CDC-Authored Genomics and Precision Health Publications Database
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Last data update: Aug 15, 2019. (Total: 2578 publications since 2011)
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| Antibodies to Enteroviruses in Cerebrospinal Fluid of Patients with Acute Flaccid Myelitis. Nischay Mishra, Terry Fei Fan Ng, Rachel L Marine, Komal Jain, James Ng, Riddhi Thakkar, Adrian Caciula, Adam Price, Joel A Garcia, Jane C Burns, Kiran T Thakur, Kimbell L Hetzler, Janell A Routh, Jennifer L Konopka-Anstadt, W Allan Nix, Rafal Tokarz, Thomas Briese, M Steven Oberste, and W Ian Lipkin mBio 2019 Aug (4) |
| Strengthening laboratory capacity for detection of respiratory viral pathogens through the Global Health Security Agenda (GHSA) framework. Brett Whitaker, Karen A Alroy, Erica Guthrie, Sarah Schildecker, Susan Hiers, Jill Woodard, and S Arunmozhi Balajee African journal of laboratory medicine 2019 (1) 861 |
| Incomplete influenza A virus genomes occur frequently but are readily complemented during localized viral spread. Nathan T Jacobs, Nina O Onuoha, Alice Antia, John Steel, Rustom Antia, and Anice C Lowen Nature communications 2019 Aug 10(1) 3526 |
| Estimating prevalence of type I and type II diabetes using incidence rates: the SEARCH for diabetes in youth study. Thaddäus Tönnies, Giuseppina Imperatore, Annika Hoyer, Sharon H Saydah, Ralph B D'Agostino, Jasmin Divers, Scott Isom, Dana Dabelea, Jean M Lawrence, Elizabeth J Mayer-Davis, Catherine Pihoker, Lawrence Dolan, and Ralph Brinks Annals of epidemiology 2019 Jul |
| Commensal Neisseria Kill Neisseria gonorrhoeae through a DNA-Dependent Mechanism. Won Jong Kim, Dustin Higashi, Maira Goytia, Maria A Rendón, Michelle Pilligua-Lucas, Matthew Bronnimann, Jeanine A McLean, Joseph Duncan, David Trees, Ann E Jerse, and Magdalene So Cell host & microbe 2019 Jul |
| Molecular typing of clinical and environmental isolates of Cryptococcus gattii species complex from Southern California, United States. Steven Hurst, Colleen Lysen, Gail Cooksey, Duc J Vugia, Anastasia P Litvintseva, and Shawn R Lockhart Mycoses 2019 Aug |
| Comparison of respiratory pathogen yields from Nasopharyngeal/Oropharyngeal swabs and sputum specimens collected from hospitalized adults in rural Western Kenya. Bryan O Nyawanda, Henry N Njuguna, Clayton O Onyango, Caroline Makokha, Shirley Lidechi, Barry Fields, Jonas M Winchell, Jim S Katieno, Jeremiah Nyaundi, Fredrick Ade, Gideon O Emukule, Joshua A Mott, Nancy Otieno, Marc-Alain Widdowson, and Sandra S Chaves Scientific reports 2019 Aug (1) 11237 |
| Multicenter Outbreak of Gram-Negative Bloodstream Infections in Hemodialysis Patients. Shannon A Novosad, Jason Lake, Duc Nguyen, Elizabeth Soda, Heather Moulton-Meissner, Mai T Pho, Nicole Gualandi, Lurit Bepo, Richard A Stanton, Jonathan B Daniels, George Turabelidze, Kristen Van Allen, Matthew Arduino, Alison Laufer Halpin, Jennifer Layden, and Priti R Patel American journal of kidney diseases : the official journal of the National Kidney Foundation 2019 Jul |
| Genome of Alaskapox Virus, A Novel Orthopoxvirus Isolated from Alaska. Crystal M Gigante, Jinxin Gao, Shiyuyun Tang, Andrea M McCollum, Kimberly Wilkins, Mary G Reynolds, Whitni Davidson, Joseph McLaughlin, Victoria A Olson, and Yu Li Viruses 2019 Aug (8) |
| Notes from the Field: Clinical Klebsiella pneumoniae Isolate with Three Carbapenem Resistance Genes Associated with Urology Procedures - King County, Washington, 2018. Kirsten Vannice, Eileen Benoliel, Kelly Kauber, Claire Brostrom-Smith, Patricia Montgomery, Meagan Kay, Maroya Walters, Michael Tran, Marisa D'Angeli, and Jeff Duchin MMWR. Morbidity and mortality weekly report 2019 Aug 68(30) 667-668 |
| Perspective: The Clinical Use of Polygenic Risk Scores: Race, Ethnicity, and Health Disparities. Megan C Roberts, Muin J Khoury, and George A Mensah Ethnicity & disease 2019 29(3) 513-516 |
| The haematological consequences of Plasmodium vivax malaria after chloroquine treatment with and without primaquine: a WorldWide Antimalarial Resistance Network systematic review and individual patient data meta-analysis. Robert J Commons, Julie A Simpson, Kamala Thriemer, Cindy S Chu, Nicholas M Douglas, Tesfay Abreha, Sisay G Alemu, Arletta Añez, Nicholas M Anstey, Abraham Aseffa, Ashenafi Assefa, Ghulam R Awab, J Kevin Baird, Bridget E Barber, Isabelle Borghini-Fuhrer, Umberto D'Alessandro, Prabin Dahal, André Daher, Peter J de Vries, Annette Erhart, Margarete S M Gomes, Matthew J Grigg, Jimee Hwang, Piet A Kager, Tsige Ketema, Wasif A Khan, Marcus V G Lacerda, Toby Leslie, Benedikt Ley, Kartini Lidia, Wuelton M Monteiro, Dhelio B Pereira, Giao T Phan, Aung P Phyo, Mark Rowland, Kavitha Saravu, Carol H Sibley, André M Siqueira, Kasia Stepniewska, Walter R J Taylor, Guy Thwaites, Binh Q Tran, Tran T Hien, José Luiz F Vieira, Sonam Wangchuk, James Watson, Timothy William, Charles J Woodrow, Francois Nosten, Philippe J Guerin, Nicholas J White, and Ric N Price BMC medicine 2019 Aug 17(1) 151 |
