M Bennett, H Keipp Talbot, Lee H Harrison, Monica M Farley, Jeremy Walston, Fabiana Pimenta, Robert E Gertz, Gowrisankar Rajam, Maria da Gloria Carvalho, Bernard Beall, and Cynthia G Whitney Scientific reports 2018 Dec (1) 17959 |
| Whole genome sequencing to characterize capsule locus and predict serogroup of invasive meningococcal isolates. Henju Marjuki, Nadav Topaz, Lorraine D Rodriguez-Rivera, Edward Ramos, Caelin C Potts, Alexander Chen, Adam C Retchless, Gregory H Doho, and Xin Wang Journal of clinical microbiology 2018 Dec |
| Sputum smear microscopy in the Xpert ® MTB/RIF era. A Van Deun, S Tahseen, D Affolabi, M A Hossain, M L Joloba, P K Angra, J C Ridderhof, B C de Jong, and H L Rieder The international journal of tuberculosis and lung disease : the official journal of the International Union against Tuberculosis and Lung Disease 2018 Dec |
| Zoonotic Source Attribution of Salmonella enterica Serotype Typhimurium Using Genomic Surveillance Data, United States. Shaokang Zhang, Shaoting Li, Weidong Gu, Henk den Bakker, Dave Boxrud, Angie Taylor, Chandler Roe, Elizabeth Driebe, David M Engelthaler, Marc Allard, Eric Brown, Patrick McDermott, Shaohua Zhao, Beau B Bruce, Eija Trees, Patricia I Fields, and Xiangyu Deng Emerging infectious diseases 2019 Jan 25(1) 82-91 |
| Clinical and Molecular Features of Feline Foamy Virus and Feline Leukemia Virus Co-Infection in Naturally-Infected Cats. Liliane T F Cavalcante, Cláudia P Muniz, Hongwei Jia, Anderson M Augusto, Fernando Troccoli, Sheila de O Medeiros, Carlos G A Dias, William M Switzer, Marcelo A Soares, and André F Santos Viruses 2018 Dec 10(12) |
| Maintenance and reappearance of extremely divergent intra-host HIV-1 variants. Joel O Wertheim, Alexandra M Oster, Ben Murrell, Neeraja Saduvala, Walid Heneine, William M Switzer, and Jeffrey A Johnson Virus evolution 2018 Jul (2) vey030 |
| The contribution of parent-to-offspring transmission of telomeres to the heritability of telomere length in humans. Dayana A Delgado, Chenan Zhang, Kevin Gleason, Kathryn Demanelis, Lin S Chen, Jianjun Gao, Shantanu Roy, Justin Shinkle, Mekala Sabarinathan, Maria Argos, Lin Tong, Alauddin Ahmed, Tariqul Islam, Muhammad Rakibuz-Zaman, Golam Sarwar, Hasan Shahriar, Mahfuzar Rahman, Muhammad Yunus, Jennifer A Doherty, Farzana Jasmine, Muhammad G Kibriya, Habibul Ahsan, and Brandon L Pierce Human genetics 2018 Dec |
| Characterization of the Genome Sequences of Enterovirus C109 from Two Respiratory Disease Cases in Florida, 2016. Terry Fei Fan Ng, Joseph A Yglesias, Tiffany A Stevenson-Yuen, Caitlin M Wolfe, Marshall R Cone, Lea A Heberlein-Larson, Kaija Maher, Shannon Rogers, Shur-Wern Wang Chern, Anna Montmayeur, Christina Castro, and W Allan Nix Microbiology resource announcements 2018 Jul (3) |
| Draft Genome Sequences of Nine Vibrio sp. Isolates from across the United States Closely Related to Vibrio cholerae. Mohammad Tarequl Islam, Kevin Liang, Monica S Im, Jonathan Winkjer, Shelby Busby, Cheryl L Tarr, and Yan Boucher Microbiology resource announcements 2018 Nov 7(21) |
