Last data update: Aug 15, 2025. (Total: 49733 publications since 2009)
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| Antimalarial drug resistance and population structure of Plasmodium falciparum in Mozambique using genomic surveillance at health facilities in 2021 and 2022
Boene S , Rovira-Vallbona E , da Silva C , Garcia-Ulloa M , Rafael B , Canana N , Aranda-Diaz A , Cistero P , Garcia-Fernandez C , Tembisse D , Ndimande N , Chidimatembue A , Matambisso G , Palmer B , Chico AR , Dimene M , Saifodine A , Inacio J , da Silva M , Plucinski M , Bonnington C , Wate F , de Carvalho E , Mathe G , Pujol A , Arregui-Gallego B , Comiche K , Nhama A , Nhamussua L , Aide P , Saute F , Enosse S , Greenhouse B , Candrinho B , Mayor A . Sci Rep 2025 15 (1) 29335
Monitoring the emergence and spread of drug-resistant parasites is essential for effective malaria control. Here, we describe the prevalence of genetic markers of Plasmodium falciparum antimalarial drug resistance and parasite population structure in Mozambique. Drug resistance loci and microhaplotypes were genotyped by multiplex targeted amplicon sequencing of 1146 P. falciparum samples collected in 2021 (n = 321) and 2022 (n = 825 rainy season, and n = 155 dry season). pfpm2 gene copy number (associated to piperaquine resistance) was assessed using real-time quantitative PCR. No pfk13 markers of partial artemisinin resistance nor pfpm2 duplications were observed. Prevalence of pfdhfr/pfdhps quintuple mutants associated with sulfadoxine-pyrimethamine (SP) resistance was high across all regions (> 92.5% in 2021 and > 87.8% in 2022), but pfdhps-A581G mutation was rare (1.6% in 2021 and 0.8% 2022). Both prevalence of mutations in pfdhps-436 (p < 0.001) and genetic complexity of infections increased from South to North. These results support the continued use of artemisinin-based combination therapies in Mozambique, call for a close monitoring of chemopreventive efficacy based on SP, and confirm the spatial genetic distinction in P. falciparum population observed across the country. |
| Strengthening Bilateral Cooperation Through the Japanese Ministry of Health, Labour, and Welfare Liaison to the US Administration for Strategic Preparedness and Response
Matsuzawa Y , Tewell A , Sugihara J , Okada T , Funasaka T , Nanamatsu Y , Yano Y , Kitahara K , Umeki K , Funaki T , Takahashi R , Hikida S , Kitayama A , Matsuoka R , Hogue KK , Bernabe KG , Garcia-Livelli S , Arthur B , Crabtree C , Vincent E , Saito T , Ohmagari N , Nealy M , Wakita T , Lamana J . Health Secur 2025 Beginning in 2016, the Japanese Ministry of Health, Labour and Welfare (MHLW) began stationing liaisons within the US Department of Health and Human Services (HHS) Administration for Strategic Preparedness and Response to strengthen cooperation on bilateral health security engagement and collaboration. Notable accomplishments include the establishment of the US-Japan Health Security Committee and collaborations between the US-Japan Disaster Medical Assistance Team on mass event responses, such as the repatriation of American citizens from the Diamond Princess in February 2020 and the COVID-19 response. Japan has also embedded liaisons at the US Centers for Disease Control and Prevention to advance collaboration on public health. In 2021, with COVID-19 highlighting the importance of collaboration on pandemic preparedness, MHLW established a liaison program with the US National Institute of Allergy and Infectious Diseases. These liaisons with HHS agencies have paid dividends to health security collaboration, particularly by enabling greater connections between technical experts in MHLW and HHS. |
| Multicenter Evaluation of Antibiotic Use and Antibiotic Stewardship Programs in Latin American Hospitals
Fabre V , Cosgrove SE , Hsu YJ , Patel TS , Lessa FC , Alvarado A , Aquiles B , Arauz AB , Barberis MF , Bangher MDC , Bernachea MP , Bernan ML , Canton A , Castañeda X , Colque AM , Contreras R , Cornistein W , Correa SM , Costilla Campero G , Chamorro Ayala MI , Espinola L , Esquivel C , Ezcurra C , Fernandez J , Ferrari S , Frassone N , Garcia Cruz C , Garzón MI , Gomez Quintero CH , Gonzalez JA , Guaymas L , Guerrero-Toapanta F , Lambert S , Laplume D , Lopez IL , Maldonado H , Mañez N , Maurizi DM , Melgar M , Mesplet F , Morales Pertuz C , Moreno Izquierdo C , Moya LG , Nuccetelli Y , Núñez G , Olmedo A , Palacio B , Pauluzzi A , de Paz Sierra M , Pellice F , Perez Alvear L , Raffo CL , Reino F , Vence Reyes L , Ricoy G , Rodriguez VE , Romero F , Romero JJ , Ruiz M , Russo ME , Sadino G , Sandoval N , Staffolani N , Torralvo MJ , Urueña AM , Videla H , Valle M , Vera Amate Perez S , Vergara-Samur H , Villamandos S , Villarreal O , Warley E , Reyes-Morales G , Quiros RE . Open Forum Infect Dis 2025 12 (7) ofaf364 BACKGROUND: There is limited knowledge on the extent of antimicrobial stewardship program (ASP) implementation in health care facilities (HCFs) in Latin America. METHODS: We performed an evaluation of ASPs in Latin American HCFs from March 2022 to February 2023 using a structured self-assessment survey associated with a scoring system that evaluated leadership support and accountability, resources, antibiotic stewardship actions, education, and antibiotic use (AU) monitoring and reporting. Additionally, we collected monthly AU data (antibiotic consumption and point prevalence surveys) and number of multidrug-resistant infections in medical-surgical intensive care units. Self-assessment scores were correlated with AU through multivariable regression models adjusting for bed size, country of HCF, and incidence of infections (when appropriate). RESULTS: Of the 39 HCFs recruited for the study, all completed the self-assessment, 36 performed the point prevalence survey, and 29 collected antibiotic consumption data. The overall median self-assessment score was 252.5 (IQR, 212.5-285) for a maximum possible score of 335. A high self-assessment score (top quartile) was associated with higher guideline-compliant AU (odds ratio [OR], 8.63; 95% CI, 3.03-24.6; P < .001), higher use of directed therapy (OR, 2.11; 95% CI, 1.41-3.1; P < .001), and less consumption of anti-methicillin-resistant Staphylococcus aureus agents (OR, -8.59; SE = 4.12; P = .037) after adjusting for bed size, country, and incidence of methicillin-resistant S aureus infections. CONCLUSIONS: Higher-level ASP implementation in Latin American HCFs correlated with better compliance with AU guidelines and decreased the use of vancomycin in the intensive care unit, supporting the need to improve resources for ASPs. |
| Incidence Rates of COVID-19-Associated Hospitalization and Risk Factors for Severe Disease Among American Indian and Alaska Native Persons in the Southwest USA and Alaska
