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CDC-Authored Genomics and Precision Health Publications Database|Home|Public Health Genomics and Precision Health Knowledge Base (PHGKB)

CDC-Authored Genomics and Precision Health Publications Database


Last data update: Mar 10, 2025. (Total: 6567 publications)
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Records 1-30 (of 33 Records)
Query Trace: Folster JP[original query]
Genetic diversity in Salmonella enterica in outbreaks of foodborne and zoonotic origin in the USA in 2006-2017
Trees E , Carleton HA , Folster JP , Gieraltowski L , Hise K , Leeper M , Nguyen TA , Poates A , Sabol A , Tagg KA , Tolar B , Vasser M , Webb HE , Wise M , Lindsey RL .
Microorganisms 2024 12 (8) type
Azithromycin-resistant mph(A)-positive Salmonella enterica serovar Typhi in the United States
Tagg KA , Kim JY , Henderson B , Birhane MG , Snyder C , Boutwell C , Lyo A , Li L , Weinstein E , Mercado Y , Peñil-Celis A , Mikoleit M , Folster JP , Watkins LKF .
J Glob Antimicrob Resist 2024 type
Mobile genetic elements define the non-random structure of the Salmonella enterica serovar Typhi pangenome
Peñil-Celis A , Tagg KA , Webb HE , Redondo-Salvo S , Francois Watkins L , Vielva L , Griffin C , Kim JY , Folster JP , Garcillan-Barcia MP , de la Cruz F .
mSystems 2024 e0036524
Corrigendum: Whole Genome Sequencing: Bridging One-Health Surveillance of Foodborne Diseases.
Gerner-Smidt P , Besser J , Concepción-Acevedo J , Folster JP , Huffman J , Joseph LA , Kucerova Z , Nichols MC , Schwensohn CA , Tolar B .
Front Public Health 2019 7 365
Increased Multidrug-Resistant Salmonella enterica I Serotype 4,[5],12:i:- Infections Associated with Pork, United States, 2009-2018.
Plumb ID , Brown AC , Stokes EK , Chen JC , Carleton H , Tolar B , Sundararaman P , Saupe A , Payne DC , Shah HJ , Folster JP , Friedman CR .
Emerg Infect Dis 2023 29 (2) 314-22 type
Genome Sequences of 18 Salmonella enterica Serotype Hadar Strains Collected from Patients in the United States.
Webb HE , Kim JY , Tagg KA , de la Cruz F , Peñil-Celis A , Tolar B , Ellison Z , Schwensohn C , Brandenburg J , Nichols M , Folster JP .
Microbiol Resour Announc 2022 11 (10) e0052222 type
Genomic Diversity, Antimicrobial Resistance, and Virulence Gene Profiles of Salmonella Serovar Kentucky Isolated from Humans, Food, and Animal Ceca Content Sources in the United States.
Tate H , Hsu CH , Chen JC , Han J , Foley SL , Folster JP , Francois Watkins LK , Reynolds J , Tillman GE , Nyirabahizi E , Zhao S .
Foodborne Pathog Dis 2022 19 (8) 509-521 type
Five Complete Salmonella enterica Serotype Reading Genomes Recovered from Patients in the United States.
Webb HE , Tagg KA , Kim JY , Miller EA , Johnson TJ , Peñil-Celis A , de la Cruz F , Folster JP .
Microbiol Resour Announc 2022 11 (7) e0038822 type
Fourteen mcr-1-Positive Salmonella enterica Isolates Recovered from Travelers Returning to the United States from the Dominican Republic.
Webb HE , Kim JY , Tagg KA , Kapsak CJ , Tobolowsky F , Birhane MG , Francois Watkins L , Folster JP .
Microbiol Resour Announc 2022 11 (5) e0011822 type
The Use of Whole-Genome Sequencing by the Federal Interagency Collaboration for Genomics for Food and Feed Safety in the United States.
Stevens EL , Carleton HA , Beal J , Tillman GE , Lindsey RL , Lauer AC , Pightling A , Jarvis KG , Ottesen A , Ramachandran P , Hintz L , Katz LS , Folster JP , Whichard JM , Trees E , Timme RE , McDermott P , Wolpert B , Bazaco M , Zhao S , Lindley S , Bruce BB , Griffin PM , Brown E , Allard M , Tallent S , Irvin K , Hoffmann M , Wise M , Tauxe R , Gerner-Smidt P , Simmons M , Kissler B , Defibaugh-Chavez S , Klimke W , Agarwala R , Lindsay J , Cook K , Austerman SR , Goldman D , McGarry S , Hale KR , Dessai U , Musser SM , Braden C .
