CDC-Authored Genomics and Precision Health Publications Database
Last data update: Dec 04, 2023. (Total: 4781 publications since 2011)
| Query Trace: all records[original query] |
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| Prevalence and characterization of gastroenteritis viruses among hospitalized children during a pilot rotavirus vaccine introduction in Vietnam
Mai CTN , Ly LTK , Doan YH , Oka T , Mai LTP , Quyet NT , Mai TNP , Thiem VD , Anh LT , Van Sanh L , Hien ND , Anh DD , Parashar UD , Tate JE , Van Trang N . Viruses 2023 15 (11) |
| Evaluation of the US COVID-19 Scenario Modeling Hub for informing pandemic response under uncertainty
Howerton E , Contamin L , Mullany LC , Qin M , Reich NG , Bents S , Borchering RK , Jung SM , Loo SL , Smith CP , Levander J , Kerr J , Espino J , van Panhuis WG , Hochheiser H , Galanti M , Yamana T , Pei S , Shaman J , Rainwater-Lovett K , Kinsey M , Tallaksen K , Wilson S , Shin L , Lemaitre JC , Kaminsky J , Hulse JD , Lee EC , McKee CD , Hill A , Karlen D , Chinazzi M , Davis JT , Mu K , Xiong X , Pastore YPiontti A , Vespignani A , Rosenstrom ET , Ivy JS , Mayorga ME , Swann JL , España G , Cavany S , Moore S , Perkins A , Hladish T , Pillai A , Ben Toh K , Longini I Jr , Chen S , Paul R , Janies D , Thill JC , Bouchnita A , Bi K , Lachmann M , Fox SJ , Meyers LA , Srivastava A , Porebski P , Venkatramanan S , Adiga A , Lewis B , Klahn B , Outten J , Hurt B , Chen J , Mortveit H , Wilson A , Marathe M , Hoops S , Bhattacharya P , Machi D , Cadwell BL , Healy JM , Slayton RB , Johansson MA , Biggerstaff M , Truelove S , Runge MC , Shea K , Viboud C , Lessler J . Nat Commun 2023 14 (1) 7260 |
| Genomic and phenotypic characterization of shiga toxin-producing Escherichia albertii strains isolated from wild birds in a major agricultural region in California
Carter MQ , Quiñones B , He X , Pham A , Carychao D , Cooley MB , Lo CC , Chain PSG , Lindsey RL , Bono JL . Microorganisms 2023 11 (11) |
| Effectiveness of self-collected, ambient temperature-preserved nasal swabs compared to samples collected by trained staff for genotyping of respiratory viruses by shotgun RNA sequencing: Comparative study
Soto R , Paul L , Porucznik CA , Xie H , Stinnett RC , Briggs B , Biggerstaff M , Stanford J , Schlaberg R . JMIR Form Res 2023 7 e32848 |
| HantaNet: A new microbetrace application for hantavirus classification, genomic surveillance, epidemiology and outbreak investigations
Cintron R , Whitmer SLM , Moscoso E , Campbell EM , Kelly R , Talundzic E , Mobley M , Chiu KW , Shedroff E , Shankar A , Montgomery JM , Klena JD , Switzer WM . Viruses 2023 15 (11) |
| Nationwide hepatitis C serosurvey and progress towards HCV elimination in the country of Georgia, 2021
Gamkrelidze A , Shadaker S , Tsereteli M , Alkhazashvili M , Chitadze N , Tskhomelidze I , Gvinjilia L , Khetsuriani N , Handanagic S , Averhoff F , Cloherty G , Chakhunashvili G , Drobeniuc J , Imnadze P , Zakhashvili K , Armstrong PA . J Infect Dis 2023 228 (6) 684-693 |
| Evidence review and recommendations for the implementation of genomics for antimicrobial resistance surveillance: reports from an international expert group
Baker KS , Jauneikaite E , Nunn JG , Midega JT , Atun R , Holt KE , Walia K , Howden BP , Tate H , Okeke IN , Carattoli A , Hsu LY , Hopkins KL , Muloi DM , Wheeler NE , Aanensen DM , Mason LCE , Rodgus J , Hendriksen RS , Essack SY , Egyir B , Halpin AL , MacCannell DR , Campos J , Srikantiah P , Feasey NA , Peacock SJ . Lancet Microbe 2023 |