| Heterogeneous susceptibility to rotavirus infection and gastroenteritis in two birth cohort studies: Parameter estimation and epidemiological implications. Joseph A Lewnard, Benjamin A Lopman, Umesh D Parashar, Aisleen Bennett, Naor Bar-Zeev, Nigel A Cunliffe, Prasanna Samuel, M Lourdes Guerrero, Guillermo Ruiz-Palacios, Gagandeep Kang, and Virginia E Pitzer PLoS computational biology 2019 Jul 15(7) e1007014 |
| Draft Genome Sequences of Antimicrobial-Resistant Shigella Clinical Isolates from Pakistan. Sara Lomonaco, Christine Lascols, Matthew A Crawford, Kevin Anderson, David R Hodge, Debra J Fisher, Segaran P Pillai, Stephen A Morse, Erum Khan, Molly A Hughes, Marc W Allard, and Shashi K Sharma Microbiology resource announcements 2019 Jul (30) |
| Messenger RNA levels of the Polo-like kinase gene (PLK) correlate with cytokinesis in the Trypanosoma rangeli cell cycle. Elisa Beatriz Prestes, Patrícia Hermes Stoco, Milene Höehr de Moraes, Hércules Moura, and Edmundo Carlos Grisard Experimental parasitology 2019 Jul 107727 |
| Notes from the Field: Targeted Biomonitoring for GenX and Other Per- and Polyfluoroalkyl Substances Following Detection of Drinking Water Contamination - North Carolina, 2018. Jamie R Pritchett, Jessica L Rinsky, Beth Dittman, Ariel Christensen, Rick Langley, Zack Moore, Aaron T Fleischauer, Kate Koehler, Antonia M Calafat, Rachel Rogers, Laconial Esters, Rodney Jenkins, Faye Collins, Debra Conner, and Patrick Breysse MMWR. Morbidity and mortality weekly report 2019 Jul 68(29) 647-648 |
| Social mixing and clinical features linked with transmission in a network of extensively drug-resistant (XDR) tuberculosis cases in KwaZulu-Natal, South Africa. Kristin N Nelson, Samuel M Jenness, Barun Mathema, Benjamin A Lopman, Sara C Auld, N Sarita Shah, James C M Brust, Nazir Ismail, Shaheed Vally Omar, Tyler S Brown, Salim Allana, Angie Campbell, Pravi Moodley, Koleka Mlisana, and Neel R Gandhi Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2019 Jul |
| Stable Occupancy of the Crimean-Congo Hemorrhagic Fever Virus-Encoded Deubiquitinase Blocks Viral Infection. Florine E M Scholte, Brian L Hua, Jessica R Spengler, John V Dzimianski, JoAnn D Coleman-McCray, Stephen R Welch, Laura K McMullan, Stuart T Nichol, Scott D Pegan, Christina F Spiropoulou, and Éric Bergeron mBio 2019 Jul 10(4) |
| Route of Vaccine Administration Influences the Impact of Fms-Like Tyrosine Kinase 3 Ligand (Flt3L) on Chlamydial-Specific Protective Immune Responses. Roshan Pais, Yusuf Omosun, Joseph U Igietseme, Kohtaro Fujihashi, and Francis O Eko Frontiers in immunology 2019 101577 |
| Association of occupational stress with waking, diurnal, and bedtime cortisol response in police officers. Penelope Allison, Anna Mnatsakanova, Desta B Fekedulegn, John M Violanti, Luenda E Charles, Tara A Hartley, Michael E Andrew, and Diane B Miller American journal of human biology : the official journal of the Human Biology Council 2019 Jul e23296 |
| Potential occupational and respiratory hazards in a Minnesota cannabis cultivation and processing facility. James R Couch, George R Grimes, Douglas M Wiegand, Brett J Green, Eric K Glassford, Leonard M Zwack, Angela R Lemons, Stephen R Jackson, and Donald H Beezhold American journal of industrial medicine 2019 Jul |
| Origins and organization of the NHLBI State of the Science Workshop: Generating a national blueprint for future research on factor VIII inhibitors. Denise E Sabatino, Steven W Pipe, Diane J Nugent, J Michael Soucie, W Craig Hooper, W Keith Hoots, and Donna M DiMichele Haemophilia : the official journal of the World Federation of Hemophilia 2019 Jul 25(4) 575-580 |
| Exome sequencing of family trios from the National Birth Defects Prevention Study: Tapping into a rich resource of genetic and environmental data. Mary M Jenkins, Lynn M Almli, Faith Pangilinan, Jessica X Chong, Elizabeth E Blue, Stuart K Shapira, Janson White, Daniel McGoldrick, Joshua D Smith, James C Mullikin, Christopher J Bean, Wendy N Nembhard, Xiang-Yang Lou, Gary M Shaw, Paul A Romitti, Kim Keppler-Noreuil, Mahsa M Yazdy, Denise M Kay, Tonia C Carter, Andrew F Olshan, Kristin J Moore, Nanette Nascone-Yoder, Richard H Finnell, Philip J Lupo, Marcia L Feldkamp, , Deborah A Nickerson, Michael J Bamshad, Lawrence C Brody, Jennita Reefhuis, Birth defects research 2019 Jul |
