Skip directly to search
Skip directly to A to Z list
Skip directly to navigation
Skip directly to page options
Skip directly to site content
Start of Search Controls
Search Form Controls
Search The CDC
submit
CDC A-Z Index
MENU
CDC A-Z
SEARCH
A
B
C
D
E
F
G
H
I
J
K
L
M
N
O
P
Q
R
S
T
U
V
W
X
Y
Z
#
Search Form Controls
Search The CDC
submit
CDC A-Z Index
Public Health Genomics and Precision Health Knowledge Base (v10.0)
PHGKB
About
Public Health Genomics Branch
PHGKB Weekly Horizon Scan
Genomics Precision Health Scan
Advanced Molecular Detection Clips
Non-Genomics Precision Health Scan
CDC-authored Publications Scan
Specialized PHGKB
Cancer PHGKB
Diabetes PHGKB
Economic Evaluation PHGKB
Environmental Health PHGKB
Family Health History PHGKB
Health Equity PHGKB
HLBS-PopOmics
Infectious Diseases PHGKB
Implementation Science PHGKB
Neurological Disorders PHGKB
Pharmacogenomics PHGKB
Primary Immune Deficiency Diseases PHGKB
Rare Diseases PHGKB
Reproductive and Child Health PHGKB
All Databases
COVID-19 GPH (50254)
CDC/NIH Web Information Database (32266)
CDC-Authored Genomics and Precision Health Publications Database (6432)
Precision Health Database (64289)
Pathogen Advanced Molecular Detection Database (28063)
All of Us Reports and Publications Database (1198)
Human Genome Epidemiology
Human Genome Epidemiology Literature Finder (233998)
Epigenetic Epidemiology Publications Database (23950)
Release Note
Contact Us
CDC-Authored Genomics and Precision Health Publications Database|Home|Public Health Genomics and Precision Health Knowledge Base (PHGKB)
CDC-Authored Genomics and Precision Health Publications Database
Facebook Reccomend
Twitter Tweet
Share
Compartir
Pinterest
Linked In
Email
Digg
Add this to your site
Last data update: Dec 02, 2024
. (Total: 6432 publications)
All
Cancer
Diabetes
Economic
Equity
Environmental
FHH
HLBS
ID
Implementation
ND
PGx
PI
Rare
RCH
dataset
Filtered By:
Select to fine-tune your search
Year
Journal
Next
Records 1-30 (of 148 Records)
Query Trace:
Foodborne[original query]
A bi-national sample-initiated retrospective outbreak investigation of Listeria monocytogenes infections in the United States and Canada linked to enoki mushrooms imported from China 2022-2023
Kirchner M
,
Palacios A
,
Cataldo N , Allen KL , Wellman A , Madad A , Jemaneh T , Jackson T , Ingram DT , Wagoner V , Hatch R , Baugher J , Burall L , Nieves K ,
Low M
,
Pederson G
,
DiPrete L , Sepcic V , Thomas D , Lozinak K , Urban S , Shannon K , Kafka E , Lackey A , Edwards L , Rosen HE , Bond C , Needham M , Locas A , Markell A , Chau K , Kong A , Hamel M , Kearney A , Salter M , Gieraltowski L , Bazaco MC , Viazis S , Conrad A .
J Food Prot 2024 100413
Conditional expression of flagellar motility, curli fimbriae, and biofilms in Shiga toxin- producing Escherichia albertii
Carter MQ , Carychao D ,
Lindsey RL
.
Front Microbiol 2024 15 1456637
Genetic diversity in Salmonella enterica in outbreaks of foodborne and zoonotic origin in the USA in 2006-2017
Trees E ,
Carleton HA
,
Folster JP
,
Gieraltowski L
,
Hise K
,
Leeper M
,
Nguyen TA
,
Poates A ,
Sabol A
,
Tagg KA
,
Tolar B
,
Vasser M
,
Webb HE
,
Wise M
,
Lindsey RL
.