Lutz CS , Sutcliffe CG , Keck JW , Hartman RM , Desnoyers C , Swango-Wilson A , Burrage AB , Campbell AP , Christensen L , Close RM , Damon S , Dobson J , Garcia S , Halasa N , Honie E , Little V , McMorrow ML , Parker D , Prill MM , Richards J , Va P , Veazie M , VanDeRiet D , Yazzie D , Singleton RJ , Hammitt LL . J Racial Ethn Health Disparities 2025 INTRODUCTION: COVID-19 causes significant morbidity in the USA, particularly among American Indian/Alaska Native (AI/AN) persons. Estimates of COVID-19 burden among AI/AN communities are needed to identify health outcome disparities and inform prevention strategies, but under-ascertainment of AI/AN status in national data may result in underestimation of COVID-19 disease burden. METHODS: Surveillance for acute respiratory illness was conducted among AI/AN persons at eight healthcare facilities in Arizona and Alaska to identify COVID-19-associated hospitalizations and outpatient visits. Weekly and annual incidence rates of COVID-19-associated hospitalizations per 100,000 persons were calculated overall and by site and age. Risk factors for COVID-19-associated hospitalizations (versus outpatient visits) were assessed. RESULTS: From January 2021 to December 2022, 1159 COVID-19-associated hospitalizations were identified. Incidence rates were 439.8 per 100,000 in 2021 and 332.6 per 100,000 in 2022 and highest among adults ≥ 65 years at all sites. Compared to national estimates from 2021 to 2022, incidence rates by time and age were similar among older adults, whereas incidence rates among AI/AN children were over twice as high. Among adults, older age, chronic lung disease, chronic kidney disease, and diabetes increased the risk of hospitalization; frequent mask use outside the home and COVID-19 vaccination were protective, particularly if vaccinated within the past year. Among children, younger age and heart conditions increased the risk of hospitalization. CONCLUSIONS: The findings demonstrate a substantial burden of COVID-19 in AI/AN persons and provide critically needed data regarding the risks for severe outcomes. AI/AN children experience a disproportionate burden of COVID-19 disease. |
| Trends in inpatient antibiotic use in Indonesia and the Philippines during the COVID-19 pandemic
Fazal AZ , McGovern OL , Mahon GW , Lessa FC , Gler MT , Garcia J , Festin MJ , Kuntaman K , Parwati I , Siregar C , Muere JCD , De Guzman Betito G , Montemayor M , De Leon A , Borillo E , Victor Llanes MR , Berba R , Rusli M , Qibtiyah M , Semedi BP , Sarassari R , Widyatmoko L , Andriyoko B , Md AKS , Turbawaty DK , Ranita ID , Ginting F , Joesoef RM , Krisna MA , Patel TS . Antimicrob Steward Healthc Epidemiol 2025 5 (1) e134 OBJECTIVE: Increased antibiotic use (AU) has been reported globally during the COVID-19 pandemic despite low rates of bacterial co-infection. We assessed changes in AU during the COVID-19 pandemic in Indonesia and the Philippines. METHODS: We evaluated hospital-wide AU over 36 months in six hospitals, 3 in Indonesia and 3 in the Philippines. Intravenous antibiotics commonly used for respiratory conditions were selected and grouped for analysis. AU rates were calculated as monthly defined daily dose per 1000 patient-days or patient discharges. Median AU rates were compared from the pre-pandemic (March 2018-February 2020) and pandemic periods (March 2020-February 2021) using quantile regression to assess for statistical significance. Changes in AU during the COVID-19 pandemic were analyzed using interrupted time series analysis. RESULTS: Significant increases were noted in the median AU rate from the pre-pandemic to pandemic period of all antibiotics combined in 3/6 hospitals (percentage change, Δ, 12.5%-63.6%) and anti-pseudomonal antibiotics in 3/6 hospitals (Δ 51.5%-161.5%). In the interrupted time series analysis, an immediate increase (range: 125.40-1762) in the use of all included antibiotics combined was observed in 3/6 hospitals at the onset of the COVID-19 pandemic. One of these 3 hospitals experienced a statistically significant sustained increase, while another experienced a decrease over time. CONCLUSIONS: We observed significant increases in facility-wide inpatient AU during the COVID-19 pandemic in our participating hospitals in Indonesia and the Philippines. These findings reinforce the importance of antibiotic stewardship practices to optimize AU, especially during infectious disease pandemics. |
| Expanding the Toolbox of Biomedical HIV Prevention Options Through Innovative Design
García-Lerma JG . Pharmaceutics 2025 17 (6) Research on biomedical HIV prevention has shown that no single product can meet the needs and preferences of all individuals [...]. |
| Annual (2024) taxonomic update of RNA-directed RNA polymerase-encoding negative-sense RNA viruses (realm Riboviria: kingdom Orthornavirae: phylum Negarnaviricota)
Kuhn JH , Adkins S , Alkhovsky Альховский Сергей Владимирович SV , An 安雯霞 W , Avšič-Županc T , Ayllón MA , Bačnik K , Bahl J , Balkema-Buschmann A , Ballinger MJ , Beer M , Bejerman N , Bergeron É , Biedenkopf N , Blair CD , Blasdell KR , Bradfute SB , Briese T , Brown K , Brown PA , Buchholz UJ , Buchmeier MJ , Bukreyev A , Burt F , Calisher CH , Calvelage S , Cao 曹孟籍 M , Casas I , Chabi-Jesus C , Chandran K , Charrel RN , Crane A , Cuypers LN , Bó ED , de la Torre JC , de Souza WM , de Swart RL , Debat HJ , Dheilly NM , Di Paola N , Di Serio F , Dietzgen RG , Digiaro M , Drexler JF , Duprex WP , Dürrwald R , Easton AJ , Elbeaino T , Ergünay K , Eshak MIY , Feng 冯国忠 G , Firth AE , Fooks AR , Formenty PBH , Freitas-Astúa J , Freuling CM , Gadd T , Gago-Zachert S , García ML , García-Sastre A , Garrison AR , Goldberg TL , Gonzalez JJ , Goüy de Bellocq J , Griffiths A , Groschup MH , Gryseels S , Gutiérrez-Aguirre I , Günther S , Hammond J , Hepojoki J , Horie 堀江真行 M , Hume AJ , Hyndman TH , Höper D , Jiāng 姜道宏 D , Junglen S , Klempa B , Klingström J , Kondō 近藤秀樹 H , Koonin EV , Krupovic M , Kubota 久保田健嗣 K , Kurath G , Kutnjak D , Laenen L , Lambert AJ , Lee B , Li 李呈宇 C , Lǐ 李建荣 J , Li 李俊敏 JM , Lukashevich IS , Maes P , Marklewitz M , Marshall SH , Marzano SL , McCauley JW , Mehle N , Mirazimi A , Morikawa 守川俊幸 T , Mühlberger E , Müller T , Naidu R , Natsuaki 夏秋知英 T , Navarro B , Navarro JA , Neriya 煉谷裕太朗 Y , Netesov Нетёсов Сергей Викторович SV , Nicoloso VM , Neumann G , Nokireki T , Nowotny N , Nunes MRT , Ochoa-Corona FM , Palacios G , Pallás V , Papa Άννα Παπά A , Paraskevopoulou Σοφία Παρασκευοπούλου S , Parrish CR , Pauvolid-Corrêa A , Pecman A , Pérez DR , Pfaff F , Plemper RK , Postler TS , Radoshitzky SR , Ramos-González PL , Ravnikar M , Resende RO , Reuter G , Reyes CA , Rivarez MPS , Romanowski V , Rubbenstroth D , Rubino L , Runstadler JA , Ruiz-Padilla A , Sabanadzovic S , Salvato MS , Sasaya 笹谷孝英 IT , Schmaljohn CS , Schmidt-Posthaus H , Schwemmle M , Seljak G , Seuberlich T , Shi 施莽 M , Shimomoto 下元祥史 Y , Simmonds P , Sironi M , Smith DB , Smither S , Song 송진원 JW , Spann KM , Spengler JR , Stenglein MD , Takada 高田礼人 A , Takemura C , Tammiranta N , Tesh RB , Thornburg NJ , Tischler ND , Tomitaka 冨髙保弘 Y , Tomonaga 朝長啓造 K , Tordo N , Turina M , Tzanetakis Ιωάννης Ε Τζανετάκης IE , Vaira AM , van den Hoogen B , Vanmechelen B , Vasilakis Νίκος Βασιλάκης N , Verbeek M , von Bargen S , Vučurović A , Wada 和田治郎 J , Wahl V , Walker PJ , Wang 王飞 F , Whitfield AE , Williams JV , Wolf YI , Yanagisawa 栁澤広宣 H , Yang 杨彩霞 C , Ye 叶恭银 G , Yu 于美春 MC , Zerbini FM , Zhang S , Økland AL , Hughes HR . J Gen Virol 2025 106 (6)
In April 2024, following the annual International Committee on Taxonomy of Viruses (ICTV) ratification vote on newly proposed taxa, the phylum Negarnaviricota was expanded by 1 new order, 1 new family, 6 new subfamilies, 34 new genera and 270 new species. One class, two orders and six species were renamed. Seven families and 12 genera were moved; ten species were renamed and moved; and nine species were abolished. This article presents the updated taxonomy of Negarnaviricota as currently accepted by the ICTV, providing an essential annual update on the classification of members of this phylum that deepen understandings of their evolution, and supports critical public health measures for virus identification and tracking. |