J Food Prot 2022 85 (5) 755-772 type
Outbreak of Multidrug-Resistant Salmonella Heidelberg Infections Linked to Dairy Calf Exposure, United States, 2015-2018.
Nichols M , Gollarza L , Sockett D , Aulik N , Patton E , Francois Watkins LK , Gambino-Shirley KJ , Folster JP , Chen JC , Tagg KA , Stapleton GS , Trees E , Ellison Z , Lombard J , Morningstar-Shaw B , Schlater L , Elbadawi L , Klos R .
Foodborne Pathog Dis 2022 19 (3) 199-208
Comparison of Molecular Subtyping and Antimicrobial Resistance Detection Methods Used in a Large Multi-State Outbreak of Extensively Drug-Resistant Campylobacter jejuni Infections Linked to Pet Store Puppies.
Joseph LA , Francois Watkins LK , Chen J , Tagg KA , Bennett C , Caidi H , Folster JP , Laughlin ME , Koski L , Silver R , Stevenson L , Robertson S , Pruckler J , Nichols M , Pouseele H , Carleton HA , Basler C , Friedman CR , Geissler A , Hise KB , Aubert RD .
J Clin Microbiol 2020 58 (10)
Emergence of a Novel Salmonella enterica Serotype Reading Clonal Group Is Linked to Its Expansion in Commercial Turkey Production, Resulting in Unanticipated Human Illness in North America.
Miller EA , Elnekave E , Flores-Figueroa C , Johnson A , Kearney A , Munoz-Aguayo J , Tagg KA , Tschetter L , Weber BP , Nadon CA , Boxrud D , Singer RS , Folster JP , Johnson TJ .
mSphere 2020 5 (2) type
Identification and Characterization of Shigella with Decreased Susceptibility to Azithromycin in the United States, 2005 to 2014.
Campbell D , Bowen A , Bhatnagar A , McCullough A , Grass J , Chen J , Folster JP .
J Glob Antimicrob Resist 2019 21 417-419 type
Novel quinolone resistance determinant, qepA8, in Shigella flexneri isolated in the United States, 2016.
Webb HE , Tagg KA , Chen JC , Kim J , Lindsey R , Francois Watkins LK , Karp BE , Sugawara Y , Folster JP .
Antimicrob Agents Chemother 2019 63 (12) type
Validating the NCBI AMRFinder Tool and Resistance Gene Database Using Antimicrobial Resistance Genotype-Phenotype Correlations in a Collection of NARMS Isolates.
Feldgarden M , Brover V , Haft DH , Prasad AB , Slotta DJ , Tolstoy I , Tyson GH , Zhao S , Hsu CH , McDermott PF , Tadesse DA , Morales C , Simmons M , Tillman G , Wasilenko J , Folster JP , Klimke W .
Antimicrob Agents Chemother 2019 63 (11) type
Whole Genome Sequencing: Bridging One-Health Surveillance of Foodborne Diseases.
Gerner-Smidt P , Besser J , Concepcion-Acevedo J , Folster JP , Huffman J , Joseph LA , Kucerova Z , Nichols MC , Schwensohn CA , Tolar B .
Front Public Health 2019 7 172 type
Multidrug-Resistant Campylobacter jejuni Outbreak Linked to Puppy Exposure - United States, 2016-2018.
Montgomery MP , Robertson S , Koski L , Salehi E , Stevenson LM , Silver R , Sundararaman P , Singh A , Joseph LA , Weisner MB , Brandt E , Prarat M , Bokanyi R , Chen JC , Folster JP , Bennett CT , Francois Watkins LK , Aubert RD , Chu A , Jackson J , Blanton J , Ginn A , Ramadugu K , Stanek D , DeMent J , Cui J , Zhang Y , Basler C , Friedman CR , Geissler AL , Crowe SJ , Dowell N , Dixon S , Whitlock L , Williams I , Jhung MA , Nichols MC , de Fijter S , Laughlin ME .
MMWR Morb Mortal Wkly Rep 2018 67 (37) 1032-1035 type
Novel trimethoprim resistance gene dfrA34 identified in Salmonella Heidelberg in the USA.
Tagg KA , Francois Watkins L , Moore MD , Bennett C , Joung YJ , Chen JC , Folster JP .
J Antimicrob Chemother 2018 74 (1) 38-41 type
Comparative Analysis of Extended Spectrum Beta- Lactamase CTX-M-65-Producing Salmonella Infantis Isolates from Humans, Food Animals, and Retail Chickens in the United States.
Tate H , Folster JP , Hsu CH , Chen J , Hoffmann M , Li C , Morales C , Tyson GH , Mukerjee S , Brown AC , Green A , Wilson W , Dessai U , Abbott J , Joseph L , Haro J , Ayers S , McDermott PF , Zhao S .