| Genomics for antimicrobial resistance surveillance to support infection prevention and control in health-care facilities
Jauneikaite E , Baker KS , Nunn JG , Midega JT , Hsu LY , Singh SR , Halpin AL , Hopkins KL , Price JR , Srikantiah P , Egyir B , Okeke IN , Holt KE , Peacock SJ , Feasey NA . Lancet Microbe 2023 |
| Comparison of carbapenem-susceptible and carbapenem-resistant Enterobacterales at nine sites in the USA, 2013-2016: a resource for antimicrobial resistance investigators
Lutgring JD , Kent AG , Bowers JR , Jasso-Selles DE , Albrecht V , Stevens VA , Pfeiffer A , Barnes R , Engelthaler DM , Johnson JK , Gargis AS , Rasheed JK , Limbago BM , Elkins CA , Karlsson M , Halpin AL . Microb Genom 2023 9 (11) |
| A cluster of ocular syphilis cases with a common sex partner - Southwest Michigan, 2022
Nettleton WD , Kent JB , Lightheart K , Diesel JC . MMWR Morb Mortal Wkly Rep 2023 72 (47) 1281-1287 |
| Genomic analysis of azithromycin-resistant Salmonella from food animals at slaughter and processing, and retail meats, 2011-2021, United States
Ge B , Mukherjee S , Li C , Harrison LB , Hsu CH , Tran TT , Whichard JM , Dessai U , Singh R , Gilbert JM , Strain EA , McDermott PF , Zhao S . Microbiol Spectr 2023 e0348523 |
| Antibody-mediated suppression regulates the humoral immune response to influenza vaccination in humans
Lu X , Liu F , Tzeng WP , York IA , Tumpey T , Levine MZ . J Infect Dis 2023 |
| The menstrual cycle regulates migratory CD4 t cell surveillance in the female reproductive tract via CCR5 signaling
Elliott Williams M , Hardnett FP , Sheth AN , Wein AN , Li ZT , Radzio-Basu J , Dinh C , Haddad LB , Collins EMB , Ofotokun I , Antia R , Scharer CD , Garcia-Lerma JG , Kohlmeier JE , Swaims-Kohlmeier A . Mucosal Immunol 2023 |
| Association between a first-degree family history and self-reported personal history of obesity, diabetes, and heart and blood conditions: Results from the All of Us Research Program
Rasooly D , Moonesinghe R , Littrell K , Hull L , Khoury MJ . J Am Heart Assoc 2023 e030779 
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| The relationship between the intestinal microbiome and body mass index in children with cystic fibrosis
Bernard R , Shilts MH , Strickland BA , Boone HH , Payne DC , Brown RF , Edwards K , Das SR , Nicholson MR . J Cyst Fibros 2023 |
| Effectiveness of the original monovalent coronavirus disease 2019 vaccines in preventing emergency department or urgent care encounters and hospitalizations among adults with disabilities: VISION Network, June 2021-September 2022
Patel P , Schrader KE , Rice CE , Rowley E , Cree RA , DeSilva MB , Embi PJ , Gaglani M , Grannis SJ , Ong TC , Stenehjem E , Naleway AL , Ball S , Natarajan K , Klein NP , Adams K , Kharbanda A , Ray C , Link-Gelles R , Tenforde MW . Open Forum Infect Dis 2023 10 (11) ofad474 |
| Symptoms, viral loads, and rebound among COVID-19 outpatients treated with nirmatrelvir/ritonavir compared to propensity score matched untreated individuals
Smith-Jeffcoat SE , Biddle JE , Talbot HK , Morrisey KG , Stockwell MS , Maldonado Y , McLean HQ , Ellingson KD , Bowman NM , Asturias E , Mellis AM , Johnson S , Kirking HL , Rolfes MAR , Olivo V , Merrill L , Battan-Wraith S , Sano E , McLaren SH , Vargas CY , Goodman S , Sarnquist CC , Govindaranjan P , Petrie JG , Belongia EA , Ledezma K , Pryor K , Lutrick K , Bullock A , Yang A , Haehnel Q , Rao S , Zhu Y , Schmitz J , Hart K , Grijalva CG , Salvatore PP . Clin Infect Dis 2023 |