| Interlaboratory study to assess precision and reproducibility of the meningococcal antigen surface expression (MEASURE) assay to quantify factor H binding protein expression at the surface of meningococcal serogroup B strains
Loschko J , Liberator P , Findlow J , Yip J , Tan C , Garcia K , Murillo M , Gorantla Y , Moss KM , Maniatis P , Clark SA , Borrow R . Diagn Microbiol Infect Dis 2025 113 (2) 116920
BACKGROUND: The serum bactericidal antibody using human complement (hSBA) assay, the accepted surrogate measure of meningococcal vaccine efficacy, is limited by human sera and complement requirements. Pfizer developed and validated the flow-cytometry-based Meningococcal Antigen Surface Expression (MEASURE) assay to quantify surface-expressed factor H binding protein (fHbp) levels on intact meningococci. Surface expression of fHbp is correlated with hSBA assay killing by MenB-fHbp (Trumenba(Ⓡ))-induced antibody, meaning the MEASURE assay can be used to predict meningococcal serogroup B (MenB) strain susceptibility to antibodies elicited by MenB-fHbp. This study aimed to evaluate interlaboratory precision and reproducibility of the MEASURE assay. METHODS: The MEASURE assay was transferred to UK Health Security Agency (UKHSA) and US Centers for Disease Control and Prevention (CDC) laboratories. MEASURE assay results from 42 MenB strains encoding sequence-diverse fHbp variants that express fHbp at different levels were compared between the UKHSA, CDC, and Pfizer laboratories. Intermediate precision within each laboratory was determined. RESULTS: Pairwise comparisons of fHbp expression levels for all 42 MenB test strains showed >97 % agreement across the 3 laboratories when strains were grouped above or below a mean fluorescence intensity level of 1000, the threshold previously established as indicative of susceptibility to MenB-fHbp-induced antibodies in the hSBA assay. Each laboratory met assay precision criteria of ≤30 % total relative standard deviation. CONCLUSIONS: Quantification of fHbp surface expression using the MEASURE assay is robust and reproducible across different laboratories. Previously determined cutoffs corresponding to predicted susceptibility to vaccine-induced antibodies can be applied to MEASURE data generated across laboratories. |
| Lifeline: a musical about antimicrobial resistance that raises awareness and inspires action
Garcia-Iglesias J , Relph K , Hiley R , Conway J , Richardson G , Stahl M , Oxlade C , Murphy-Hoefer R , Jones C , Perry M . Nat Med 2025
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| Using an Electronic Self-Administered Survey Among First Responders to Evaluate the Potential Human Health Effects of Hazardous Substances Released as a Result of a Train Derailment Incident-East Palestine, Ohio, USA, February-March 2023
Crisp CA , Parasram VD , Shi DS , Omari A , Madera-Garcia V , Faherty EAG , Dulcey M , Burr K , Gichuhi B , Goldsworthy LA , Dowell CH , Chiu SK , Dickerson K , Dewart CM , Watkins SM , Harduar-Morano L , Babich R , Shugart J , Orr MF . Disaster Med Public Health Prep 2025 19 e121 To understand the potential human health effects of exposure to hazardous substances among first responders from the East Palestine train derailment, an electronic self-administered Assessment of Chemical Exposures (ACE) survey was created and available to first responders between February-March 2023. Among the 339 completed responder surveys analyzed, most reported working at least 1 day during the incident between February 3-8, 2023. Most (79%) reported inhaling, touching, or swallowing potentially harmful substances and did not report using a face mask or respirator while working (75%). Nearly half reported at least 1 new or worsening physical symptom after incident response. These findings support several recommendations to mitigate exposure to hazardous substances among first responders during future incidents, including using a hierarchy of controls framework to reduce exposure to hazards, timely communication of possible hazardous substances involved in the event, and using the Emergency Responder Health Monitoring Surveillance (ERHMS) framework. |
| Effectiveness of School Fluoride Delivery Programs: A Community Guide Systematic Review
Griffin SO , Lin M , Scherrer CR , Naavaal S , Hopkins DP , Jones AA , Alexander T , Black VA , Clark E , Cofano LK , Garcia RI , Goddard A , Grover J , Kansagra SM , Kottke TE , Lense EC , Zokaie T . Am J Prev Med 2025 INTRODUCTION: Although preventable, dental caries remains highly prevalent. Many children do not receive preventive dental services routinely in clinical settings. This review examined the effectiveness of school (preschool through high school) fluoride varnish delivery programs (SFVDP) in preventing caries. METHODS: Community Guide systematic review methods were followed. In 2024, databases were searched for studies published through December 2023 on SFVDP effectiveness in increasing fluoride varnish (FV) receipt and decreasing caries. Included studies had to be written in English, published in peer-reviewed journals, and conducted in upper-middle or high-income countries. Data synthesis conducted in 2024 used median RR and interquartile interval (IQI) to summarize findings across studies. RESULTS: Of 31 included studies with 60,780 students, 25 were randomized controlled trials-20 with good quality of execution. Most studies were conducted in low socioeconomic status (SES) areas among students at elevated caries risk. SFVDP reduced caries initiation by 32% (IQI: 21%, 37%) in permanent teeth (19 studies, 25,826 students) and by 25% (IQI: 4%, 37%) in primary teeth (12 studies, 4,304 students). Stratified assessments indicated findings were largely applicable to different settings, populations, and intervention characteristics. Two studies found SFVDP significantly increased the number of annual FV applications and two found that SFVDP effectiveness was inversely related to SES. DISCUSSION: About 30% of states report having no SFVDPs. Possible barriers to implementation include that Medicaid in some states only reimburses dental and medical professionals and does not reimburse non-dental providers for FV delivered to children older than 6 years. |
| Impacts of ground-based ULV pyrethroid sprays on abundance and age structure of the Zika vector, Aedes aegypti (Diptera: Culicidae), in urban Arizona
Walker K , Gouge D , Williamson D , Arnbrister J , Joy T , Will J , Townsend J , Li S , Nair S , Brophy M , Madera Garcia V , Ernst K , Carrière Y , Riehle M . J Med Entomol 2025 Aedes aegypti (L.), the primary mosquito vector of arboviruses such as dengue and Zika, has a global distribution that includes the southern United States. Control of this peridomestic mosquito is challenging. Ultra-low volume (ULV) pyrethroid sprays are commonly used against adult mosquitoes to break transmission during a disease outbreak, although efficacy data are limited. This study examined the impacts of ULV sprays on Ae. aegypti vectorial capacity as measured by vector abundance and age structure in two cities in Maricopa County, AZ with robust Ae. aegypti populations and a well-developed vector management program. We assessed impacts of routine ULV applications conducted by Maricopa Vector Control Division during the summer rainy seasons of 2017 to 2019 to determine whether existing practices mainly targeting Culex spp. also suppressed Ae. aegypti. The insecticide formulations applied for Culex spp. control (Duet and Permanone 30-30) did not affect Ae. aegypti abundance, but Duet applications slightly reduced female mosquito age. Deltagard, the insecticide product used specifically against Ae. aegypti, was only applied three times in 2018 over small areas, so efficacy assessment was difficult. Deltagard was associated with a small decline in Ae. aegypti abundance. CDC bottle bioassays of Ae. aegypti collected in the study area showed resistance to permethrin and deltamethrin. Overall, the lack of significant mosquito population suppression or age structure changes after insecticide applications suggest that current tools used by Maricopa Vector Control Division are unlikely to effectively control Ae. aegypti populations in the event of a disease outbreak. |