| Complete Genome Sequence of Streptacidiphilus sp. Strain 15-057A, Obtained from Bronchial Lavage Fluid. Robert A Arthur, Christopher A Gulvik, Ben W Humrighouse, Brent A Lasker, Dhwani Batra, Lori A Rowe, José Mariano Igual, Imen Nouioui, Hans-Peter Klenk, and John R McQuiston Microbiology resource announcements 2018 Nov 7(19) |
| Draft Genome Sequences for a Diverse Set of Seven Haemophilus and Aggregatibacter Species. Megan Nichols, Nadav Topaz, Xiong Wang, Xin Wang, and Dave Boxrud Microbiology resource announcements 2018 Oct 7(16) |
| Complete Genome Sequences of Monongahela Hantavirus from Pennsylvania, USA. César G Albariño, Lisa Wiggleton Guerrero, Ayan K Chakrabarti, Pierre E Rollin, and Stuart T Nichol Microbiology resource announcements 2018 Sep (11) |
| A Population-Based Descriptive Atlas of Invasive Pneumococcal Strains Recovered Within the U.S. During 2015-2016. Bernard Beall, Sopio Chochua, Robert E Gertz, Yuan Li, Zhongya Li, Lesley McGee, Benjamin J Metcalf, Jessica Ricaldi, Theresa Tran, Hollis Walker, and Tamara Pilishvili Frontiers in microbiology 2018 92670 |
| Association of phthalates, parabens and phenols found in personal care products with pubertal timing in girls and boys. Kim G Harley, Kimberly P Berger, Katherine Kogut, Kimberly Parra, Robert H Lustig, Louise C Greenspan, Antonia M Calafat, Xiaoyun Ye, and Brenda Eskenazi Human reproduction (Oxford, England) 2018 Dec |
| Minimally Invasive Saliva Testing to Monitor Norovirus Infection in Community Settings. Nora Pisanic, Sarah-Blythe Ballard, Fabiola D Colquechagua, Ruthly François, Natalie Exum, Pablo Peñataro Yori, Kellogg J Schwab, Douglas A Granger, Barbara Detrick, Maribel Paredes Olortegui, Holger Mayta, Gerardo J Sánchez, Robert H Gilman, Christopher D Heaney, Jan Vinjé, and Margaret N Kosek The Journal of infectious diseases 2018 Dec |
| Communication About Hereditary Cancers on Social Media: A Content Analysis of Tweets About Hereditary Breast and Ovarian Cancer and Lynch Syndrome. Caitlin G Allen, Megan Roberts, Brittany Andersen, and Muin J Khoury Journal of cancer education : the official journal of the American Association for Cancer Education 2018 Dec |
| The phylogeography and incidence of multi-drug resistant typhoid fever in sub-Saharan Africa. Se Eun Park, Duy Thanh Pham, Christine Boinett, Vanessa K Wong, Gi Deok Pak, Ursula Panzner, Ligia Maria Cruz Espinoza, Vera von Kalckreuth, Justin Im, Heidi Schütt-Gerowitt, John A Crump, Robert F Breiman, Yaw Adu-Sarkodie, Ellis Owusu-Dabo, Raphaël Rakotozandrindrainy, Abdramane Bassiahi Soura, Abraham Aseffa, Nagla Gasmelseed, Karen H Keddy, Jürgen May, Amy Gassama Sow, Peter Aaby, Holly M Biggs, Julian T Hertz, Joel M Montgomery, Leonard Cosmas, Beatrice Olack, Barry Fields, Nimako Sarpong, Tsiriniaina Jean Luco Razafindrabe, Tiana Mirana Raminosoa, Leon Parfait Kabore, Emmanuel Sampo, Mekonnen Teferi, Biruk Yeshitela, Muna Ahmed El Tayeb, Arvinda Sooka, Christian G Meyer, Ralf Krumkamp, Denise Myriam Dekker, Anna Jaeger, Sven Poppert, Adama Tall, Aissatou Niang, Morten Bjerregaard-Andersen, Sandra Valborg Løfberg, Hye Jin Seo, Hyon Jin Jeon, Jessica Fung Deerin, Jinkyung Park, Frank Konings, Mohammad Ali, John D Clemens, Peter Hughes, Juliet Nsimire Sendagala, Tobias Vudriko, Robert Downing, Usman N Ikumapayi, Grant A Mackenzie, Stephen Obaro, Silvia Argimon, David M Aanensen, Andrew Page, Jacqueline A Keane, Sebastian Duchene, Zoe Dyson, Kathryn E Holt, Gordon Dougan, Florian Marks, and Stephen Baker Nature communications 2018 Nov (1) 5094 |