| The Human Phenotype Ontology in 2024: phenotypes around the world
Gargano MA , Matentzoglu N , Coleman B , Addo-Lartey EB , Anagnostopoulos AV , Anderton J , Avillach P , Bagley AM , Bakštein E , Balhoff JP , Baynam G , Bello SM , Berk M , Bertram H , Bishop S , Blau H , Bodenstein DF , Botas P , Boztug K , Čady J , Callahan TJ , Cameron R , Carbon SJ , Castellanos F , Caufield JH , Chan LE , Chute CG , Cruz-Rojo J , Dahan-Oliel N , Davids JR , de Dieuleveult M , de Souza V , de Vries BBA , de Vries E , DePaulo JR , Derfalvi B , Dhombres F , Diaz-Byrd C , Dingemans AJM , Donadille B , Duyzend M , Elfeky R , Essaid S , Fabrizzi C , Fico G , Firth HV , Freudenberg-Hua Y , Fullerton JM , Gabriel DL , Gilmour K , Giordano J , Goes FS , Moses RG , Green I , Griese M , Groza T , Gu W , Guthrie J , Gyori B , Hamosh A , Hanauer M , Hanušová K , He YO , Hegde H , Helbig I , Holasová K , Hoyt CT , Huang S , Hurwitz E , Jacobsen JOB , Jiang X , Joseph L , Keramatian K , King B , Knoflach K , Koolen DA , Kraus ML , Kroll C , Kusters M , Ladewig MS , Lagorce D , Lai MC , Lapunzina P , Laraway B , Lewis-Smith D , Li X , Lucano C , Majd M , Marazita ML , Martinez-Glez V , McHenry TH , McInnis MG , McMurry JA , Mihulová M , Millett CE , Mitchell PB , Moslerová V , Narutomi K , Nematollahi S , Nevado J , Nierenberg AA , Čajbiková NN , Nurnberger JI Jr , Ogishima S , Olson D , Ortiz A , Pachajoa H , Perez de Nanclares G , Peters A , Putman T , Rapp CK , Rath A , Reese J , Rekerle L , Roberts AM , Roy S , Sanders SJ , Schuetz C , Schulte EC , Schulze TG , Schwarz M , Scott K , Seelow D , Seitz B , Shen Y , Similuk MN , Simon ES , Singh B , Smedley D , Smith CL , Smolinsky JT , Sperry S , Stafford E , Stefancsik R , Steinhaus R , Strawbridge R , Sundaramurthi JC , Talapova P , Tenorio Castano JA , Tesner P , Thomas RH , Thurm A , Turnovec M , van Gijn ME , Vasilevsky NA , Vlčková M , Walden A , Wang K , Wapner R , Ware JS , Wiafe AA , Wiafe SA , Wiggins LD , Williams AE , Wu C , Wyrwoll MJ , Xiong H , Yalin N , Yamamoto Y , Yatham LN , Yocum AK , Young AH , Yüksel Z , Zandi PP , Zankl A , Zarante I , Zvolský M , Toro S , Carmody LC , Harris NL , Munoz-Torres MC , Danis D , Mungall CJ , Köhler S , Haendel MA , Robinson PN . Nucleic Acids Res 2023 |
| Standard-dose versus MF59-adjuvanted, high-dose or recombinant-hemagglutinin influenza vaccine immunogenicity in older adults: comparison of A(H3N2) antibody response by prior season's vaccine status
Zhong S , Ng TWY , Skowronski DM , Iuliano AD , Leung NHL , Perera Rapm , Ho F , Fang VJ , Tam YH , Ip DKM , Havers FG , Fry AM , Aziz-Baumgartner E , Barr IG , Peiris M , Thompson MG , Cowling BJ . J Infect Dis 2023 |
| Previous infection and effectiveness of COVID-19 vaccination in middle- and high-school students
Almendares OM , Ruffin JD , Collingwood AH , Nolen LD , Lanier WA , Dash SR , Ciesla AA , Wiegand R , Tate JE , Kirking HL . Pediatrics 2023 |
| Author Correction: Multiplexed CRISPR-based microfluidic platform for clinical testing of respiratory viruses and identification of SARS-CoV-2 variants