| Identification of key hemagglutinin residues responsible for cleavage, acid stability, and virulence of fifth-wave highly pathogenic avian influenza A(H7N9) viruses. Xiangjie Sun, Jessica A Belser, Hua Yang, Joanna A Pulit-Penaloza, Claudia Pappas, Nicole Brock, Hui Zeng, Hannah M Creager, James Stevens, and Taronna R Maines Virology 2019 Jul 535232-240 |
| Whole Genome Sequencing: Bridging One-Health Surveillance of Foodborne Diseases. Peter Gerner-Smidt, John Besser, Jeniffer Concepción-Acevedo, Jason P Folster, Jasmine Huffman, Lavin A Joseph, Zuzana Kucerova, Megin C Nichols, Colin A Schwensohn, and Beth Tolar Frontiers in public health 2019 172 |
| Characterizing the molecular and metabolic mechanisms of insecticide resistance in Anopheles gambiae in Faranah, Guinea. Caleb Stica, Claire L Jeffries, Seth R Irish, Yaya Barry, Denka Camara, Ismael Yansane, Mojca Kristan, Thomas Walker, and Louisa A Messenger Malaria journal 2019 Jul (1) 244 |
| Beyond Public Health Genomics: Can Big Data and Predictive Analytics Deliver Precision Public Health? Muin J Khoury, Michael Engelgau, David A Chambers, and George A Mensah Public health genomics 2019 Jul 1-6 |
| Neuraminidase Inhibitors and Hospital Length of Stay: A Meta-analysis of Individual Participant Data to Determine Treatment Effectiveness Among Patients Hospitalized With Nonfatal 2009 Pandemic Influenza A(H1N1) Virus Infection. Sudhir Venkatesan, Puja R Myles, Kirsty J Bolton, Stella G Muthuri, Tarig Al Khuwaitir, Ashish P Anovadiya, Eduardo Azziz-Baumgartner, Tahar Bajjou, Matteo Bassetti, Bojana Beovic, Barbara Bertisch, Isabelle Bonmarin, Robert Booy, Victor H Borja-Aburto, Heinz Burgmann, Bin Cao, Jordi Carratala, Tserendorj Chinbayar, Catia Cilloniz, Justin T Denholm, Samuel R Dominguez, Pericles A D Duarte, Gal Dubnov-Raz, Sergio Fanella, Zhancheng Gao, Patrick Gérardin, Maddalena Giannella, Sophie Gubbels, Jethro Herberg, Anjarath Lorena Higuera Iglesias, Peter H Hoeger, Xiao Yun Hu, Quazi T Islam, Mirela F Jiménez, Gerben Keijzers, Hossein Khalili, Gabriela Kusznierz, Ilija Kuzman, Eduard Langenegger, Kamran B Lankarani, Yee-Sin Leo, Romina P Libster, Rita Linko, Faris Madanat, Efstratios Maltezos, Abdullah Mamun, Toshie Manabe, Gokhan Metan, Aukse Mickiene, Dragan Mikic, Kristin G I Mohn, Maria E Oliva, Mehpare Ozkan, Dhruv Parekh, Mical Paul, Barbara A Rath, Samir Refaey, Alejandro H Rodríguez, Bunyamin Sertogullarindan, Joanna Skret-Magierlo, Ayper Somer, Ewa Talarek, Julian W Tang, Kelvin To, Dat Tran, Timothy M Uyeki, Wendy Vaudry, Tjasa Vidmar, Paul Zarogoulidis, , and Jonathan S Nguyen-Van-Tam The Journal of infectious diseases 2019 Jul |
| Potential Fifth Clade of Candida auris, Iran, 2018. Nancy A Chow, Theun de Groot, Hamid Badali, Mahdi Abastabar, Tom M Chiller, and Jacques F Meis Emerging infectious diseases 2019 Sep (9) |
| Multistate Outbreak of Listeriosis Associated with Packaged Leafy Green Salads, United States and Canada, 2015-2016. Julie L Self, Amanda Conrad, Steven Stroika, Alikeh Jackson, Laura Whitlock, Kelly A Jackson, Jennifer Beal, Allison Wellman, Marianne K Fatica, Sally Bidol, Paula Pennell Huth, Meghan Hamel, Kristyn Franklin, Lorelee Tschetter, Christine Kopko, Penelope Kirsch, Matthew E Wise, and Colin Basler Emerging infectious diseases 2019 08 (8) 1461-1468 |
| A pharmacokinetic and pharmacogenetic evaluation of contraceptive implants and antiretroviral therapy among women in Kenya and Uganda. Rena C Patel, Randy M Stalter, Katherine K Thomas, Bani Tamraz, Steven W Blue, David W Erikson, Christina J Kim, Edward J Kelley, Kavita Nanda, Athena P Kourtis, Jairam R Lingappa, Nelly Mugo, Jared M Baeten, Kimberly K Scarsi, and AIDS (London, England) 2019 Jul |
| Characterisation of infectious Ebola virus from the ongoing outbreak to guide response activities in the Democratic Republic of the Congo: a phylogenetic and in vitro analysis. Laura K McMullan, Mike Flint, Ayan Chakrabarti, Lisa Guerrero, Michael K Lo, Danielle Porter, Stuart T Nichol, Christina F Spiropoulou, and César Albariño The Lancet. Infectious diseases 2019 Jul |
| Complete Genome Sequence of a Severe Acute Respiratory Syndrome-Related Coronavirus from Kenyan Bats. Ying Tao, and Suxiang Tong Microbiology resource announcements 2019 Jul (28) |
| Rabies Outbreak in Captive Big Brown Bats ( Eptesicus fuscus ) Used in a White-nose Syndrome Vaccine Trial. Rachel C Abbott, Lenore Saindon, Elizabeth A Falendysz, Lauren Greenberg, Lillian Orciari, Panayampalli Subbian Satheshkumar, and Tonie E Rocke Journal of wildlife diseases 2019 Jul |