Antimicrob Agents Chemother 2017 61 (7)
Characterization of Resistance Genes and Plasmids from Outbreaks and Illness Clusters Caused by Salmonella Resistant to Ceftriaxone in the United States, 2011-2012.
Folster JP , Grass JE , Bicknese A , Taylor J , Friedman CR , Whichard JM .
Microb Drug Resist 2016 23 (2) 188-193
Investigation of Escherichia coli Harboring the mcr-1 Resistance Gene - Connecticut, 2016.
Vasquez AM , Montero N , Laughlin M , Dancy E , Melmed R , Sosa L , Watkins LF , Folster JP , Strockbine N , Moulton-Meissner H , Ansari U , Cartter ML , Walters MS .
MMWR Morb Mortal Wkly Rep 2016 65 (36) 979-980
The use of whole genome sequencing for detecting antimicrobial resistance in nontyphoidal Salmonella.
McDermott PF , Tyson GH , Kabera C , Chen Y , Li C , Folster JP , Ayers SL , Lam C , Tate HP , Zhao S .
Antimicrob Agents Chemother 2016 60 (9) 5515-20
Whole Genome Sequencing Analysis Accurately Predicts Antimicrobial Resistance Phenotypes in Campylobacter.
Zhao S , Tyson GH , Chen Y , Li C , Mukherjee S , Young S , Lam C , Folster JP , Whichard JM , McDermott PF .
Appl Environ Microbiol 2015 82 (2) 459-66
Identification and characterization of multidrug-resistant Salmonella enterica serotype Albert isolates in the United States.
Folster JP , Campbell D , Grass J , Brown AC , Bicknese A , Tolar B , Joseph LA , Plumblee JR , Walker C , Fedorka-Cray PJ , Whichard JM .
Antimicrob Agents Chemother 2015 59 (5) 2774-9
Changing plasmid types responsible for extended-spectrum cephalosporin resistance in Escherichia coli O157:H7 in the USA, 1996-2009
Folster JP , Pecic G , Stroika S , Rickert R , Whichard JM .
J Glob Antimicrob Resist 2014 2 (2) 87-91
Evolutionary dynamics of Vibrio cholerae O1 following a single-source introduction to Haiti
Katz LS , Petkau A , Beaulaurier J , Tyler S , Antonova ES , Turnsek MA , Guo Y , Wang S , Paxinos EE , Orata F , Gladney LM , Stroika S , Folster JP , Rowe L , Freeman MM , Knox N , Frace M , Boncy J , Graham M , Hammer BK , Boucher Y , Bashir A , Hanage WP , Van Domselaar G , Tarr CL .
mBio 2013 4 (4)
Antimicrobial resistance genes in multidrug-resistant Salmonella enterica isolated from animals, retail meats, and humans in the United States and Canada.
Glenn LM , Lindsey RL , Folster JP , Pecic G , Boerlin P , Gilmour MW , Harbottle H , Zhao S , McDermott PF , Fedorka-Cray PJ , Frye JG .
Microb Drug Resist 2013 19 (3) 175-84
Genomic comparison of Escherichia coli O104:H4 isolates from 2009 and 2011 reveals plasmid, and prophage heterogeneity, including shiga toxin encoding phage stx2.
Ahmed SA , Awosika J , Baldwin C , Bishop-Lilly KA , Biswas B , Broomall S , Chain PS , Chertkov O , Chokoshvili O , Coyne S , Davenport K , Detter JC , Dorman W , Erkkila TH , Folster JP , Frey KG , George M , Gleasner C , Henry M , Hill KK , Hubbard K , Insalaco J , Johnson S , Kitzmiller A , Krepps M , Lo CC , Luu T , McNew LA , Minogue T , Munk CA , Osborne B , Patel M , Reitenga KG , Rosenzweig CN , Shea A , Shen X , Strockbine N , Tarr C , Teshima H , van Gieson E , Verratti K , Wolcott M , Xie G , Sozhamannan S , Gibbons HS .
PLoS One 2012 7 (11) e48228
Characterization of extended-spectrum cephalosporin-resistant Salmonella enterica serovar Heidelberg isolated from food animals, retail meat, and humans in the United States 2009
Folster JP , Pecic G , Singh A , Duval B , Rickert R , Ayers S , Abbott J , McGlinchey B , Bauer-Turpin J , Haro J , Hise K , Zhao S , Fedorka-Cray PJ , Whichard J , McDermott PF .
Foodborne Pathog Dis 2012 9 (7) 638-45
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