| The molecular mechanism of induction of unfolded protein response by Chlamydia. Zenas George, Yusuf Omosun, Anthony A Azenabor, Jason Goldstein, James Partin, Kahaliah Joseph, Debra Ellerson, Qing He, Francis Eko, Melissa A McDonald, Matthew Reed, Pavel Svoboda, Olga Stuchlik, Jan Pohl, Erika Lutter, Claudiu Bandea, Carolyn M Black, and Joseph U Igietseme Biochemical and biophysical research communications 2018 Nov |
| The Amblyomma maculatum Koch, 1844 (Acari: Ixodidae) group of ticks: phenotypic plasticity or incipient speciation? Paula Lado, Santiago Nava, Leonardo Mendoza-Uribe, Abraham G Caceres, Jesus Delgado-de la Mora, Jesus D Licona-Enriquez, David Delgado-de la Mora, Marcelo B Labruna, Lance A Durden, Michelle E J Allerdice, Christopher D Paddock, Matias P J Szabó, José M Venzal, Alberto A Guglielmone, and Lorenza Beati Parasites & vectors 2018 Nov (1) 610 |
| Diagnosis of Human Immunodeficiency Virus Infection. Bharat S Parekh, Chin-Yih Ou, Peter N Fonjungo, Mireille B Kalou, Erin Rottinghaus, Adrian Puren, Heather Alexander, Mackenzie Hurlston Cox, and John N Nkengasong Clinical microbiology reviews 2019 Jan (1) |
| Novel Wolbachia strains in Anopheles malaria vectors from Sub-Saharan Africa. Claire L Jeffries, Gena G Lawrence, George Golovko, Mojca Kristan, James Orsborne, Kirstin Spence, Eliot Hurn, Janvier Bandibabone, Luciano M Tantely, Fara N Raharimalala, Kalil Keita, Denka Camara, Yaya Barry, Francis Wat'senga, Emile Z Manzambi, Yaw A Afrane, Abdul R Mohammed, Tarekegn A Abeku, Shivanand Hedge, Kamil Khanipov, Maria Pimenova, Yuriy Fofanov, Sebastien Boyer, Seth R Irish, Grant L Hughes, and Thomas Walker Wellcome open research 2018 3113 |
| Mechanistic Basis for Decreased Antimicrobial Susceptibility in a Clinical Isolate of Neisseria gonorrhoeae Possessing a Mosaic-Like mtr Efflux Pump Locus. Corinne E Rouquette-Loughlin, Jennifer L Reimche, Jacqueline T Balthazar, Vijaya Dhulipala, Kim M Gernert, Ellen N Kersh, Cau D Pham, Kevin Pettus, A Jeanine Abrams, David L Trees, Sancta St Cyr, and William M Shafer mBio 2018 Nov (6) |
| Global emergence and population dynamics of divergent serotype 3 CC180 pneumococci. Taj Azarian, Patrick K Mitchell, Maria Georgieva, Claudette M Thompson, Amel Ghouila, Andrew J Pollard, Anne von Gottberg, Mignon du Plessis, Martin Antonio, Brenda A Kwambana-Adams, Stuart C Clarke, Dean Everett, Jennifer Cornick, Ewa Sadowy, Waleria Hryniewicz, Anna Skoczynska, Jennifer C Moïsi, Lesley McGee, Bernard Beall, Benjamin J Metcalf, Robert F Breiman, P L Ho, Raymond Reid, Katherine L O'Brien, Rebecca A Gladstone, Stephen D Bentley, and William P Hanage PLoS pathogens 2018 Nov 14(11) e1007438 |
| Current Social Media Conversations about Genetics and Genomics in Health: A Twitter-Based Analysis. Caitlin G Allen, Brittany Andersen, Muin J Khoury, and Megan C Roberts Public health genomics 2018 Nov 1-7 |