| Challenges and opportunities for integrating genetic testing into a diagnostic workflow: heritable long QT syndrome as a model. Ira M Lubin, Edward R Lockhart, Julie Frank, Vincent Y See, Sudhir Vashist, and Carol Greene Diagnosis (Berlin, Germany) 2019 Jul |
| Distribution of rotavirus genotypes in the post-vaccine introduction era in Ashaiman, Greater Accra Region, Ghana, 2014-2016. Victor Letsa, Susan Damanka, Francis Dennis, Belinda Lartey, George E Armah, Naga Betrapally, Rashi Gautam, Mathew D Esona, Michael D Bowen, and Osbourne Quaye Journal of medical virology 2019 Jul |
| Outbreak of human monkeypox in Nigeria in 2017-18: a clinical and epidemiological report. Adesola Yinka-Ogunleye, Olusola Aruna, Mahmood Dalhat, Dimie Ogoina, Andrea McCollum, Yahyah Disu, Ibrahim Mamadu, Afolabi Akinpelu, Adama Ahmad, Joel Burga, Adolphe Ndoreraho, Edouard Nkunzimana, Lamin Manneh, Amina Mohammed, Olawunmi Adeoye, Daniel Tom-Aba, Bernard Silenou, Oladipupo Ipadeola, Muhammad Saleh, Ayodele Adeyemo, Ifeoma Nwadiutor, Neni Aworabhi, Patience Uke, Doris John, Paul Wakama, Mary Reynolds, Matthew R Mauldin, Jeffrey Doty, Kimberly Wilkins, Joy Musa, Asheena Khalakdina, Adebayo Adedeji, Nwando Mba, Olubunmi Ojo, Gerard Krause, Chikwe Ihekweazu, and The Lancet. Infectious diseases 2019 Jul |
| On the Origins of a Species: What Might Explain the Rise of Candida auris ? Brendan R Jackson, Nancy Chow, Kaitlin Forsberg, Anastasia P Litvintseva, Shawn R Lockhart, Rory Welsh, Snigdha Vallabhaneni, and Tom Chiller Journal of fungi (Basel, Switzerland) 2019 Jul (3) |
| Increase in Invasive Group A Streptococcal Disease and Emergence of Mucoid Strains in a Pediatric Population: February-June 2017. Lorne W Walker, Lindsay Montoya, Sopio Chochua, Bernard Beall, and Michael Green Open forum infectious diseases 2019 Jul (7) ofz275 |
| Evaluation of an adjuvanted hydrogel-based pDNA nanoparticulate vaccine for rabies prevention and immunocontraception. Amit Bansal, Wael Gamal, Xianfu Wu, Yong Yang, Victoria Olson, and Martin J D'Souza Nanomedicine : nanotechnology, biology, and medicine 2019 Jul 102049 |
| Molecular Analysis of the Complete Genome of a Simian Foamy Virus Infecting Hylobates pileatus (pileated gibbon) Reveals Ancient Co-Evolution with Lesser Apes. Anupama Shankar, Samuel D Sibley, Tony L Goldberg, and William M Switzer Viruses 2019 Jul (7) |
| Influenza passaging annotations: what they tell us and why we should listen. Cory D DuPai, Claire D McWhite, Catherine B Smith, Rebecca Garten, Sebastian Maurer-Stroh, and Claus O Wilke Virus evolution 2019 Jan (1) vez016 |
| Performance of cepheid GeneXpert HIV-1 viral load plasma assay to accurately detect treatment failure: a clinical meta-analysis. Jilian A Sacks, Youyi Fong, Mercedes Perez Gonzalez, Mauro Andreotti, Shrikala Baliga, Nigel Garrett, Jeanne Jordan, Etienne Karita, Smita Kulkarni, Orna Mor, Fausta Mosha, Zibusiso Ndlovu, Jean-Christophe Plantier, Shanmugam Saravanan, Lesley Scott, Trevor Peter, Meg Doherty, Heather Alexander, and Lara Vojnov AIDS (London, England) 2019 Jul |
| Analytical Evaluation of the Microarray-Based FluChip-8G Influenza A+B Assay. Amber W Taylor, Erica D Dawson, Rebecca H Blair, James E Johnson, Amelia H Slinskey, Andrew W Smolak, Evan Toth, Kyle Liikanen, Robert S Stoughton, Catherine Smith, Sarah Talbot, and Kathy L Rowlen Journal of virological methods 2019 Jul 113686 |
| Assessing performance of HRP2 antigen detection for malaria diagnosis in Mozambique. Mateusz M Plucinski, Baltazar Candrinho, Mercia Dimene, James Colborn, Austin Lu, Doug Nace, Rose Zulliger, and Eric Rogier Journal of clinical microbiology 2019 Jul |
| Second WIN International Conference on "Integrated approaches and innovative tools for combating insecticide resistance in vectors of arboviruses", October 2018, Singapore. Vincent Corbel, Claire Durot, Nicole L Achee, Fabrice Chandre, Mamadou B Coulibaly, Jean-Philippe David, Gregor J Devine, Isabelle Dusfour, Dina M Fonseca, John Griego, Waraporn Juntarajumnong, Audrey Lenhart, Shinji Kasai, Ademir J Martins, Catherine Moyes, Lee Ching Ng, João Pinto, Julien F Pompon, Pie Muller, Kamaraju Raghavendra, David Roiz, Hassan Vatandoost, John Vontas, and David Weetman Parasites & vectors 2019 Jul 12(1) 331 |
| Using targeted next-generation sequencing to characterize genetic differences associated with insecticide resistance in Culex quinquefasciatus populations from the southern U.S. Linda Kothera, John Phan, Enas Ghallab, Mark Delorey, Rebecca Clark, and Harry M Savage PloS one 2019 (7) e0218397 |