Microorganisms 2024 12 (8)
Evaluation of coccidia DNA in irrigation pond water and wastewater sludge associated with Cyclospora cayetanensis 18S rRNA gene qPCR detections
Hofstetter J , Arfken A ,
Kahler A
,
Qvarnstrom Y , Rodrigues C ,
Mattioli M
.
Microbiol Spectr 2024 e0090624
Syndromic gastrointestinal panel diagnostic tests have changed our understanding of the epidemiology of yersiniosis-Foodborne Diseases Active Surveillance Network, 2010-2021
Ray LC
,
Payne DC
,
Rounds J , Trevejo RT , Wilson E , Burzlaff K , Garman KN , Lathrop S , Rissman T , Wymore K , Wozny S , Wilson S ,
Francois Watkins LK
,
Bruce BB
,
Weller DL
.
Open Forum Infect Dis 2024 11 (6) ofae199
4
4
Total citations
4
Recent citations
n/a
Field Citation Ratio
n/a
Relative Citation Ratio
Evaluation of the increased genetic resolution and utility for source tracking of a recently developed method for genotyping cyclospora cayetanensis
Leonard SR , Mammel MK , Almeria S , Gebru ST ,
Jacobson DK
,
Peterson AC
,
Barratt JLN
,
Musser SM .
Microorganisms 2024 12 (5)
Genomic and phenotypic characterization of shiga toxin-producing Escherichia albertii strains isolated from wild birds in a major agricultural region in California
Carter MQ , Quiñones B , He X , Pham A , Carychao D , Cooley MB , Lo CC , Chain PSG ,
Lindsey RL
,
Bono JL .
Microorganisms 2023 11 (11)
2
2
Total citations
2
Recent citations
n/a
Field Citation Ratio
n/a
Relative Citation Ratio
Evaluation of whole and core genome multilocus sequence typing allele schemes for Salmonella enterica outbreak detection in a national surveillance network, PulseNet USA
Leeper MM
,
Tolar BM
,
Griswold T
,
Vidyaprakash E
,
Hise KB
,
Williams GM
,
Im SB
,
Chen JC
,
Pouseele H ,
Carleton HA
.
Front Microbiol 2023 14 1254777
9
9
Total citations
9
Recent citations
n/a
Field Citation Ratio
n/a
Relative Citation Ratio
An improved framework for detecting discrete epidemiologically meaningful partitions in hierarchically clustered genetic data
Jacobson DK
,
Low R
,
Plucinski MM
,
Barratt JLN
.
Bioinform Adv 2023 3 (1) vbad118
2
2
Total citations
2
Recent citations
n/a
Field Citation Ratio
n/a
Relative Citation Ratio
Predicting food sources of Listeria monocytogenes based on genomic profiling using random forest model
Gu W
,
Cui Z
,
Stroika S
,
Carleton HA
,
Conrad A
,
Katz LS
,
Richardson LC
,
Hunter J
,
Click ES
,
Bruce BB
.
Foodborne Pathog Dis 2023 20 (12) 579-586
3
3
Total citations
3
Recent citations
n/a
Field Citation Ratio
n/a
Relative Citation Ratio
The limit of detection of the BioFire FilmArray gastrointestinal panel for the foodborne parasite Cyclospora cayetanensis
Peterson A
,
Richins T
,
Houghton K
,
Mishina M
,
Sharma S
,
Sambhara S
,
Jacobson D
,
Qvarnstrom Y
,
Cama V
.
Diagn Microbiol Infect Dis 2023 107 (2) 116030
2
2
Total citations
2
Recent citations
n/a
Field Citation Ratio
n/a
Relative Citation Ratio
Evaluation of the Illumina iSeq whole genome sequencing system for enteric disease surveillance and outbreak detection
Trees E
,
Poates A
,
Sabol A
,
LaFon P
,
Truong J
,
Lindsey R
.