| Prevalence of Amyotrophic Lateral Sclerosis - United States, 2015. Paul Mehta, Wendy Kaye, Jaime Raymond, Reshma Punjani, Theodore Larson, Jessica Cohen, Oleg Muravov, and Kevin Horton MMWR. Morbidity and mortality weekly report 2018 Nov 67(46) 1285-1289 |
| Outbreak of Tattoo-Associated Nontuberculous Mycobacterial Skin Infections. Isabel Griffin, Ann Schmitz, Christine Oliver, Scott Pritchard, Guoyan Zhang, Edhelene Rico, Emily Davenport, Anthoni Llau, Emily Moore, Danielle Fernandez, Alvaro Mejia-Echeverry, Juan Suarez, Pedro Noya-Chaveco, Samir Elmir, Reynald Jean, James B Pettengill, Katherine A Hollinger, Kyson Chou, Donna Williams-Hill, Sherif Zaki, Atis Muehlenbachs, M Kelly Keating, Julu Bhatnagar, Marie-Claire Rowlinson, Calin Chiribau, and Lillian Rivera Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2018 Nov |
| A large HCV transmission network enabled a fast-growing HIV outbreak in rural Indiana, 2015. Sumathi Ramachandran, Hong Thai, Joseph C Forbi, Romeo Regi Galang, Zoya Dimitrova, Guo-Liang Xia, Yulin Lin, Lili T Punkova, Pamela R Pontones, Jessica Gentry, Sara J Blosser, Judith Lovchik, William M Switzer, Eyasu Teshale, Philip Peters, John Ward, Yury Khudyakov, and EBioMedicine 2018 Nov |
| Detection of central nervous system viral infections in adults in Manado, North Sulawesi, Indonesia. Arthur H P Mawuntu, Janno B B Bernadus, Rama Dhenni, Ageng Wiyatno, Riane Anggreani, Feliana, Frilasita A Yudhaputri, Ungke Anton Jaya, Chairin Nisa Ma'roef, Aghnianditya K Dewantari, Araniy Fadhilah, Jeremy P Ledermann, Ann M Powers, Dodi Safari, and Khin Saw Aye Myint PloS one 2018 13(11) e0207440 |
| Plasmodium falciparum Treated with Artemisinin-based Combined Therapy Exhibits Enhanced Mutation, Heightened Cortisol and TNF-a Induction. Abel Olusola Idowu, Sanjib Bhattacharyya, Steve Gradus, Wellington Oyibo, Zenas George, Carolyn Black, Joseph Igietseme, and Anthony Ajayi Azenabor International journal of medical sciences 2018 15(13) 1449-1457 |
| Increase in Acute Flaccid Myelitis - United States, 2018. Susannah L McKay, Adria D Lee, Adriana S Lopez, W Allan Nix, Kathleen L Dooling, Amelia A Keaton, Emily Spence-Davizon, Rachel Herlihy, Thomas A Clark, Sarah E Hopkins, Daniel M Pastula, James Sejvar, M Steven Oberste, Mark A Pallansch, Manisha Patel, and Janell A Routh MMWR. Morbidity and mortality weekly report 2018 Nov 67(45) 1273-1275 |
| Completeness of HIV nucleotide sequence ascertainment and its potential impact on understanding HIV transmission - Maryland, 2011-2013. Richard B Brooks, Katherine A Feldman, David Blythe, and Colin Flynn AIDS care 2018 Nov 1-8 |
| Prevalence of inherited blood disorders and associations with malaria and anemia in Malawian children. Patrick T McGann, Anne M Williams, Graham Ellis, Kathryn E McElhinney, Laurel Romano, Julia Woodall, Thad A Howard, Gerald Tegha, Robert Krysiak, R Murray Lark, E Louise Ander, Carine Mapango, Kenneth I Ataga, Satish Gopal, Nigel S Key, Russell E Ware, and Parminder S Suchdev Blood advances 2018 Nov (21) 3035-3044 |