| Genetic Characterization of Measles and Rubella Viruses Detected Through Global Measles and Rubella Elimination Surveillance, 2016-2018. Kevin E Brown, Paul A Rota, James L Goodson, David Williams, Emily Abernathy, Makoto Takeda, and Mick N Mulders MMWR. Morbidity and mortality weekly report 2019 Jul (26) 587-591 |
| Differentiating New from Newly Detected: Melioidosis in Yap, Federated States of Micronesia. Leisha D Nolen, Eric Lirow, Jay E Gee, Mindy G Elrod, Cari B Kolton, Lindy Liu, William A Bower, Marissa K Person, Maria Marfel, and David D Blaney The American journal of tropical medicine and hygiene 2019 Jul |
| Design and Implementation of Data Exchange Formats for Molecular Detection of Drug-Resistant Tuberculosis. Wilfred Bonney, Sandy F Price, and Roque Miramontes AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science 2019 686-695 |
| Duration of seminal Zika viral RNA shedding in immunocompetent mice inoculated with Asian and African genotype viruses. Erin M McDonald, Nisha K Duggal, Mark J Delorey, James Oksanish, Jana M Ritter, and Aaron C Brault Virology 2019 Jun 5351-10 |
| One hypervirulent clone, sequence type 283, accounts for a large proportion of invasive Streptococcus agalactiae isolated from humans and diseased tilapia in Southeast Asia. Timothy Barkham, Ruth N Zadoks, Mohammad Noor Amal Azmai, Stephen Baker, Vu Thi Ngoc Bich, Victoria Chalker, Man Ling Chau, David Dance, Rama Narayana Deepak, H Rogier Van Doorn, Ramona A Gutierrez, Mark A Holmes, Lan Nguyen Phu Huong, Tse Hsien Koh, Elisabete Martins, Kurosh Mehershahi, Paul Newton, Lee Ching Ng, Nguyen Ngoc Phuoc, Ornuma Sangwichian, Pongpun Sawatwong, Uraiwan Surin, Thean Yen Tan, Wen Ying Tang, Nguyen Vu Thuy, Paul Turner, Manivanh Vongsouvath, Defeng Zhang, Toni Whistler, and Swaine L Chen PLoS neglected tropical diseases 2019 Jun 13(6) e0007421 |
| Interpretation of Whole-Genome Sequencing for Enteric Disease Surveillance and Outbreak Investigation. John M Besser, Heather A Carleton, Eija Trees, Steven G Stroika, Kelley Hise, Matthew Wise, and Peter Gerner-Smidt Foodborne pathogens and disease 2019 Jun |
| PulseNet: Entering the Age of Next-Generation Sequencing. Efrain M Ribot, Molly Freeman, Kelley B Hise, and Peter Gerner-Smidt Foodborne pathogens and disease 2019 Jun |
| Whole-gene analysis of inter-genogroup reassortant rotaviruses from the Dominican Republic: Emergence of equine-like G3 strains and evidence of their reassortment with locally-circulating strains. Eric M Katz, Mathew D Esona, Naga S Betrapally, Lucia A De La Cruz De Leon, Yenny R Neira, Gloria J Rey, and Michael D Bowen Virology 2019 Jun 114-131 |
| The relationship between insecticide resistance, mosquito age and malaria prevalence in Anopheles gambiae s.l. from Guinea. Emma Collins, Natasha M Vaselli, Moussa Sylla, Abdoul H Beavogui, James Orsborne, Gena Lawrence, Ryan E Wiegand, Seth R Irish, Thomas Walker, and Louisa A Messenger Scientific reports 2019 Jun (1) 8846 |
| Development of molecular assays to detect target-site mechanisms associated with insecticide resistance in malaria vectors from Latin America. Juan C Lol, David Castañeda, Lucy Mackenzie-Impoinvil, Carla G Romero, Audrey Lenhart, and Norma R Padilla Malaria journal 2019 Jun 18(1) 202 |
| Emerging Concepts in Precision Medicine and Cardiovascular Diseases in Racial and Ethnic Minority Populations. George A Mensah, Cashell Jaquish, Pothur Srinivas, George J Papanicolaou, Gina S Wei, Nicole Redmond, Megan C Roberts, Cheryl Nelson, Larissa Aviles-Santa, Mona Puggal, Melissa C Green Parker, Mollie A Minear, Whitney Barfield, Kathleen N Fenton, Cheryl Anne Boyce, Michael M Engelgau, and Muin J Khoury Circulation research 2019 Jun 125(1) 7-13 |
| Comparison of Respiratory Specimen Collection Methods for Detection of Influenza Virus Infection by RT-PCR: A Literature Review. Sarah Spencer, Mark G Thompson, Brendan Flannery, and Alicia Fry Journal of clinical microbiology 2019 Jun |
| Sera Antibody Repertoire Analyses Reveal Mechanisms of Broad and Pandemic Strain Neutralizing Responses after Human Norovirus Vaccination. Lisa C Lindesmith, Jonathan R McDaniel, Anita Changela, Raffaello Verardi, Scott A Kerr, Veronica Costantini, Paul D Brewer-Jensen, Michael L Mallory, William N Voss, Daniel R Boutz, John J Blazeck, Gregory C Ippolito, Jan Vinje, Peter D Kwong, George Georgiou, and Ralph S Baric Immunity 2019 Jun 50(6) 1530-1541.e8 |