J Microbiol Methods 2023 211 106784
1
1
Total citation
1
Recent citation
n/a
Field Citation Ratio
n/a
Relative Citation Ratio
Cyclospora cayetanensis comprises at least three species that cause human cyclosporiasis
Barratt JLN
,
Shen J
,
Houghton K
,
Richins T
,
Sapp SGH
,
Cama V
,
Arrowood MJ
,
Straily A
,
Qvarnstrom Y
.
Parasitology 2023 150 (3) 269-285
19
19
Total citations
19
Recent citations
6.31
Field Citation Ratio
9.5
Relative Citation Ratio
Multinational outbreak of Listeria monocytogenes infections linked to enoki mushrooms imported from The Republic of Korea 2016-2020
Pereira E ,
Conrad A
,
Tesfai A ,
Palacios A
,
Kandar R , Kearney A , Locas A , Jamieson F , Elliot E ,
Otto M
,
Kurdilla K , Tijerina M , Son I , Pettengill JB , Chen Y , Fox T , Lane C , Aguillon R ,
Huffman J
,
Sheau Fong Low M
,
Wise M
,
Edwards L , Bidol S , Blankenship HM , Rosen HE , Leclercq A , Lecuit M , Tourdjman M , Herber H , Singleton LS , Viazis S , Bazaco MC .
J Food Prot 2023 86 (7) 100101
13
13
Total citations
13
Recent citations
n/a
Field Citation Ratio
n/a
Relative Citation Ratio
Corrigendum: Whole Genome Sequencing: Bridging One-Health Surveillance of Foodborne Diseases.
Gerner-Smidt P
,
Besser J
,
Concepción-Acevedo J
,
Folster JP
,
Huffman J
,
Joseph LA
,
Kucerova Z
,
Nichols MC
,
Schwensohn CA
,
Tolar B
.
Front Public Health 2019 7 365
5
5
Total citations
3
Recent citations
1.3
Field Citation Ratio
0.36
Relative Citation Ratio
Antimicrobial-resistant nontyphoidal Salmonella infection following international travel - United States, 2018-2019
Ford L
,
Shah HJ
,
Eikmeier D , Hanna S ,
Chen J
,
Tagg KA
,
Langley G
,
Payne DC
,
Plumb ID
.
J Infect Dis 2023 228 (5) 533-541
1
1
Total citation
1
Recent citation
n/a
Field Citation Ratio
n/a
Relative Citation Ratio
Evaluation of core genome and whole genome multilocus sequence typing schemes for Campylobacter jejuni and Campylobacter coli outbreak detection in the USA
Joseph LA
,
Griswold T
,
Vidyaprakash E
,
Im SB
,
Williams GM
,
Pouseele HA ,
Hise KB
,
Carleton HA
.
Microb Genom 2023 9 (5)
9
9
Total citations
9
Recent citations
n/a
Field Citation Ratio
n/a
Relative Citation Ratio
An Overview of Foodborne Sample-Initiated Retrospective Outbreak Investigations and Interagency Collaboration in the United States.
Wellman A , Bazaco M , Blessington T , Pightling A , Dwarka A , Hintz L ,
Wise ME
,
Gieraltowski L
,
Conrad A
,
Nguyen TA
,
Hise K
,
Viazis S , Beal J .
J Food Prot 2023 86 (6) 100089
9
9
Total citations
9
Recent citations
n/a
Field Citation Ratio
n/a
Relative Citation Ratio
Salmonella Outbreaks Linked to Beef, United States, 2012-2019.
Canning M
,
Birhane MG
,
Dewey-Mattia D
,
Lawinger H
,
Cote A ,
Gieraltowski L
,
Schwensohn C
,
Tagg KA
,
Francois Watkins LK
,
Park Robyn M
,
Marshall KE
.
J Food Prot 2023 86 (5) 100071
20
20
Total citations
20
Recent citations
n/a
Field Citation Ratio
n/a
Relative Citation Ratio
An Outbreak Investigation of Vibrio parahaemolyticus Infections in the United States Linked to Crabmeat Imported from Venezuela: 2018.