| Concordance analysis between different methodologies used for identification of oral isolates of Candida species. Alejandra Zuluaga, Karen Arango-Bustamante, Diego H Caceres, Zilpa A Sánchez-Quitian, Verónica Velásquez, Beatriz L Gómez, Claudia M Parra-Giraldo, Natalia Maldonado, Luz E Cano, Catalina de Bedout, and Raúl E Rivera Colombia medica (Cali, Colombia) 2018 Sep 49(3) 193-200 |
| imGLAD: accurate detection and quantification of target organisms in metagenomes. Juan C Castro, Luis M Rodriguez-R, William T Harvey, Michael R Weigand, Janet K Hatt, Michelle Q Carter, and Konstantinos T Konstantinidis PeerJ 2018 6e5882 |
| Estimating effects of HIV sequencing data completeness on transmission network patterns and detection of growing HIV transmission clusters. Sharoda Dasgupta, Anne Marie France, Mary-Grace Brandt, Jennifer Reuer, Tianchi Zhang, Nivedha Panneer, Angela L Hernandez, and Alexandra M Oster AIDS research and human retroviruses 2018 Nov |
| Transcriptomics Reveal Antiviral Gene Induction in the Egyptian Rousette Bat Is Antagonized In Vitro by Marburg Virus Infection. Catherine E Arnold, Jonathan C Guito, Louis A Altamura, Sean P Lovett, Elyse R Nagle, Gustavo F Palacios, Mariano Sanchez-Lockhart, and Jonathan S Towner Viruses 2018 Nov 10(11) |
| PacBio Genome Sequences of Escherichia coli Serotype O157:H7, Diffusely Adherent E. coli , and Salmonella enterica Strains, All Carrying Plasmids with an mcr-1 Resistance Gene. Rebecca L Lindsey, Dhwani Batra, Peyton Smith, Pooja N Patel, Kaitlin A Tagg, Lisley Garcia-Toledo, Vladimir N Loparev, Phalasy Juieng, Mili Sheth, Yoo Jin Joung, and Lori A Rowe Microbiology resource announcements 2018 (14) |
| Notes from the Field: Intestinal Colonization and Possible Iatrogenic Botulism in Mouse Bioassay-Negative Serum Specimens - Los Angeles County, California, November 2017. Umme-Aiman Halai, Dawn Terashita, Moon Kim, Nicole Green, Suzanne R Kalb, Kevin Chatham-Stephens, and Sharon Balter MMWR. Morbidity and mortality weekly report 2018 Nov (43) 1221-1222 |
| Evaluation of the impact of a sequencing assay for detection of drug resistance on the clinical management of tuberculosis. Phil Lowenthal, Shou-Yean Grace Lin, Ed Desmond, Neha Shah, Jennifer Flood, and Pennan M Barry Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2018 Nov |
| Gastrointestinal microbiota disruption and risk of colonization with carbapenem-resistant Pseudomonas aeruginosa in ICU patients. Melinda M Pettigrew, Janneane F Gent, Yong Kong, Alison Laufer Halpin, Lisa Pineles, Anthony D Harris, and J Kristie Johnson Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2018 Nov |
| Multiplex TaqMan qPCR assay for specific identification of encapsulated Trichinella species prevalent in North America. Marcos de Almeida, Henry Bishop, Fernanda S Nascimento, Blaine Mathison, Richard S Bradbury, and Alexandre da Silva Memorias do Instituto Oswaldo Cruz 2018 Oct (11) e180305 |
| A Logic Model of Neuronal-Glial Interaction Suggests Altered Homeostatic Regulation in the Perpetuation of Neuroinflammation. Travis J A Craddock, Lindsay T Michalovicz, Kimberly A Kelly, Mark A Rice, Diane B Miller, Nancy G Klimas, Mariana Morris, James P O'Callaghan, and Gordon Broderick Frontiers in cellular neuroscience 2018 12336 |