| A comparative analysis of universal and sentinel surveillance data for coronavirus disease 2019: Insights from Argentina, Chile, and Mexico (2020-2022)
Redondo-Bravo L , Zureick K , Voto C , Molina Avendaño X , Flores-Cisneros L , Fowlkes A , Iummato LE , Giovacchini C , Olivares Barraza MF , Rodriguez Ferrari P , Gutiérrez-Vargas R , Zaragoza-Jiménez CA , García-Rodríguez G , López-Gatell H , Rodríguez Á , Couto P , Rondy M , Vicari AS . J Infect Dis 2025 231 S114-s122 BACKGROUND: In 2020, countries implemented universal surveillance to detect and monitor severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) cases. Although crucial for early monitoring efforts, universal surveillance is resource intensive. To understand the implications of transitioning from universal to sentinel surveillance for monitoring SARS-CoV-2 transmissibility, morbidity and mortality, and disease seriousness, we compared measures of SARS-CoV-2 reported from both surveillance strategies in Argentina, Chile, and Mexico. METHODS: We obtained weekly case counts in Argentina, Chile, and Mexico, in periods when both universal and sentinel surveillance were ongoing. To assess the countries' surveillance strategies, we measured the proportion of total sites that were included in sentinel surveillance. We compared 8 measures of SARS-CoV-2 transmissibility, morbidity and mortality, and disease seriousness between sentinel and universal surveillance and assessed the correlation between the 2 strategies for the 8 measures. Pearson and Spearman correlation was classified as very strong (rs = 0.8-1.0), strong (rs = 0.60-0.79), moderate (rs = 0.50-0.59), or poor (r < 0.50). RESULTS: The proportion of total sites included in sentinel surveillance was 5.8% for Argentina, 1.1% for Chile, and 7.6% for Mexico. A total of 21 measures were calculated (8 for Mexico, 8 for Chile, and 5 for Argentina). Of these, 17 showed consistency between the 2 surveillance strategies, with strong or very strong correlations (r = 0.66-0.99): all 8 measures for Mexico, 6 of 8 measures for Chile, and 3 of 5 measures for Argentina. Each country had ≥1 measure reflecting transmissibility and ≥1 reflecting morbidity and mortality for which the correlation was strong or very strong. Chile and Mexico also had ≥1 measure of disease seriousness for which the correlation was strong. CONCLUSIONS: Our findings suggest that the integration of SARS-CoV-2 into national sentinel surveillance can yield information comparable to that provided by nationwide universal surveillance for measures related to SARS-CoV-2 transmissibility, morbidity and mortality, and seriousness of disease. |
| Circulating neutralizing antibodies and SARS-CoV-2 variant replication following postvaccination infections
Garcia-Knight MA , Kelly JD , Lu S , Tassetto M , Goldberg SA , Zhang A , Pineda-Ramirez J , Anglin K , Davidson MC , Chen JY , Fortes-Cobby M , Park S , Martinez A , So M , Donovan A , Viswanathan B , Richardson ET , McIlwain DR , Gaudilliere B , Rutishauser RL , Chenna A , Petropoulos C , Wrin T , Deeks SG , Abedi GR , Saydah S , Martin JN , Briggs Hagen M , Midgley CM , Peluso MJ , Andino R . JCI Insight 2025 10 (5)
The effect of preexisting neutralizing antibodies (NAb) on SARS-CoV-2 shedding in postvaccination infection (PVI) is not well understood. We characterized viral shedding longitudinally in nasal specimens in relation to baseline (pre/periinfection) serum NAb titers in 125 participants infected with SARS-CoV-2 variants. Among 68 vaccinated participants, we quantified the effect of baseline NAb titers on maximum viral RNA titers and infectivity duration. Baseline NAbs were higher and targeted a broader range of variants in participants with monovalent ancestral booster vaccinations compared with those with a primary vaccine series. In Delta infections, baseline NAb titers targeting Delta or Wuhan-Hu-1 correlated negatively with maximum viral RNA. Per log10 increase in Delta-targeting baseline NAb IC50, maximum viral load was reduced -2.43 (95% CI: -3.76, -1.11) log10 nucleocapsid copies, and infectious viral shedding was reduced -2.79 (95% CI: -4.99, -0.60) days. Conversely, in Omicron infections (BA.1, BA.2, BA.4, or BA.5), baseline NAb titers against Omicron lineages or Wuhan-Hu-1 did not predict viral outcomes. Our results provide robust estimates of the effect of baseline NAbs on the magnitude and duration of nasal viral replication after PVI (albeit with an unclear effect on transmission) and show how immune escape variants efficiently evade these modulating effects. |
| Non-fatal opioid overdose and unmet need for medications for opioid use disorder among recently incarcerated people who inject drugs
Madera-Garcia V , Broz D , Baugher AR , Hershow RB , Dasgupta S , Asher A , Hefferon R , Worthington N , Cha S . Drug Alcohol Depend 2025 270 112634 BACKGROUND: Medications for opioid use disorder (MOUD) are key to preventing opioid overdose. Despite the high risk of opioid overdose among recently incarcerated people who use drugs, missed opportunities for engagement in MOUD treatment persist in this population. We examined the association between unmet need for MOUD and non-fatal opioid overdose among recently incarcerated people who inject drugs (PWID) and assessed prevalence of non-fatal opioid overdose by selected characteristics. METHODS: We analyzed 2022 data from the National HIV Behavioral Surveillance (NHBS) system among PWID from 20 large U.S. cities. Adjusted prevalence ratios (aPR) and 95 % confidence intervals (95 % CI) were calculated to examine the association between unmet need for MOUD and non-fatal opioid overdose. RESULTS: Among 1648 recently incarcerated PWID, 28 % reported an unmet need for MOUD and 39 % reported a non-fatal opioid-involved overdose in the past 12 months. Experiencing homelessness in the last 12 months (aPR=1.43, 95 % CI=1.27-1.61) and living in the Midwest region of the U.S. (aPR=1.18, 95 % CI=1.01-1.38) were significantly associated with reporting a non-fatal opioid overdose. Recently incarcerated PWID with an unmet need for MOUD were 1.4 times as likely to report a non-fatal opioid overdose in the past 12 months (50 %; aPR=1.42, 95 % CI=1.29-1.56) compared with recently incarcerated PWID without an unmet need for MOUD (35 %). CONCLUSIONS: Unmet need for MOUD was significantly associated with non-fatal opioid overdose among PWID who were incarcerated in the past 12 months, suggesting the need to investigate specific strategies to improve to MOUD treatment among recently incarcerated PWID. |
| Understanding perceived barriers to and responsibility for implementing recommended hygiene activities in US schools K-12: A needs assessment among caregivers and educators
