CDC-Authored Genomics and Precision Health Publications Database
Last data update: Jan 21, 2025. (Total: 6495 publications)
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Traceback and testing of food epidemiologically linked to a norovirus outbreak at a wedding reception
Papafragkou E , Kita-Yarbro A , Yang Z , Chhabra P , Davis T , Blackmore J , Ziemer C , Klos R , Hall AJ , Vinjé J . J Food Prot 2024 100395 |
Genomic surveillance for SARS-CoV-2 variants: Circulation of Omicron XBB and JN.1 lineages - United States, May 2023-September 2024
Ma KC , Castro J , Lambrou AS , Rose EB , Cook PW , Batra D , Cubenas C , Hughes LJ , MacCannell DR , Mandal P , Mittal N , Sheth M , Smith C , Winn A , Hall AJ , Wentworth DE , Silk BJ , Thornburg NJ , Paden CR . MMWR Morb Mortal Wkly Rep 2024 73 (42) 938-945 |
Assessing attitudes and knowledge of mpox vaccine among unvaccinated men who have sex with men
Green CJ , Hall GC , Kachur R , Finley E , Furness BW , Merritt M , Lewis FMT . Sex Transm Dis 2024 |
Who gets sick from COVID-19? Sociodemographic correlates of severe adult health outcomes during Alpha- and Delta-variant predominant periods, 9/2020-11/2021
Wei SC , Freeman D , Himschoot A , Clarke KEN , Van Dyke ME , Adjemian J , Ahmad FB , Benoit TJ , Berney K , Gundlapalli AV , Hall AJ , Havers F , Henley SJ , Hilton C , Johns D , Opsomer JD , Pham HT , Stuckey MJ , Taylor CA , Jones JM . J Infect Dis 2024 229 (1) 122-132 |
Carbapenem-resistant Acinetobacter baumannii complex in the United States - an epidemiological and molecular description of isolates collected through the Emerging Infections Program, 2019
Bulens SN , Campbell D , McKay SL , Vlachos N , Burgin A , Burroughs M , Padila J , Grass JE , Jacob JT , Smith G , Muleta DB , Maloney M , Macierowski B , Wilson LE , Vaeth E , Lynfield R , O'Malley S , Snippes Vagnone PM , Dale J , Janelle SJ , Czaja CA , Johnson H , Phipps EC , Flores KG , Dumyati G , Tsay R , Beldavs ZG , Maureen Cassidy P , Hall A , Walters MS , Guh AY , Magill SS , Lutgring JD . Am J Infect Control 2024 |
Plasmodium falciparum pfhrp2 and pfhrp3 gene deletions among patients enrolled at 100 health facilities throughout Tanzania: February to July 2021
Rogier E , Battle N , Bakari C , Seth MD , Nace D , Herman C , Barakoti A , Madebe RA , Mandara CI , Lyimo BM , Giesbrecht DJ , Popkin-Hall ZR , Francis F , Mbwambo D , Garimo I , Aaron S , Lusasi A , Molteni F , Njau R , Cunningham JA , Lazaro S , Mohamed A , Juliano JJ , Bailey JA , Udhayakumar V , Ishengoma DS . Sci Rep 2024 14 (1) 8158 |
Pregnancy and infant outcomes following SARS-CoV-2 infection in pregnancy during Delta variant predominance - surveillance for emerging threats to pregnant people and infants: Pregnancy and infant outcomes during SARS-CoV-2 Delta variant predominance
Reeves EL , Neelam V , Carlson JM , Olsen EO , Fox CJ , Woodworth KR , Nestoridi E , Mobley E , Montero Castro S , Dzimira P , Sokale A , Sizemore L , Hall AJ , Ellington S , Cohn A , Gilboa SM , Tong VT . Am J Obstet Gynecol MFM 2023 6 (2) 101265 |
Development of COVID-19 vaccine policy - United States, 2020-2023
Oliver SE , Wallace M , Twentyman E , Moulia DL , Godfrey M , Link-Gelles R , Meyer S , Fleming-Dutra KE , Hall E , Wolicki J , MacNeil J , Bell BP , Lee GM , Daley MF , Cohn A , Wharton M . Vaccine 2023 |
Longitudinal population-level HIV epidemiologic and genomic surveillance highlights growing gender disparity of HIV transmission in Uganda