| Mitochondrial Junction Region as Genotyping Marker for Cyclospora cayetanensis. Fernanda S Nascimento, John R Barta, Julia Whale, Jessica N Hofstetter, Shannon Casillas, Joel Barratt, Eldin Talundzic, Michael J Arrowood, and Yvonne Qvarnstrom Emerging infectious diseases 2019 Jul (7) 1314-1319 |
| Cervical determinants of anal HPV infection and high-grade anal lesions in women: a collaborative pooled analysis. Chunqing Lin, Jiri Slama, Paula Gonzalez, Marc T Goodman, Ningshao Xia, Aimée R Kreimer, Ting Wu, Nancy A Hessol, Yurii Shvetsov, Ana P Ortiz, Beatriz Grinsztejn, Anna-Barbara Moscicki, Isabelle Heard, María Del Refugio González Losa, Erna M Kojic, Maarten F Schim van der Loeff, Feixue Wei, Adhemar Longatto-Filho, Zizipho A Mbulawa, Joel M Palefsky, Annette H Sohn, Brenda Y Hernandez, Katina Robison, Steve Simpson, Lois J Conley, Alexandra de Pokomandy, Marianne A B van der Sande, Racheal S Dube Mandishora, Lays P B Volpini, Alessandra Pierangeli, Byron Romero, Timothy Wilkin, Silvia Franceschi, Carmen Hidalgo-Tenorio, Reshmie A Ramautarsing, Ina U Park, Fernanda K Tso, Sheela Godbole, Kathleen W M D'Hauwers, Borek Sehnal, Lynette J Menezes, Sandra A Heráclio, and Gary M Clifford The Lancet. Infectious diseases 2019 Jun |
| Integrating multiple biomarkers to increase sensitivity for the detection of Onchocerca volvulus infection. Sasisekhar Bennuru, Georgiette Oduro-Boateng, Chinweoke Osigwe, Priscilla Del-Valle, Allison Golden, Guilherme Maerschner Ogawa, Vitaliano Cama, Sara Lustigman, and Thomas B Nutman The Journal of infectious diseases 2019 Jun |
| Downgrading disease transmission risk estimates using terminal importations. Spencer J Fox, Steven E Bellan, T Alex Perkins, Michael A Johansson, and Lauren Ancel Meyers PLoS neglected tropical diseases 2019 Jun 13(6) e0007395 |
| Draft Genome Sequence of Kroppenstedtia sanguinis X0209 T , a Clinical Isolate Recovered from Human Blood. Robert A Arthur, Ainsley C Nicholson, Ben W Humrighouse, John R McQuiston, and Brent A Lasker Microbiology resource announcements 2019 Jun 8(24) |
| Pneumococcal lineages associated with serotype replacement and antibiotic resistance in childhood invasive pneumococcal disease in the post-PCV13 era: an international whole-genome sequencing study. Stephanie W Lo, Rebecca A Gladstone, Andries J van Tonder, John A Lees, Mignon du Plessis, Rachel Benisty, Noga Givon-Lavi, Paulina A Hawkins, Jennifer E Cornick, Brenda Kwambana-Adams, Pierra Y Law, Pak Leung Ho, Martin Antonio, Dean B Everett, Ron Dagan, Anne von Gottberg, Keith P Klugman, Lesley McGee, Robert F Breiman, Stephen D Bentley, and The Lancet. Infectious diseases 2019 Jun |
| Sepsis Attributed to Bacterial Contamination of Platelets Associated with a Potential Common Source - Multiple States, 2018. Sydney A Jones, Jefferson M Jones, Vivian Leung, Allyn K Nakashima, Kelly F Oakeson, Amanda R Smith, Robert Hunter, Janice J Kim, Melissa Cumming, Eileen McHale, Pampee P Young, Joy L Fridey, Walter E Kelley, Susan L Stramer, Stephen J Wagner, F Bernadette West, Ross Herron, Edward Snyder, Jeanne E Hendrickson, David R Peaper, Adi V Gundlapalli, Charles Langelier, Steve Miller, Ashok Nambiar, Morvarid Moayeri, Jack Kamm, Heather Moulton-Meissner, Pallavi Annambhotla, Paige Gable, Gillian A McAllister, Erin Breaker, Erisa Sula, Alison Laufer Halpin, and Sridhar V Basavaraju MMWR. Morbidity and mortality weekly report 2019 Jun (23) 519-523 |
| Use of Whole-Genome Sequencing for Food Safety and Public Health in the United States. Eric Brown, Uday Dessai, Sherri McGarry, and Peter Gerner-Smidt Foodborne pathogens and disease 2019 Jun |
| Differential gene regulation in human small airway epithelial cells grown in monoculture versus coculture with human microvascular endothelial cells following multiwalled carbon nanotube exposure. Brandi N Snyder-Talkington, Chunlin Dong, Vincent Castranova, Yong Qian, and Nancy L Guo Toxicology reports 2019 6482-488 |
| Influenza virus-related critical illness: prevention, diagnosis, treatment. Eric J Chow, Joshua D Doyle, and Timothy M Uyeki Critical care (London, England) 2019 Jun 23(1) 214 |
| Detection of oseltamivir-resistant zoonotic and animal influenza A viruses using the rapid influenza antiviral resistance test. Erin N Hodges, Vasiliy P Mishin, Juan De La Cruz, Zhu Guo, Ha T Nguyen, Eric Fallows, James Stevens, David E Wentworth, Charles Todd Davis, and Larisa V Gubareva Influenza and other respiratory viruses 2019 Jun |
| Emerging Novel GII.P16 Noroviruses Associated with Multiple Capsid Genotypes. Leslie Barclay, Jennifer L Cannon, Mary E Wikswo, Annie R Phillips, Hannah Browne, Anna M Montmayeur, Roman L Tatusov, Rachel M Burke, Aron J Hall, and Jan Vinjé Viruses 2019 Jun (6) |