Carry MG , Soelaeman RH , Aluko-Estrella SK , Garcia-Williams AG , West LK , Haston JC , Besrat BN , Aponte J , Jones SL , Rutt CD . Health Behav Policy Rev 2024 11 (6) 1770-1782 Objective: Schools’ ability to implement recommended hygiene-related activities is critical in preventing the spread of gastrointestinal and respiratory illness. We conducted this study to improve understanding of perceived barriers to, and responsibility for implementing recommended activities related to hand hygiene, cleaning, and disinfection. Methods: We recruited a convenience sample of adults affiliated with the National Parent Teacher Association during July-August 2020. Questions focused on barriers to implementing recommended hygiene-related, cleaning, and disinfection activities. Results: Overall, 1173 participants completed the survey. Among caregivers, the main barriers to conducting hand hygiene were educators’ ability to monitor students (72%), lack of time (66%), and limited funding for hygiene supplies (65%). Among educators, the main barriers to conducting hand hygiene were access to needed supplies (75%), ability to monitor students (75%), and lack of time (72%). The top barriers reported by both groups relating to cleaning and disinfection activities were similar, with both groups reporting limited staff capacity (61% vs 75%), lack of time/scheduling difficulties (64% vs 75%), and lack of funds to purchase supplies (64% vs 70%). Conclusions: Our results clarify stakeholder concerns around implementation and main barriers. To implement recommended activities, schools need support (funding, staff, and supplies) and guidance for hygiene-related activities. © 2024, Paris Scholar Publishing. All rights reserved. |
| Global guideline for the diagnosis and management of candidiasis: an initiative of the ECMM in cooperation with ISHAM and ASM
Cornely OA , Sprute R , Bassetti M , Chen SC , Groll AH , Kurzai O , Lass-Flörl C , Ostrosky-Zeichner L , Rautemaa-Richardson R , Revathi G , Santolaya ME , White PL , Alastruey-Izquierdo A , Arendrup MC , Baddley J , Barac A , Ben-Ami R , Brink AJ , Grothe JH , Guinea J , Hagen F , Hochhegger B , Hoenigl M , Husain S , Jabeen K , Jensen HE , Kanj SS , Koehler P , Lehrnbecher T , Lewis RE , Meis JF , Nguyen MH , Pana ZD , Rath PM , Reinhold I , Seidel D , Takazono T , Vinh DC , Zhang SX , Afeltra J , Al-Hatmi AMS , Arastehfar A , Arikan-Akdagli S , Bongomin F , Carlesse F , Chayakulkeeree M , Chai LYA , Chamani-Tabriz L , Chiller T , Chowdhary A , Clancy CJ , Colombo AL , Cortegiani A , Corzo Leon DE , Drgona L , Dudakova A , Farooqi J , Gago S , Ilkit M , Jenks JD , Klimko N , Krause R , Kumar A , Lagrou K , Lionakis MS , Lmimouni BE , Mansour MK , Meletiadis J , Mellinghoff SC , Mer M , Mikulska M , Montravers P , Neoh CF , Ozenci V , Pagano L , Pappas P , Patterson TF , Puerta-Alcalde P , Rahimli L , Rahn S , Roilides E , Rotstein C , Ruegamer T , Sabino R , Salmanton-García J , Schwartz IS , Segal E , Sidharthan N , Singhal T , Sinko J , Soman R , Spec A , Steinmann J , Stemler J , Taj-Aldeen SJ , Talento AF , Thompson GR 3rd , Toebben C , Villanueva-Lozano H , Wahyuningsih R , Weinbergerová B , Wiederhold N , Willinger B , Woo PCY , Zhu LP . Lancet Infect Dis 2025
Candida species are the predominant cause of fungal infections in patients treated in hospital, contributing substantially to morbidity and mortality. Candidaemia and other forms of invasive candidiasis primarily affect patients who are immunocompromised or critically ill. In contrast, mucocutaneous forms of candidiasis, such as oral thrush and vulvovaginal candidiasis, can occur in otherwise healthy individuals. Although mucocutaneous candidiasis is generally not life-threatening, it can cause considerable discomfort, recurrent infections, and complications, particularly in patients with underlying conditions such as diabetes or in those taking immunosuppressive therapies. The rise of difficult-to-treat Candida infections is driven by new host factors and antifungal resistance. Pathogens, such as Candida auris (Candidozyma auris) and fluconazole-resistant Candida parapsilosis, pose serious global health risks. Recent taxonomic revisions have reclassified several Candida spp, potentially causing confusion in clinical practice. Current management guidelines are limited in scope, with poor coverage of emerging pathogens and new treatment options. In this Review, we provide updated recommendations for managing Candida infections, with detailed evidence summaries available in the appendix. |
| Global impact of 10- and 13-valent pneumococcal conjugate vaccines on pneumococcal meningitis in all ages: The PSERENADE project
Yang Y , Knoll MD , Herbert C , Bennett JC , Feikin DR , Garcia Quesada M , Hetrich MK , Zeger SL , Kagucia EW , Xiao M , Cohen AL , van der Linden M , du Plessis M , Yildirim I , Winje BA , Varon E , Valenzuela MT , Valentiner-Branth P , Steens A , Scott JA , Savrasova L , Sanz JC , Khan AS , Oishi K , Nzoyikorera N , Nuorti JP , Mereckiene J , McMahon K , McGeer A , Mackenzie GA , MacDonald L , Ladhani SN , Kristinsson KG , Kleynhans J , Kellner JD , Jayasinghe S , Ho PL , Hilty M , Hammitt LL , Guevara M , Gilkison C , Gierke R , Desmet S , De Wals P , Dagan R , Colzani E , Ciruela P , Chuluunbat U , Chan G , Camilli R , Bruce MG , Brandileone MC , Ampofo K , O'Brien KL , Hayford K . J Infect 2025 90 (3) 106426
BACKGROUND: Pneumococcal conjugate vaccines (PCVs) introduced in childhood national immunization programs lowered vaccine-type invasive pneumococcal disease (IPD), but replacement with non-vaccine-types persisted throughout the PCV10/13 follow-up period. We assessed PCV10/13 impact on pneumococcal meningitis incidence globally. METHODS: The number of cases with serotyped pneumococci detected in cerebrospinal fluid and population denominators were obtained from surveillance sites globally. Site-specific meningitis incidence rate ratios (IRRs) comparing pre-PCV incidence to each year post-PCV10/13 were estimated by age (<5, 5-17 and ≥18 years) using Bayesian multi-level mixed effects Poisson regression, accounting for pre-PCV trends. All-site weighted average IRRs were estimated using linear mixed-effects regression stratified by age, product (PCV10 or PCV13) and prior PCV7 impact (none, moderate, or substantial). Changes in pneumococcal meningitis incidence were estimated overall and for product-specific vaccine-types and non-PCV13-types. RESULTS: Analyses included 10,168 cases <5 y from PCV13 sites and 2849 from PCV10 sites, 3711 and 1549 for 5-17 y and 29,187 and 5653 for ≥18 y from 42 surveillance sites (30 PCV13, 12 PCV10, 2 PCV10/13) in 30 countries, primarily high-income (84%). Six years after PCV10/PCV13 introduction, pneumococcal meningitis declined 48-74% across products and PCV7 impact strata for children <5 y, 35-62% for 5-17 y and 0-36% for ≥18 y. Impact against PCV10-types at PCV10 sites, and PCV13-types at PCV13 sites was high for all age groups (<5 y: 96-100%; 5-17 y: 77-85%; ≥18 y: 73-85%). After switching from PCV7 to PCV10/13, increases in non-PCV13-types were generally low to none for all age groups. CONCLUSION: Pneumococcal meningitis declined in all age groups following PCV10/PCV13 introduction. Plateaus in non-PCV13-type meningitis suggest less replacement than for all IPD. Data from meningitis belt and high-burden settings were limited. |
| Prevalence, patterns, and predictors of SARS-CoV-2 RNA and culturable virus in tears of a case-ascertained household cohort. (Special Issue: COVID-19.)