Welch NL , Zhu M , Hua C , Weller J , Mirhashemi ME , Nguyen TG , Mantena S , Bauer MR , Shaw BM , Ackerman CM , Thakku SG , Tse MW , Kehe J , Uwera MM , Eversley JS , Bielwaski DA , McGrath G , Braidt J , Johnson J , Cerrato F , Moreno GK , Krasilnikova LA , Petros BA , Gionet GL , King E , Huard RC , Jalbert SK , Cleary ML , Fitzgerald NA , Gabriel SB , Gallagher GR , Smole SC , Madoff LC , Brown CM , Keller MW , Wilson MM , Kirby MK , Barnes JR , Park DJ , Siddle KJ , Happi CT , Hung DT , Springer M , MacInnis BL , Lemieux JE , Rosenberg E , Branda JA , Blainey PC , Sabeti PC , Myhrvold C . Nat Med 2023 |
| The inflammatory response to birth requires MyD88 and is driven by both mother and offspring
Gray JM , Castillo-Ruiz A , Major KM , Shipley M , Gangappa S , Forger NG . Brain Behav Immun 2023 |
| CDC recommendations for hepatitis C testing among perinatally exposed infants and children - United States, 2023
Panagiotakopoulos L , Sandul AL , Conners EE , Foster MA , Nelson NP , Wester C . MMWR Recomm Rep 2023 72 (4) 1-21 |
| Malaria surveillance reveals parasite relatedness, signatures of selection, and correlates of transmission across Senegal
Schaffner SF , Badiane A , Khorgade A , Ndiop M , Gomis J , Wong W , Ndiaye YD , Diedhiou Y , Thwing J , Seck MC , Early A , Sy M , Deme A , Diallo MA , Sy N , Sene A , Ndiaye T , Sow D , Dieye B , Ndiaye IM , Gaye A , Ndiaye A , Battle KE , Proctor JL , Bever C , Fall FB , Diallo I , Gaye S , Sene D , Hartl DL , Wirth DF , MacInnis B , Ndiaye D , Volkman SK . Nat Commun 2023 14 (1) 7268 |
| Pre-Delta, Delta, and Omicron periods of the coronavirus disease 2019 (COVID-19) pandemic and health outcomes during delivery hospitalization
Carlson J , Simeone RM , Ellington S , Galang R , DeSisto CL , Fleming-Dutra K , Riley L , Meaney-Delman D , Tong VT . Obstet Gynecol 2023 |
| Prevalence of undiagnosed monkeypox virus infections during global mpox outbreak, United States, June-September 2022
Minhaj FS , Singh V , Cohen SE , Townsend M , Scott H , Szumowski J , Hare CB , Upadhyay P , Reddy J , Alexander B , Baird N , Navarra T , Priyamvada L , Wynn N , Carson WC , Odafe S , Guagliardo SAJ , Sims E , Rao AK , Satheshkumar PS , Weidle PJ , Hutson CL . Emerg Infect Dis 2023 29 (11) 2307-2314 |
| Duration of enterovirus d68 RNA shedding in the upper respiratory tract and transmission among household contacts, Colorado, USA
Nguyen-Tran H , Thompson C , Butler M , Miller KR , Pyle L , Jung S , Rogers S , Ng TFF , Routh J , Dominguez SR , Messacar K . Emerg Infect Dis 2023 29 (11) 2315-2324 |
| Strengthening influenza surveillance capacity in the Eastern Mediterranean Region: Nearly two decades of direct support from the United States Centers for Disease Control and Prevention
Zureick K , McCarron M , Dawson P , Davis JK , Barnes J , Wentworth D , Azziz-Baumgartner E . Influenza Other Respir Viruses 2023 17 (11) e13220 |
| Optimal reference genes for RNA tissue analysis in small animal models of hemorrhagic fever viruses
Davies KA , Welch SR , Sorvillo TE , Coleman-McCray JD , Martin ML , Brignone JM , Montgomery JM , Spiropoulou CF , Spengler JR . Sci Rep 2023 13 (1) 19384 |
| Simultaneous targeted amplicon deep sequencing and library preparation for a time and cost-effective universal parasite diagnostic sequencing approach
Gondard M , Lane M , Barratt J , Talundzic E , Qvarnstrom Y . Parasitol Res 2023 |
- Page last reviewed:Oct 1, 2023
- Page last updated:Dec 04, 2023
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