Monod M , Brizzi A , Galiwango RM , Ssekubugu R , Chen Y , Xi X , Kankaka EN , Ssempijja V , Abeler-Dörner L , Akullian A , Blenkinsop A , Bonsall D , Chang LW , Dan S , Fraser C , Golubchik T , Gray RH , Hall M , Jackson JC , Kigozi G , Laeyendecker O , Mills LA , Quinn TC , Reynolds SJ , Santelli J , Sewankambo NK , Spencer SEF , Ssekasanvu J , Thomson L , Wawer MJ , Serwadda D , Godfrey-Faussett P , Kagaayi J , Grabowski MK , Ratmann O . Nat Microbiol 2023 9 (1) 35-54 |
Genome-based prediction of cross-protective, HLA-DR-presented epitopes as putative vaccine antigens for multiple Bordetella species
Natrajan MS , Hall JM , Weigand MR , Peng Y , Williams MM , Momin M , Damron FH , Dubey P , Tondella ML , Pawloski LC . Microbiol Spectr 2023 e0352723 |
Early detection and surveillance of the SARS-CoV-2 variant BA.2.86 - Worldwide, July-October 2023
Lambrou AS , South E , Ballou ES , Paden CR , Fuller JA , Bart SM , Butryn DM , Novak RT , Browning SD , Kirby AE , Welsh RM , Cornforth DM , MacCannell DR , Friedman CR , Thornburg NJ , Hall AJ , Hughes LJ , Mahon BE , Daskalakis DC , Shah ND , Jackson BR , Kirking HL . MMWR Morb Mortal Wkly Rep 2023 72 (43) 1162-1167 |
Epidemiology and risk factors of norovirus infections among diarrhea patients admitted to tertiary care hospitals in Bangladesh
Satter SM , Abdullah Z , Fariha F , Karim Y , Rahman MM , Balachandran N , Ghosh PK , Hossain ME , Mirza SA , Hall AJ , Gastañaduy PA , Rahman M , Vinjé J , Parashar UD . J Infect Dis 2023 228 (7) 818-828 |
Genomic surveillance for SARS-CoV-2 variants: Circulation of Omicron lineages - United States, January 2022-May 2023
Ma KC , Shirk P , Lambrou AS , Hassell N , Zheng XY , Payne AB , Ali AR , Batra D , Caravas J , Chau R , Cook PW , Howard D , Kovacs NA , Lacek KA , Lee JS , MacCannell DR , Malapati L , Mathew S , Mittal N , Nagilla RR , Parikh R , Paul P , Rambo-Martin BL , Shepard SS , Sheth M , Wentworth DE , Winn A , Hall AJ , Silk BJ , Thornburg N , Kondor R , Scobie HM , Paden CR . MMWR Morb Mortal Wkly Rep 2023 72 (24) 651-656 |
Ebola Virus Disease Outbreak - Democratic Republic of the Congo, August 2018-November 2019.
Aruna A , Mbala P , Minikulu L , Mukadi D , Bulemfu D , Edidi F , Bulabula J , Tshapenda G , Nsio J , Kitenge R , Mbuyi G , Mwanzembe C , Kombe J , Lubula L , Shako JC , Mossoko M , Mulangu F , Mutombo A , Sana E , Tutu Y , Kabange L , Makengo J , Tshibinkufua F , Ahuka-Mundeke S , Muyembe JJ , Ebola Response CDC , Alarcon Walter , Bonwitt Jesse , Bugli Dante , Bustamante Nirma D , Choi Mary , Dahl Benjamin A , DeCock Kevin , Dismer Amber , Doshi Reena , Dubray Christine , Fitter David , Ghiselli Margherita , Hall Noemi , Hamida Amen Ben , McCollum Andrea M , Neatherlin John , Raghunathan Pratima L , Ravat Fatima , Reynolds Mary G , Rico Adriana , Smith Nailah , Soke Gnakub Norbert , Trudeau Aimee T , Victory Kerton R , Worrell Mary Claire . MMWR Morb Mortal Wkly Rep 2019 68 (50) 1162-1165 |
SARS-CoV-2 During Omicron Variant Predominance Among Infants Born to People With SARS-CoV-2.
Gosdin L , Chang D , Olsen EO , Lewis EL , Wingate H , Ojo KD , Shephard H , Sokale A , Mobley EL , Delgado-López C , Hall AJ , Gilboa SM , Tong VT , Woodworth KR . Pediatrics 2023 151 (5) |
Risk Factors for Multisystem Inflammatory Syndrome in Children: A Case-Control Investigation.
Zambrano LD , Wu MJ , Martin L , Malloch L , Chen S , Newhams MM , Son MB , Sanders C , Patterson K , Halasa N , Fitzgerald J , Leroue M , Hall M , Irby K , Rowan CM , Wellnitz K , Sahni L , Loftis L , Bradford TT , Staat M , Babbitt C , Carroll CL , Pannaraj P , Kong M , Schuster JE , Chou J , Patel MM , Randolph AG , Campbell AP , Hobbs CV . Pediatr Infect Dis J 2023 42 (6) e190-e196 |
Burkholderia thailandensis Isolated from the Environment, United States.