So Matthew , Goldberg Sarah A , Lu Scott , Garcia-Knight Miguel , Davidson Michelle C , Tassetto Michel , Murray Victoria Wong , Anglin Khamal , Pineda-Ramirez Jesus , Chen Jessica Y , Rugart Paulina R , Richardson Eugene T , Briggs-Hagen Melissa , Midgley Claire M , Andino Raul , Seitzman Gerami D , Gonzales John , Peluso Michael J , Martin Jeffrey N , Kelly John Daniel . Am J Ophthalmol 2024 265 48-53
Purpose: To investigate the prevalence, patterns, and predictors of SARS-CoV-2 RNA and culturable virus in tears of a case-ascertained household cohort. Design: Prospective, longitudinal case-ascertained household cohort identified through convenience sampling. MethodsThis analysis was restricted to individuals who were non-hospitalized, symptomatic, and tested positive for SARS-CoV-2 by nasal RT-PCR. Tears and anterior nasal biospecimens were serially collected throughout the acute period. Tears specimens were collected by the study staff using Schirmer test strips, and nasal specimens were self-collected. For both, SARS-CoV-2 RNA was quantified using qRT-PCR, and culturable virus was detected using presence of cytopathic effect (CPE) in tissue culture; positive CPE was confirmed by a qRT-PCR step. A series of cross-sectional unadjusted analyses were performed investigating the relationship between different sociodemographic determinants and biological factors associated with tears RNA positivity. |
| Characterization of extended-spectrum beta-lactamase-producing Enterobacteriaceae from recreational water in Athens, GA, using an undergraduate laboratory module
Rodriguez-Garcia C , Wall H , Ottesen E , Grainy J . J Microbiol Biol Educ 2025 e0005624
We present a laboratory module that uses isolation of antibiotic-resistant bacteria from locally collected stream water samples to introduce undergraduate students to basic microbiological culture-based and molecular techniques. This module also educates them on the global public health threat of antibiotic-resistant organisms. Through eight laboratory sessions, students are involved in quality testing of water sources from their neighborhoods, followed by isolation of extended-spectrum beta-lactamase-producing Enterobacteriaceae. By the end of the module, students should be able to isolate Enterobacteriaceae from the environment using selective and differential media, identify isolates using biochemical tests, characterize antibiotic resistance phenotypes using Kirby Bauer and MIC tests, and evaluate the presence of select beta-lactamase genes of interest using PCR. To complement laboratory sessions, students participated in a weekly flipped classroom session with collaborative peer discussions and activities to reinforce concepts applied in the laboratory. Learning outcomes were measured over four semesters with concept checks, in-lecture activities, exams, and laboratory reports. We hypothesized that more than 50% of the student population would achieve each learning objective through the implementation of this authentic research laboratory module. Here, we highlight specific questions used to assess learning objective comprehension and demonstrate that each learning objective was achieved by 65%-100% of the student population. We present a ready-to-adapt module with flexible resources that can be implemented in courses across disciplines in biology, microbiology, environmental sciences, and public health. |
| Data impacts of changes in U.S. Census Bureau procedures for race and ethnicity data
Arias E , Liebler CA , Garcia MA , Sáenz R . SSM Popul Health 2025 29 Beginning with the 2020 decennial census and the 2020 American Community Survey (ACS), the U.S. Census Bureau implemented changes in question design, data processing, and coding procedures for the race and ethnicity data they collect that appear to have resulted in major data discontinuity. However, the Census Bureau has not released nor plans to release research showing the impact of these changes. We explore the impact of the Census Bureau's procedural changes on the racial and ethnic distributions of the Hispanic (generally and by country of origin) and the American Indian and Alaska Native populations, the two populations most impacted by these changes. We use the 2019 and 2021 one-year ACS public-use microdata and 2019 and 2021 NCHS mortality data to compare racial distributions and estimate and compare select demographic and socioeconomic characteristics, and mortality measures across the two years. Our results show that changes the Census Bureau implemented beginning with the 2020 decennial census and ACS appear to have had a significant impact on the comparability of Census Bureau race and ethnicity data. We find a significant data discontinuity impacting a wide variety of demographic, socioeconomic, and mortality statistics and analyses that rely on U.S. Census Bureau data as input for calculations. To mitigate these effects, methods that bridge race and ethnicity data between pre- and post-2020 census data are needed. Our research brings new attention and clarity to the race and ethnicity data discontinuity in Census Bureau data that started in 2020. © 2025 |
| Updates on the treatment of drug-susceptible and drug-resistant tuberculosis an official ATS/CDC/ERS/IDSA clinical practice guideline
Duarte R , Munsiff SS , Nahid P , Saukkonen JJ , Winston CA , Abubakar I , Acuña-Villaorduña C , Barry PM , Bastos ML , Carr W , Chami H , Chen LL , Chorba T , Daley CL , Garcia-Prats AJ , Holland K , Konstantinidis I , Lipman M , Mammen MJ , Migliori GB , Parvez FM , Shapiro AE , Sotgiu G , Starke JR , Starks AM , Thakore S , Wang SH , Wortham JM . Am J Respir Crit Care Med 2025 211 (1) 15-33 Background: On the basis of recent clinical trial data for the treatment of drug-susceptible and drug-resistant tuberculosis (TB), the American Thoracic Society, U.S. Centers for Disease Control and Prevention, European Respiratory Society, and Infectious Diseases Society of America have updated clinical practice guidelines for TB treatment in children and adults in settings in which mycobacterial cultures, molecular and phenotypic drug susceptibility tests, and radiographic studies, among other diagnostic tools, are available on a routine basis. Methods: A Joint Panel representing multiple interdisciplinary perspectives convened with American Thoracic Society methodologists to review evidence and make recommendations using the GRADE (Grading of Recommendations Assessment, Development and Evaluation) and GRADE-ADOLOPMENT (adoption, adaptation, and, as needed, de novo development of recommendations) methodology. Results: New drug-susceptible TB recommendations include the use of a novel 4-month regimen for people with pulmonary TB and a shortened 4-month regimen for children with nonsevere TB. Drug-resistant TB recommendation updates include the use of novel regimens containing bedaquiline, pretomanid, and linezolid with or without moxifloxacin. Conclusions: All-oral, shorter treatment regimens for TB are now recommended for use in eligible individuals. Copyright © 2025 by the American Thoracic Society. |
| Factors associated with tuberculosis treatment initiation among bacteriologically negative individuals evaluated for tuberculosis: An individual patient data meta-analysis
Kim S , Can MH , Agizew TB , Auld AF , Balcells ME , Bjerrum S , Dheda K , Dorman SE , Esmail A , Fielding K , Garcia-Basteiro AL , Hanrahan CF , Kebede W , Kohli M , Luetkemeyer AF , Mita C , Reeve BWP , Silva DR , Sweeney S , Theron G , Trajman A , Vassall A , Warren JL , Yotebieng M , Cohen T , Menzies NA . PLoS Med 2025 22 (1) e1004502
BACKGROUND: Globally, over one-third of pulmonary tuberculosis (TB) disease diagnoses are made based on clinical criteria after a negative bacteriological test result. There is limited information on the factors that determine clinicians' decisions to initiate TB treatment when initial bacteriological test results are negative. METHODS AND FINDINGS: We performed a systematic review and individual patient data meta-analysis using studies conducted between January 2010 and December 2022 (PROSPERO: CRD42022287613). We included trials or cohort studies that enrolled individuals evaluated for TB in routine settings. In these studies, participants were evaluated based on clinical examination and routinely used diagnostics and were followed for ≥1 week after the initial test result. We used hierarchical Bayesian logistic regression to identify factors associated with treatment initiation following a negative result on an initial bacteriological test (e.g., sputum smear microscopy (SSM), Xpert MTB/RIF). Multiple factors were positively associated with treatment initiation: male sex [adjusted odds ratio (aOR) 1.61 (1.31, 1.95)], history of prior TB [aOR 1.36 (1.06, 1.73)], reported cough [aOR 4.62 (3.42, 6.27)], reported night sweats [aOR 1.50 (1.21, 1.90)], and having HIV infection but not on ART [aOR 1.68 (1.23, 2.32)]. Treatment initiation was substantially less likely for individuals testing negative with Xpert [aOR 0.77 (0.62, 0.96)] compared to smear microscopy and declined in more recent years. We were not able assess why clinicians made treatment decisions, as these data were not available. CONCLUSIONS: Multiple factors influenced decisions to initiate TB treatment despite negative test results. Clinicians were substantially less likely to treat in the absence of a positive test result when using more sensitive, PCR-based diagnostics. |