Seelman SL , Whitney BM ,
Stokes EK
,
Elliot EL ,
Griswold T
,
Patel K
,
Bloodgood S , Jones JL , Cripe J , Cornell J , Luo Y , Williams DL , Boyle MM , Cahoon J , Brennan C , Wildey LM , Grover VM , Simonson S , Crosby AJ , Bazaco MC , Viazis S .
Foodborne Pathog Dis 2023 20 (4) 123-131
6
6
Total citations
6
Recent citations
n/a
Field Citation Ratio
n/a
Relative Citation Ratio
Optimizing hierarchical tree dissection parameters using historic epidemiologic data as 'ground truth'.
Jacobson D
,
Barratt J
.
PLoS One 2023 18 (2) e0282154
2
2
Total citations
2
Recent citations
n/a
Field Citation Ratio
n/a
Relative Citation Ratio
Draft Genome Sequences of 20 Clostridium botulinum Type A Isolates from Foodborne Botulism Outbreaks.
Halpin JL
,
Gómez GA
,
Dykes JK
,
Lúquez C
.
Microbiol Resour Announc 2023 12 (1) e0086822
1
1
Total citation
1
Recent citation
n/a
Field Citation Ratio
n/a
Relative Citation Ratio
Horizontal Gene Transfer and Loss of Serotype-Specific Genes in Listeria monocytogenes Can Lead to Incorrect Serotype Designations with a Commonly-Employed Molecular Serotyping Scheme.
Brown P ,
Kucerova Z
,
Gorski L , Chen Y , Ivanova M , Leekitcharoenphon P , Parsons C , Niedermeyer J , Jackson J , Kathariou S .
Microbiol Spectr 2022 11 (1) e0274522
6
6
Total citations
6
Recent citations
1.99
Field Citation Ratio
2.11
Relative Citation Ratio
Bi-national Outbreak of Salmonella Newport Infections Linked to Onions: the United States Experience.
McCormic ZD
,
Patel K
,
Higa J , Bancroft J , Donovan D , Edwards L , Cheng J , Adcock B , Bond C , Pereira E , Doyle M ,
Wise ME
,
Gieraltowski L
.
Epidemiol Infect 2022 150 1-23
8
8
Total citations
8
Recent citations
5.11
Field Citation Ratio
1.49
Relative Citation Ratio
Genomic Diversity, Antimicrobial Resistance, and Virulence Gene Profiles of Salmonella Serovar Kentucky Isolated from Humans, Food, and Animal Ceca Content Sources in the United States.
Tate H , Hsu CH ,
Chen JC
,
Han J , Foley SL ,
Folster JP
,
Francois Watkins LK
,
Reynolds J
,
Tillman GE , Nyirabahizi E , Zhao S .
Foodborne Pathog Dis 2022 19 (8) 509-521
16
16
Total citations
15
Recent citations
4.88
Field Citation Ratio
2.89
Relative Citation Ratio
The power, potential, benefits, and challenges of implementing high-throughput sequencing in food safety systems.
Imanian B , Donaghy J , Jackson T , Gummalla S , Ganesan B , Baker RC , Henderson M , Butler EK , Hong Y , Ring B , Thorp C , Khaksar R , Samadpour M , Lawless KA , MacLaren-Lee I ,
Carleton HA
,
Tian R , Zhang W , Wan J .
NPJ Sci Food 2022 6 (1) 35
22
22
Total citations
20
Recent citations
6.71
Field Citation Ratio
1.99
Relative Citation Ratio
Changing Diagnostic Testing Practices for Foodborne Pathogens, Foodborne Diseases Active Surveillance Network, 2012-2019.
Ray LC
,
Griffin PM
,
Wymore K , Wilson E , Hurd S , LaClair B , Wozny S , Eikmeier D , Nicholson C , Burzlaff K , Hatch J , Fankhauser M , Kubota K ,
Huang JY
,
Geissler A
,
Payne DC
,
Tack DM
.