Hall CM , Stone NE , Martz M , Hutton SM , Santana-Propper E , Versluis L , Guidry K , Ortiz M , Busch JD , Maness T , Stewart J , Sidwa T , Gee JE , Elrod MG , Petras JK , Ty MC , Gulvik C , Weiner ZP , Salzer JS , Hoffmaster AR , Rivera-Garcia S , Keim P , Kieffer A , Sahl JW , Soltero F , Wagner DM . Emerg Infect Dis 2023 29 (3) 618-621 |
Results from the second WHO external quality assessment for the molecular detection of respiratory syncytial virus, 2019-2020.
Williams T , Jackson S , Barr I , Bi S , Bhiman J , Ellis J , von Gottberg A , Lindstrom S , Peret T , Rughooputh S , Viegas M , Hirve S , Zambon M , Zhang W , Dia N , Razanazatovo N , Al-Nabet Admh , Abubakar A , Tivane A , Barakat A , Naguib A , Aziz A , Vicari A , Moen A , Govindakarnavar A , Hall A , Darmaa B , Nathalie B , Herring B , Caetano BC , Whittaker B , Baumeister E , Nakouné E , Guthrie E , Inbanathan F , Nair H , Campbell H , Kadjo HA , Oumzil H , Heraud JM , Mott JA , Namulondo J , Leite J , Nahapetyan K , Al Ariqi L , Gazo MHI , Chadha M , Pisareva M , Venter M , Siqueira MM , Lumandas M , Niang M , Albuaini M , Salman M , Oberste S , Srikantiah P , Tang P , Couto P , Smith P , Coyle PV , Dussart P , Nguyen PN , Okada PA , Wijesinghe PR , Samuel R , Brown R , Pebody R , Fasce R , Jha R , Lindstrom S , Gerber S , Potdar V , Dong X , Deng YM . Influenza Other Respir Viruses 2023 17 (1) e13073 |
COVID-19 Scientific Publications From the Centers for Disease Control and Prevention, January 2020-January 2022.
Meites E , Knuth M , Hall K , Dawson P , Wang TW , Wright M , Yu W , Senesie S , Stephenson E , Imachukwu C , Sayi T , Gurbaxani B , Svendsen ER , Khoury MJ , Ellis B , King BA . Public Health Rep 2022 138 (2) 333549221134130 |
COVID-19-Associated Hospitalizations Among Vaccinated and Unvaccinated Adults 18 Years or Older in 13 US States, January 2021 to April 2022.
Havers FP , Pham H , Taylor CA , Whitaker M , Patel K , Anglin O , Kambhampati AK , Milucky J , Zell E , Moline HL , Chai SJ , Kirley PD , Alden NB , Armistead I , Yousey-Hindes K , Meek J , Openo KP , Anderson EJ , Reeg L , Kohrman A , Lynfield R , Como-Sabetti K , Davis EM , Cline C , Muse A , Barney G , Bushey S , Felsen CB , Billing LM , Shiltz E , Sutton M , Abdullah N , Talbot HK , Schaffner W , Hill M , George A , Hall AJ , Bialek SR , Murthy NC , Murthy BP , McMorrow M . JAMA Intern Med 2022 182 (10) 1071-1081 |
Transfusion-Transmitted Cache Valley Virus Infection in a Kidney Transplant Recipient with Meningoencephalitis.
Al-Heeti O , Wu EL , Ison MG , Saluja RK , Ramsey G , Matkovic E , Ha K , Hall S , Banach B , Wilson MR , Miller S , Chiu CY , McCabe M , Bari C , Zimler RA , Babiker H , Freeman D , Popovitch J , Annambhotla P , Lehman JA , Fitzpatrick K , Velez JO , Davis EH , Hughes HR , Panella A , Brault A , Erin Staples J , Gould CV , Tanna S . Clin Infect Dis 2022 76 (3) e1320-e1327 |
Vaccine Preventable Zoonotic Diseases: Challenges and Opportunities for Public Health Progress.
Carpenter A , Waltenburg MA , Hall A , Kile J , Killerby M , Knust B , Negron M , Nichols M , Wallace RM , Behravesh CB , McQuiston JH . Vaccines (Basel) 2022 10 (7) |
A Case Series of Children with Acute Hepatitis and Human Adenovirus Infection.