| HIV replication under high-level cabotegravir is associated with the appearance of 3'-PPT mutations, circular DNA transcription and recombination
Wei X , Lipscomb JT , Tino AS , Cong ME , Ruone S , Bentz ML , Sheth M , Garcia-Lerma G , Johnson JA . Viruses 2024 16 (12)
The HIV integrase inhibitor, dolutegravir (DTG), in the absence of eliciting integrase (int) resistance, has been reported to select mutations in the virus 3'-polypurine tract (3'-PPT) adjacent to the 3'-LTR U3. An analog of DTG, cabotegravir (CAB), has a high genetic barrier to drug resistance and is used in formulations for treatment and long-acting pre-exposure prophylaxis. We examined whether mutations observed for DTG would emerge in vitro with CAB. HIV-1IIIB was cultured in paired experiments of continuous high (300 nM) CAB initiated 2 h or 24 h after infection. After eight months of CAB treatment, no int resistance was detected. Conversely, HIV RNA 3'-PPT mutants were detected within one month and were the majority virus by day 98. The appearance of 3'-PPT variants coincided with a rapid accumulation of HIV 1-LTR and 2-LTR circles. RNA amplification from the 3'-LTR TAR identified transcripts crossing 2-LTR circle junctions, which incorporated the adjacent U5 sequence identical to the 3'-PPT mutants. 3'-PPT variants were only identified in LTR circles and transcripts. Additionally, we found evidence of linear HIV and LTR circle recombination with human DNA at motifs homologous to 3'-PPT sequences. HIV persistence under CAB was associated with transcription and recombination of LTR circle sequences. |
| Comparing detections of Aedes Aegypti females using three types of autocidal gravid traps
Diaz-Garcia MI , Ocasio-Reed V , Felix G , Paz-Bailey G , Ng LC , Barrera R . J Am Mosq Control Assoc 2024 We compared the number of Aedes aegypti females per trap and the number of detections of this mosquito species per week during 8 wk in 3 types of autocidal gravid traps, the Centers for Disease Control and Prevention (CDC) Autocidal Gravid Ovitrap (AGO), Biogents Gravid Aedes Trap (GAT), and Singapore Gravitrap (SGT), in central Puerto Rico. These traps use the same principles for attracting gravid Ae. aegypti females as traditional ovitraps, such as dark colors, standing water, and decomposing plant materials. The traps differ in size, AGO being the biggest and SGT the smallest. Average captures of female Ae. aegypti per trap per week were 11.1, 7.2, and 1.7 in AGO, GAT, and SGT traps, respectively, a pattern consistent with the sizes of the traps. These results indicated that GAT traps and SGT traps captured 35.5% and 84.7% fewer females of Ae. aegypti, respectively, than AGO traps. Although Ae. aegypti was present in all 20 sites during the 8 wk of observations, AGO, GAT, and SGT traps did not catch specimens in 1, 9, and 58 out of 160 observations per trap type (trap-wk), respectively. Trap failures were 1, 6, and 1 for the AGO, GAT, and SGT traps, respectively. Despite the absence of females of Ae. aegypti at some sites and weeks in each of the traps, all 3 traps were able to detect the presence of this mosquito at each of the 20 sites during the 8 wk of observations and could be used for Ae. aegypti surveillance. |
| Global impact of ten-valent and 13-valent pneumococcal conjugate vaccines on invasive pneumococcal disease in all ages (the PSERENADE project): a global surveillance analysis
Bennett JC , Deloria Knoll M , Kagucia EW , Garcia Quesada M , Zeger SL , Hetrich MK , Yang Y , Herbert C , Ogyu A , Cohen AL , Yildirim I , Winje BA , von Gottberg A , Viriot D , van der Linden M , Valentiner-Branth P , Suga S , Steens A , Skoczynska A , Sinkovec Zorko N , Scott JA , Savulescu C , Savrasova L , Sanz JC , Russell F , Ricketson LJ , Puentes R , Nuorti JP , Mereckiene J , McMahon K , McGeer A , Mad'arová L , Mackenzie GA , MacDonald L , Lepp T , Ladhani SN , Kristinsson KG , Kozakova J , Klein NP , Jayasinghe S , Ho PL , Hilty M , Heyderman RS , Hasanuzzaman M , Hammitt LL , Guevara M , Grgic-Vitek M , Gierke R , Georgakopoulou T , Galloway Y , Diawara I , Desmet S , De Wals P , Dagan R , Colzani E , Cohen C , Ciruela P , Chuluunbat U , Chan G , Camilli R , Bruce MG , Brandileone MC , Bigogo G , Ampofo K , O'Brien KL , Feikin DR , Hayford K . Lancet Infect Dis 2024
BACKGROUND: Pneumococcal conjugate vaccines (PCVs) that are ten-valent (PCV10) and 13-valent (PCV13) became available in 2010. We evaluated their global impact on invasive pneumococcal disease (IPD) incidence in all ages. METHODS: Serotype-specific IPD cases and population denominators were obtained directly from surveillance sites using PCV10 or PCV13 in their national immunisation programmes and with a primary series uptake of at least 50%. Annual incidence rate ratios (IRRs) were estimated comparing the incidence before any PCV with each year post-PCV10 or post-PCV13 introduction using Bayesian multi-level, mixed-effects Poisson regressions, by site and age group. All site-weighted average IRRs were estimated using linear mixed-effects regression, stratified by product and previous seven-valent PCV (PCV7) effect (none, moderate, or substantial). FINDINGS: Analyses included 32 PCV13 sites (488 758 cases) and 15 PCV10 sites (46 386 cases) in 30 countries, primarily high income (39 sites), using booster dose schedules (41 sites). By 6 years after PCV10 or PCV13 introduction, IPD due to PCV10-type serotypes and PCV10-related serotype 6A declined substantially for both products (age <5 years: 83-99% decline; ≥65 years: 54-96% decline). PCV7-related serotype 19A increases before PCV10 or PCV13 introduction were reversed at PCV13 sites (age <5 years: 61-79% decline relative to before any PCV; age ≥65 years: 7-26% decline) but increased at PCV10 sites (age <5 years: 1·6-2·3-fold; age ≥65 years: 3·6-4·9-fold). Serotype 3 IRRs had no consistent trends for either product or age group. Non-PCV13-type IPD increased similarly for both products (age <5 years: 2·3-3·3-fold; age ≥65 years: 1·7-2·3-fold). Despite different serotype 19A trends, all-serotype IPD declined similarly between products among children younger than 5 years (58-74%); among adults aged 65 years or older, declines were greater at PCV13 (25-29%) than PCV10 (4-14%) sites, but other differences between sites precluded attribution to product. INTERPRETATION: Long-term use of PCV10 or PCV13 reduced IPD substantially in young children and more moderately in older ages. Non-vaccine-type serotypes increased approximately two-fold to three-fold by 6 years after introduction of PCV10 or PCV13. Continuing serotype 19A increases at PCV10 sites and declines at PCV13 sites suggest that PCV13 use would further reduce IPD at PCV10 sites. FUNDING: Bill & Melinda Gates Foundation as part of the WHO Pneumococcal Vaccines Technical Coordination Project. |
| Serotype distribution of remaining invasive pneumococcal disease after extensive use of ten-valent and 13-valent pneumococcal conjugate vaccines (the PSERENADE project): a global surveillance analysis
Garcia Quesada M , Peterson ME , Bennett JC , Hayford K , Zeger SL , Yang Y , Hetrich MK , Feikin DR , Cohen AL , von Gottberg A , van der Linden M , van Sorge NM , de Oliveira LH , de Miguel S , Yildirim I , Vestrheim DF , Verani JR , Varon E , Valentiner-Branth P , Tzanakaki G , Sinkovec Zorko N , Setchanova LP , Serhan F , Scott KJ , Scott JA , Savulescu C , Savrasova L , Reyburn R , Oishi K , Nuorti JP , Napoli D , Mwenda JM , Muñoz-Almagro C , Morfeldt E , McMahon K , McGeer A , Mad'arová L , Mackenzie GA , Eugenia León M , Ladhani SN , Kristinsson KG , Kozakova J , Kleynhans J , Klein NP , Kellner JD , Jayasinghe S , Ho PL , Hilty M , Harker-Jones MA , Hammitt LL , Grgic-Vitek M , Gilkison C , Gierke R , French N , Diawara I , Desmet S , De Wals P , Dalby T , Dagan R , Corcoran M , Colzani E , Chanto Chacón G , Castilla J , Camilli R , Ang M , Ampofo K , Almeida SCG , Alarcon P , O'Brien KL , Deloria Knoll M . Lancet Infect Dis 2024