| Duplex Real-Time RT-PCR Assay for Detection and Subgroup-Specific Identification of Human Respiratory Syncytial Virus. Lijuan Wang, Pedro Piedra, Vasanthi Avadhanula, Edison L Durigon, Ann Machablishvili, María-Renée López, Natalie Thornburg, and Teresa C T Peret Journal of virological methods 2019 Jun 113676 |
| Detection of highly pathogenic avian influenza A(H5N6) viruses in waterfowl in Bangladesh. Genyan Yang, Sukanta Chowdury, Erin Hodges, Mohammed Ziaur Rahman, Yunho Jang, Mohammad Enayet Hossain, Joyce Jones, Thomas J Stark, Han Di, Peter W Cook, Sumon Ghosh, Eduardo Azziz-Baumgartner, John R Barnes, David E Wentworth, Erin Kennedy, and C Todd Davis Virology 2019 May 36-44 |
| Family History-Wide Association Study ("FamWAS") for Identifying Clinical and Environmental Risk Factors for Common Chronic Diseases. Danielle Rasooly, John P A Ioannidis, Muin J Khoury, and Chirag J Patel American journal of epidemiology 2019 Jun |
| Enhanced vector surveillance to control arbovirus epidemics in Colombia. Sarah Anne J Guagliardo, Susana Carolina Ardila Roldan, Liliana Santacoloma, Cesar Luna, Juan Manuel Cordovez Alvarez, Juan David Rojas Gacha, Mariana Mansur, Rebecca S Levine, Audrey Lenhart, and Patricia Fuya Oviedo Revista panamericana de salud publica = Pan American journal of public health 2019 43e50 |
| Pyrethroid exposure alters internal and cuticle surface bacterial communities in Anopheles albimanus. Nsa Dada, Juan C Lol, Ana Cristina Benedict, Francisco López, Mili Sheth, Nicole Dzuris, Norma Padilla, and Audrey Lenhart The ISME journal 2019 Jun |
| Metagenomic Approaches for Public Health Surveillance of Foodborne Infections: Opportunities and Challenges. Heather A Carleton, John Besser, Amanda J Williams-Newkirk, Andrew Huang, Eija Trees, and Peter Gerner-Smidt Foodborne pathogens and disease 2019 Jun |
| Candida auris : An Emerging Yeast Pathogen Posing Distinct Challenges for Laboratory Diagnostics, Treatment, and Infection Prevention. D Jane Hata, Romney Humphries, Shawn R Lockhart, and Archives of pathology & laboratory medicine 2019 Jun |
| Entropy of mitochondrial DNA circulating in blood is associated with hepatocellular carcinoma. David S Campo, Vishal Nayak, Ganesh Srinivasamoorthy, and Yury Khudyakov BMC medical genomics 2019 Jun 12(Suppl 4) 74 |
| Potential risk factors for Ebstein anomaly, National Birth Defects Prevention Study, 1997-2011. Karrie F Downing, Tiffany Riehle-Colarusso, Suzanne M Gilboa, Angela E Lin, Matthew E Oster, Sarah C Tinker, Sherry L Farr, and Cardiology in the young 2019 Jun 1-9 |
| Emergent Invasive Group A Streptococcus dysgalactiae subsp. Equisimilis, United States, 2015-2018. Sopio Chochua, Joy Rivers, Saundra Mathis, Zhongya Li, Srinivasan Velusamy, Lesley McGee, Chris Van Beneden, Yuan Li, Benjamin J Metcalf, and Bernard Beall Emerging infectious diseases 2019 Aug (8) |
| A chromosome-scale assembly of the major African malaria vector Anopheles funestus. Jay Ghurye, Sergey Koren, Scott T Small, Seth Redmond, Paul Howell, Adam M Phillippy, and Nora J Besansky GigaScience 2019 Jun (6) |
| A Systematic Approach to Identify and Characterize the Effectiveness and Safety of Novel Probiotic Strains to Control Foodborne Pathogens. Diana I Ayala, Peter W Cook, Jorge G Franco, Marie Bugarel, Kameswara R Kottapalli, Guy H Loneragan, Mindy M Brashears, and Kendra K Nightingale Frontiers in microbiology 2019 101108 |
| Protection from lethal Lassa disease can be achieved both before and after virus exposure by administration of single-cycle replicating Lassa virus replicon particles. Markus H Kainulainen, Jessica R Spengler, Stephen R Welch, JoAnn D Coleman-McCray, Jessica R Harmon, Florine E M Scholte, Cynthia S Goldsmith, Stuart T Nichol, César G Albariño, and Christina F Spiropoulou The Journal of infectious diseases 2019 Jun |
| Heterologous prime-boost with A(H5N1) pandemic influenza vaccines induces broader cross-clade antibody responses than homologous prime-boost. Min Z Levine, Crystal Holiday, Stacie Jefferson, F Liaini Gross, Feng Liu, Sheng Li, Damien Friel, Philippe Boutet, Bruce L Innis, Corey P Mallett, Terrence M Tumpey, James Stevens, and Jacqueline M Katz NPJ vaccines 2019 422 |
| Genotyping Genetically Heterogeneous Cyclospora cayetanensis Infections to Complement Epidemiological Case Linkage. Joel L N Barratt, Subin Park, Fernanda S Nascimento, Jessica Hofstetter, Mateusz Plucinski, Shannon Casillas, Richard S Bradbury, Michael J Arrowood, Yvonne Qvarnstrom, and Eldin Talundzic Parasitology 2019 May 1-33 |