| New Insights into the Evolutionary and Genomic Landscape of Molluscum Contagiosum Virus (MCV) based on Nine MCV1 and Six MCV2 Complete Genome Sequences. Tomaž M Zorec, Denis Kutnjak, Lea Hošnjak, Blanka Kušar, Katarina Trcko, Boštjan J Kocjan, Yu Li, Miljenko Križmaric, Jovan Miljkovic, Maja Ravnikar, and Mario Poljak Viruses 2018 Oct (11) |
| Molecular detection and genotyping of pathogenic protozoan parasites in raw and treated water samples from southwest Colombia. Claudia Sánchez, Myriam Consuelo López, Luis Alejandro Galeano, Yvonne Qvarnstrom, Katelyn Houghton, and Juan David Ramírez Parasites & vectors 2018 Oct (1) 563 |
| Increased discrimination of Treponema pallidum strains by subtyping with a four-component system incorporating a mononucleotide tandem repeat in rspA. Allan Pillay, Min-Kuang Lee, Tom Slezak, Samantha S Katz, Yongcheng Sun, Kai-Hua Chi, Muhammad Morshed, Susan Philip, Ronald C Ballard, and Cheng Y Chen Sexually transmitted diseases 2018 Oct |
| Antimicrobial Resistance in Neisseria gonorrhoeae: Proceedings of the STAR Sexually Transmitted Infection-Clinical Trial Group Programmatic Meeting. Anthony D Cristillo, Claire C Bristow, Elizabeth Torrone, Jo-Anne Dillon, Robert D Kirkcaldy, Huan Dong, Yonatan H Grad, Robert A Nicholas, Peter A Rice, Kenneth Lawrence, David Oldach, William Maurice Shafer, Pei Zhou, Teodora E Wi, Sheldon R Morris, and Jeffrey D Klausner Sexually transmitted diseases 2018 Oct |
| Whole genome sequencing for investigations of meningococcal outbreaks in the United States: a retrospective analysis. Melissa J Whaley, Sandeep J Joseph, Adam C Retchless, Cecilia B Kretz, Amy Blain, Fang Hu, How-Yi Chang, Sarah A Mbaeyi, Jessica R MacNeil, Timothy D Read, and Xin Wang Scientific reports 2018 Oct (1) 15803 |
| Translocation of a Stray Cat Infected with Rabies from North Carolina to a Terrestrial Rabies-Free County in Ohio, 2017. Amber J Singh, Richard B Chipman, Sietske de Fijter, Richard Gary, Marilyn G Haskell, Jordona Kirby, Li Yu, Rene E Condori, Lillian Orciari, and Ryan Wallace MMWR. Morbidity and mortality weekly report 2018 Oct (42) 1174-1177 |
| Epidemiologic and Genotypic distribution of Noroviruses among children with Acute Diarrhea and Healthy Controls in a Low-income Rural Setting. Mohammad Enayet Hossain, Rajibur Rahman, Sk Imran Ali, Md Muzahidul Islam, Mohammed Ziaur Rahman, Shahnawaz Ahmed, Abu Syed Golam Faruque, Leslie Barclay, Jan Vinjé, and Mustafizur Rahman Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2018 Oct |
| Automated quality control for a molecular surveillance system. Seth Sims, Atkinson G Longmire, David S Campo, Sumathi Ramachandran, Magdalena Medrzycki, Lilia Ganova-Raeva, Yulin Lin, Amanda Sue, Hong Thai, Alexander Zelikovsky, and Yury Khudyakov BMC bioinformatics 2018 Oct (Suppl 11) 358 |
| PoSE: visualization of patterns of sequence evolution using PAML and MATLAB. Kun Zhao, Elizabeth Henderson, Kelley Bullard, M Steven Oberste, Cara C Burns, and Jaume Jorba BMC bioinformatics 2018 Oct (Suppl 11) 364 |
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