BACKGROUND: Widespread use of pneumococcal conjugate vaccines (PCVs) has reduced vaccine-type invasive pneumococcal disease (IPD). We describe the serotype distribution of IPD after extensive use of ten-valent PCV (PCV10; Synflorix, GSK) and 13-valent PCV (PCV13; Prevenar 13, Pfizer) globally. METHODS: IPD data were obtained from surveillance sites participating in the WHO-commissioned Pneumococcal Serotype Replacement and Distribution Estimation (PSERENADE) project that exclusively used PCV10 or PCV13 (hereafter PCV10 and PCV13 sites, respectively) in their national immunisation programmes and had primary series uptake of at least 70%. Serotype distribution was estimated for IPD cases occurring 5 years or more after PCV10 or PCV13 introduction (ie, the mature period when the serotype distribution had stabilised) using multinomial Dirichlet regression, stratified by PCV product and age group (<5 years, 5-17 years, 18-49 years, and ≥50 years). FINDINGS: The analysis included cases occurring primarily between 2015 and 2018 from 42 PCV13 sites (63 362 cases) and 12 PCV10 sites (6806 cases) in 41 countries. Sites were mostly high income (36 [67%] of 54) and used three-dose or four-dose booster schedules (44 [81%]). At PCV10 sites, PCV10 serotypes caused 10·0% (95% CI 6·3-12·9) of IPD cases in children younger than 5 years and 15·5% (13·4-19·3) of cases in adults aged 50 years or older, while PCV13 serotypes caused 52·1% (49·2-65·4) and 45·6% (40·0-50·0), respectively. At PCV13 sites, PCV13 serotypes caused 26·4% (21·3-30·0) of IPD cases in children younger than 5 years and 29·5% (27·5-33·0) of cases in adults aged 50 years or older. The leading serotype at PCV10 sites was 19A in children younger than 5 years (30·6% [95% CI 18·2-43·1]) and adults aged 50 years or older (14·8% [11·9-17·8]). Serotype 3 was a top-ranked serotype, causing about 9% of cases in children younger than 5 years and 14% in adults aged 50 years or older at both PCV10 and PCV13 sites. Across all age and PCV10 or PCV13 strata, the proportion of IPD targeted by higher-valency PCVs beyond PCV13 was 4·1-9·7% for PCV15, 13·5-36·0% for PCV20, 29·9-53·8% for PCV21, 15·6-42·0% for PCV24, and 31·5-50·1% for PCV25. All top-ten ranked non-PCV13 serotypes are included in at least one higher-valency PCV. INTERPRETATION: The proportion of IPD due to serotypes included in PCVs in use was low in mature PCV10 and PCV13 settings. Serotype distribution differed between PCV10 and PCV13 sites and age groups. Higher-valency PCVs target most remaining IPD and are expected to extend impact. FUNDING: Bill & Melinda Gates Foundation as part of the WHO Pneumococcal Vaccines Technical Coordination Project. |
| SHIV remission in macaques with early treatment initiation and ultra long-lasting antiviral activity
Daly MB , Dinh C , Holder A , Rudolph D , Ruone S , Swaims-Kohlmeier A , Khalil G , Sharma S , Mitchell J , Condrey J , Kim D , Pan Y , Curtis K , Williams P , Spreen W , Heneine W , García-Lerma JG . Nat Commun 2024 15 (1) 10550 Studies in SIV-infected macaques show that the virus reservoir is particularly refractory to conventional suppressive antiretroviral therapy (ART). We posit that optimized ART regimens designed to have robust penetration in tissue reservoirs and long-lasting antiviral activity may be advantageous for HIV or SIV remission. Here we treat macaques infected with RT-SHIV with oral emtricitabine/tenofovir alafenamide and long-acting cabotegravir/rilpivirine without (n = 4) or with (n = 4) the immune activator vesatolimod after the initial onset of viremia. We document full suppression in all animals during treatment (4-12 months) and no virus rebound after treatment discontinuation (1.5-2 years of follow up) despite CD8 + T cell depletion. We show efficient multidrug penetration in virus reservoirs and persisting rilpivirine in plasma for 2 years after the last dose. Our results document a type of virus remission that is achieved through early treatment initiation and provision of ultra long-lasting antiviral activity that persists after treatment cessation. |
| Utility of the 2019 EULAR/ACR SLE classification criteria for predicting mortality and hospitalisation: development and cross-validation of ominosity score
Figueroa-Parra G , Hanson AC , Sanchez-Rodriguez A , Meade-Aguilar JA , González-Treviño M , Cuéllar-Gutiérrez MC , Barbour KE , Duarte-García A , Crowson C . RMD Open 2024 10 (4) OBJECTIVE: The 2019 European Alliance of Associations for Rheumatology (EULAR)/American College of Rheumatology (ACR) systemic lupus erythematosus (SLE) classification criteria score (≥20 points) has been associated with poor outcomes. We aimed to evaluate its utility as a predictor for mortality and hospitalisation and to derive and validate an ominosity score based on the SLE classification criteria set. METHODS: Incident patients with SLE in a population-based cohort were included. The association between the 2019 EULAR/ACR SLE score and mortality and hospitalisation was assessed using Cox regression adjusted for age, sex and calendar year. An ominosity score for mortality was developed based on the SLE criteria set. The least absolute shrinkage and selection operator method was used to estimate model coefficients. Concordance and calibration were assessed by cross-validation and by plotting the observed event rates against the deciles of predicted probabilities. RESULTS: Among 374 patients with incident SLE, a EULAR/ACR score ≥20 points was not associated with an increased risk of mortality (HR 1.17, 95% CI 0.67 to 2.03) or first hospitalisation (HR 1.14, 95% CI 0.79 to 1.64) compared with a score ≤19 points. The derived ominosity score for mortality included age, sex, thrombocytopaenia, neuropsychiatric manifestations, subacute cutaneous or discoid lupus, non-scarring alopecia, inflammatory arthritis, renal involvement, antiphospholipid antibodies and hypocomplementaemia. This model demonstrated a concordance=0.76 with adequate calibration. Age and sex were the main predictors, as seen in the model including just age, sex and year (concordance=0.77). CONCLUSION: The 2019 EULAR/ACR SLE criteria score was not associated with mortality and hospitalisation. The derived ominosity score for mortality presented good prediction for mortality but was not better than age and sex alone. |
| How Right Now/Qué Hacer Ahora: Findings from an evaluation of a national mental health and coping campaign amidst the COVID-19 pandemic
Burke-Garcia A , Berktold J , Bailey LR , Wagstaff L , Thomas CW , Crick C , Mitchell EW , Verlenden JMV , Puddy RW , Mercado MC , Friedman A , Bruss K , Xia K , Sawyer J , Feng M , Johnson-Turbes A , Van Vleet R , Afanaseva D , Zhao X , Nelson P . Am J Orthopsychiatry 2024 Beyond its physical health impact, the COVID-19 pandemic also resulted in grief from loss of loved ones, isolation due to social distancing, stress, fear, and economic distress-all of which impacted mental health. How Right Now/Qué Hacer Ahora (HRN) is an award-winning, national campaign that provides emotional support to people disproportionately affected by COVID-19. We conducted a theory-based, culturally responsive evaluation to assess the campaign's effect on coping behaviors and resiliency between summer 2020 and spring 2021. We surveyed HRN's priority audiences (older adults/caregivers and those with preexisting health conditions, experiencing violence, or economic distress) in English and Spanish using NORC's national probability panel, AmeriSpeak, over three waves. We also analyzed social media data and monitored HRN website traffic and triangulated these data to understand the campaign's full impact. Campaign exposure was associated with people who were experiencing higher levels of stress and were more likely to seek information to support their emotional well-being. Campaign exposure was also positively associated with increased feelings of resilience and confidence in using coping strategies, especially for people experiencing violence or economic distress and people from racial and ethnic groups. Findings demonstrate the campaign's success in reaching its intended audiences with the mental health support they needed. Additionally, the HRN evaluation's design illustrates how the use of multiple data sources can elucidate a deeper understanding of campaign impact. Findings underscore that culturally responsive health communication interventions-like HRN-can provide needed mental health support and resources to disproportionately affected communities. (PsycInfo Database Record (c) 2024 APA, all rights reserved). |
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