GutierrezSanchez LH , Shiau H , Baker JM , Saaybi S , Buchfellner M , Britt W , Sanchez V , Potter JL , Ingram LA , Kelly D , Lu X , Ayers-Millsap S , Willeford WG , Rassaei N , Bhatnagar J , Bullock H , Reagan-Steiner S , Martin A , Rogers ME , Banc-Husu AM , Harpavat S , Leung DH , Moulton EA , Lamson DM , StGeorge K , Hall AJ , Parashar U , MacNeil A , Tate JE , Kirking HL . N Engl J Med 2022 387 (7) 620-630 |
Public Health Response to Multistate Salmonella Typhimurium Outbreak Associated with Prepackaged Chicken Salad, United States, 2018.
Greening BJr , Whitham HK , Aldous WK , Hall N , Garvey A , Mandernach S , Kahn EB , Nonnenmacher P , Snow J , Meltzer MI , Hoffmann S . Emerg Infect Dis 2022 28 (6) 1254-1256 |
Diverse lineages of pathogenic Leptospira species are widespread in the environment in Puerto Rico, USA.
Stone NE , Hall CM , Ortiz M , Hutton S , Santana-Propper E , Celona KR , Williamson CHD , Bratsch N , Fernandes LGV , Busch JD , Pearson T , Rivera-Garcia S , Soltero F , Galloway R , Sahl JW , Nally JE , Wagner DM . PLoS Negl Trop Dis 2022 16 (5) e0009959 |
Association of Secretor Status and Recent Norovirus Infection With Gut Microbiome Diversity Metrics in a Veterans Affairs Population.
Johnson JA , Read TD , Petit RA3rd , Marconi VC , Meagley KL , Rodriguez-Barradas MC , Beenhouwer DO , Brown ST , Holodniy M , Lucero-Obusan CA , Schirmer P , Ingersoll JM , Kraft CS , Neill FH , Atmar RL , Kambhampati AK , Cates JE , Mirza SA , Hall AJ , Cardemil CV , Lopman BA . Open Forum Infect Dis 2022 9 (5) ofac125 |
Study protocol for the Innovative Support for Patients with SARS-COV-2 Infections Registry (INSPIRE): A longitudinal study of the medium and long-term sequelae of SARS-CoV-2 infection.
O'Laughlin KN , Thompson M , Hota B , Gottlieb M , Plumb ID , Chang AM , Wisk LE , Hall AJ , Wang RC , Spatz ES , Stephens KA , Huebinger RM , McDonald SA , Venkatesh A , Gentile N , Slovis BH , Hill M , Saydah S , Idris AH , Rodriguez R , Krumholz HM , Elmore JG , Weinstein RA , Nichol G . PLoS One 2022 17 (3) e0264260 |
Racial and Ethnic Disparities in Receipt of Medications for Treatment of COVID-19 - United States, March 2020-August 2021.
Wiltz JL , Feehan AK , Molinari NM , Ladva CN , Truman BI , Hall J , Block JP , Rasmussen SA , Denson JL , Trick WE , Weiner MG , Koumans E , Gundlapalli A , Carton TW , Boehmer TK . MMWR Morb Mortal Wkly Rep 2022 71 (3) 96-102 |
Vaccine Effectiveness Against Life-Threatening Influenza Illness in US Children.
Olson SM , Newhams MM , Halasa NB , Feldstein LR , Novak T , Weiss SL , Coates BM , Schuster JE , Schwarz AJ , Maddux AB , Hall MW , Nofziger RA , Flori HR , Gertz SJ , Kong M , Sanders RC , Irby K , Hume JR , Cullimore ML , Shein SL , Thomas NJ , Stewart LS , Barnes JR , Patel MM , Randolph AG . Clin Infect Dis 2022 75 (2) 230-238 |
Comparative Effectiveness and Antibody Responses to Moderna and Pfizer-BioNTech COVID-19 Vaccines among Hospitalized Veterans - Five Veterans Affairs Medical Centers, United States, February 1-September 30, 2021.
Bajema KL , Dahl RM , Evener SL , Prill MM , Rodriguez-Barradas MC , Marconi VC , Beenhouwer DO , Holodniy M , Lucero-Obusan C , Brown ST , Tremarelli M , Epperson M , Mills L , Park SH , Rivera-Dominguez G , Morones RG , Ahmadi-Izadi G , Deovic R , Mendoza C , Jeong C , Schrag SJ , Meites E , Hall AJ , Kobayashi M , McMorrow M , Verani JR , Thornburg NJ , Surie D . MMWR Morb Mortal Wkly Rep 2021 70 (49) 1700-1705 |
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