| Multi-Walled Carbon Nanotube-Induced Gene Expression Biomarkers for Medical and Occupational Surveillance. Brandi N Snyder-Talkington, Chunlin Dong, Salvi Singh, Rebecca Raese, Yong Qian, Dale W Porter, Michael G Wolfarth, and Nancy L Guo International journal of molecular sciences 2019 May 20(11) |
| Practical Guidance to Implementing Quality Management Systems in Public Health Laboratories Performing Next Generation Sequencing: Personnel, Equipment, and Process Management (Phase 1). Rebecca J Hutchins, Kristy L Phan, Adeeba Saboor, Joseph D Miller, Atis Muehlenbachs, and Journal of clinical microbiology 2019 May |
| A Laboratory Medicine Best Practices Systematic Review and Meta-analysis of Nucleic Acid Amplification Tests (NAATs) and Algorithms Including NAATs for the Diagnosis of Clostridioides ( Clostridium ) difficile in Adults. Colleen S Kraft, J Scott Parrott, Nancy E Cornish, Matthew L Rubinstein, Alice S Weissfeld, Peggy McNult, Irving Nachamkin, Romney M Humphries, Thomas J Kirn, Jennifer Dien Bard, Joseph D Lutgring, Jonathan C Gullett, Cassiana E Bittencourt, Susan Benson, April M Bobenchik, Robert L Sautter, Vickie Baselski, Michel C Atlas, Elizabeth M Marlowe, Nancy S Miller, Monika Fischer, Sandra S Richter, Peter Gilligan, and James W Snyder Clinical microbiology reviews 2019 Jun (3) |
| Bedaquiline Microheteroresistance after Cessation of Tuberculosis Treatment. Margaretha de Vos, Serej D Ley, Kristin B Wiggins, Brigitta Derendinger, Anzaan Dippenaar, Melanie Grobbelaar, Anja Reuter, Tania Dolby, Scott Burns, Marco Schito, David M Engelthaler, John Metcalfe, Grant Theron, Annelies van Rie, James Posey, Rob Warren, and Helen Cox The New England journal of medicine 2019 380(22) 2178-2180 |
| Technology for the prevention of antimicrobial resistance and healthcare-associated infections; 2017 Geneva IPC-Think Tank (Part 2). Walter Zingg, Benjamin J Park, Julie Storr, Raheelah Ahmad, Carolyn Tarrant, Enrique Castro-Sanchez, Eli Perencevich, Andreas Widmer, Karl-Heinz Krause, Claire Kilpatrick, Sara Tomczyk, Benedetta Allegranzi, Denise Cardo, Didier Pittet, and Antimicrobial resistance and infection control 2019 883 |
| Historical and genomic data reveal the influencing factors on global transmission velocity of plague during the Third Pandemic. Lei Xu, Leif C Stige, Herwig Leirs, Simon Neerinckx, Kenneth L Gage, Ruifu Yang, Qiyong Liu, Barbara Bramanti, Katharine R Dean, Hui Tang, Zhe Sun, Nils Chr Stenseth, and Zhibin Zhang Proceedings of the National Academy of Sciences of the United States of America 2019 May |
| Vagococcus bubulae sp. nov., isolated from ground beef, and Vagococcus vulneris sp. nov., isolated from a human foot wound. Patricia L Shewmaker, Anne M Whitney, Christopher A Gulvik, Ben W Humrighouse, Jarrett Gartin, Hercules Moura, John R Barr, Edward R B Moore, Roger Karlsson, Tatiana C A Pinto, and Lucia M Teixeira International journal of systematic and evolutionary microbiology 2019 May |
| Evolution of P[8], P[4], and P[6] VP8* genes of human rotaviruses globally reported during 1974 and 2017: possible implications for rotavirus vaccines in development. Daniel E Velasquez, and Baoming Jiang Human vaccines & immunotherapeutics 2019 Jun 1-6 |
| Preventive care services and health behaviors in children with fragile X syndrome. Kendra E Gilbertson, Hannah L Jackson, Eric J Dziuban, Stephanie L Sherman, Elizabeth M Berry-Kravis, Craig A Erickson, and Rodolfo Valdez Disability and health journal 2019 May |
| Comparative analysis reveals conservation in genome organization among intestinal Cryptosporidium species and sequence divergence in potential secreted pathogenesis determinants among major human-infecting species. Zhixiao Xu, Yaqiong Guo, Dawn M Roellig, Yaoyu Feng, and Lihua Xiao BMC genomics 2019 May (1) 406 |
| Cholera in the Americas: Foodborne Aspects. Tanja Popovic, Ørjan Olsvik, Paul A Blake, and Kaye Wachsmuth Journal of food protection 1993 Sep 56(9) 811-821 |
| Patterns of inter- and intrasubspecific homologous recombination inform eco-evolutionary dynamics of Xylella fastidiosa. Neha Potnis, Prem P Kandel, Marcus V Merfa, Adam C Retchless, Jennifer K Parker, Drake C Stenger, Rodrigo P P Almeida, Maria Bergsma-Vlami, Marcel Westenberg, Paul A Cobine, and Leonardo De La Fuente The ISME journal 2019 May |
| Technology-Enabled Outreach to Patients Taking High-Risk Medications Reduces a Quality Gap in Completion of Clinical Laboratory Testing. Marsha A Raebel, Susan M Shetterly, Bharati Bhardwaja, Andrew T Sterrett, Emily B Schroeder, Joseph Chorny, Tyson P Hagen, David J Silverman, Rex Astles, and Ira M Lubin Population health management 2019 May |
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