Open Forum Infect Dis 2022 9 (8) ofac344
13
13
Total citations
12
Recent citations
8.3
Field Citation Ratio
2.03
Relative Citation Ratio
A 2019 Outbreak Investigation of Hepatitis A Virus Infections in the United States Linked to Imported Fresh Blackberries.
McClure M , Nsubuga J ,
Montgomery MP
,
Jenkins E , Crosby A , Schoelen D ,
Basler C
,
Ramachandran S
,
Lin Y
,
Xia GL
,
Khudaykov Y
,
Suktankar V , Wagley A , Thomas V , Woods J , Hintz L , Oliveira J , Sandoval AL , Frederick J , Hendrickson B , Gieraltowski L , Viazis S .
Food Environ Virol 2022 14 (3) 236-245
7
7
Total citations
7
Recent citations
2
Field Citation Ratio
1.45
Relative Citation Ratio
Sequencing of Enteric Bacteria: Library Preparation Procedure Matters for Accurate Identification and Characterization.
Poates A
,
Truong J ,
Lindsey R
,
Griswold T
,
Williams-Newkirk AJ
,
Carleton H
,
Trees E
.
Foodborne Pathog Dis 2022 19 (8) 569-578
4
4
Total citations
4
Recent citations
1.22
Field Citation Ratio
0.56
Relative Citation Ratio
Longitudinal surveillance and comparative characterization of Escherichia albertii in wild raccoons in the United States.
Hinenoya A , Wang H , Patrick EM , Zeng X , Cao L , Li XP ,
Lindsey RL
,
Gillespie B , He Q , Yamasaki S , Lin J .
Microbiol Res 2022 262 127109
6
6
Total citations
5
Recent citations
1.71
Field Citation Ratio
0.77
Relative Citation Ratio
File Formats Help:
How do I view different file formats (PDF, DOC, PPT, MPEG) on this site?
Adobe PDF file
Microsoft PowerPoint file
Microsoft Word file
Microsoft Excel file
Audio/Video file
Apple Quicktime file
RealPlayer file
Text file
Zip Archive file
SAS file
ePub file
Page last reviewed:
Feb 1, 2024
Content source:
Public Health Genomics Branch in the Division of Blood Disorders and Public Health Genomics
,
National Center on Birth Defects and Developmental Disabilities
TOP
Posted by
8
X users
3
readers on Mendeley
See more details
Blogged by
1
Posted by
13
X users
13
readers on Mendeley
See more details
Posted by
2
X users
20
readers on Mendeley
See more details
Posted by
1
X users
4
readers on Mendeley
See more details
Posted by
3
X users
6
readers on Mendeley
See more details
Posted by
1
X users
5
readers on Mendeley
See more details
Posted by
2
X users
2
readers on Mendeley
See more details
Posted by
2
X users
7
readers on Mendeley
See more details
Picked up by
2
news outlets
Blogged by
1
Posted by
2
X users
46
readers on Mendeley
See more details
Referenced in
1
policy sources
Posted by
1
X users
19
readers on Mendeley
See more details
Posted by
7
X users
See more details
Posted by
9
X users
46
readers on Mendeley
See more details
Posted by
1
X users
20
readers on Mendeley
See more details
Posted by
1
X users
1
readers on Mendeley
See more details
Posted by
8
X users
4
readers on Mendeley
See more details
Referenced in
1
policy sources
Posted by
1
X users
11
readers on Mendeley
See more details
Posted by
2
X users
10
readers on Mendeley
See more details
Posted by
2
X users
13
readers on Mendeley
See more details
Posted by
3
X users
11
readers on Mendeley
See more details
Posted by
5
X users
21
readers on Mendeley
See more details
Picked up by
2
news outlets
Blogged by
2
Posted by
2
X users
28
readers on Mendeley
See more details