Advanced Molecular Detection Clips Content (Published on 12/19/2024)
NEWS
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Report describes spread of highly drug-resistant cholera strain
Dall C. CIDRAP, Dec 12, 2024. -
Ancient DNA suggests syphilis originated in Americas before ravaging Europe
Johnson CY. Washington Post, Dec 18, 2024. -
Flu surveillance flags probable H5 avian flu case in Delaware
Schnirring L. CIDRAP, Dec 17, 2024. -
2024 Breakthrough of the Year: The long shot
Cohen J. Science, Dec 2024. -
This drug is the 'breakthrough of the year' — and it could mean the end of the HIV epidemic
Cox D, Guinle MI. NPR, Dec 12, 2024. -
‘Unprecedented risk’ to life on Earth: Scientists call for halt on ‘mirror life’ microbe research
Sample I. Guardian, Dec 12, 2024.
EVENTS / TRAINING / WEB RESOURCES
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What is host genomics and infectious disease?
(website) PHG Foundation -
Leveraging Biological Data
(report) National Security Commission on Emerging Biotechnology, Dec 2024.
CONCEPTS / COMMENTS
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Confronting risks of mirror life.
Katarzyna P Adamala et al. Science 2024 12 eads9158 -
Researchers' perspectives on the integration of molecular and genomic data into malaria elimination programmes in Africa: a qualitative study.
Paulina Tindana et al. Malar J 2024 12 (1) 385
METHODS / TOOLS
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Polyphonia: detecting inter-sample contamination in viral genomic sequencing data.
L A Krasilnikova et al. Bioinformatics 2024 12 -
Improved influenza A whole-genome sequencing protocol.
Iryna V Goraichuk et al. Front Cell Infect Microbiol 2024 12 1497278
EVOLUTION / ECOLOGY / POPULATIONS
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Genomic perspective on the bacillus causing paratyphoid B fever.
Jane Hawkey et al. Nat Commun 2024 12 (1) 10143
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Ancient genomes reveal a deep history of treponemal disease in the Americas.
Rodrigo Barquera et al. Nature 2024 12 -
Phylodynamic Investigation of Yellow Fever Virus Sheds New Insight on Geographic Dispersal Across Africa.
Babatunde Olanrewaju Motayo et al. Evol Bioinform Online 2024 12 11769343241309247
PATHOGENICITY / ANTIMICROBIAL RESISTANCE
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Genomic and growth fitness study of extended-spectrum β-lactamase-producing Escherichia coli from bloodstream infections after introduction of a national 4C antimicrobial stewardship policy in Scotland.
Istifanus Nkene et al. Int J Antimicrob Agents 2024 11 (6) 107380
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Ceftriaxone-resistant Neisseria gonorrhoeae detected in England, 2015-24: an observational analysis.
Helen Fifer et al. J Antimicrob Chemother 2024 10 (12) 3332-3339 -
Acquired Human Immunodeficiency Virus Type 1 Drug Resistance in Rhode Island, USA, 2004-2021.
Su Aung et al. J Infect Dis 2024 7 (6) 1422-1433
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The measles virus matrix F50S mutation from a lethal case of subacute sclerosing panencephalitis promotes receptor-independent neuronal spread.
Iris Yousaf et al. J Virol 2024 12 e0175024
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Genetic surveillance shows spread of ACT resistance during period of malaria decline in Vietnam (2018-2020).
Johanna Helena Kattenberg et al. Front Genet 2024 12 1478706
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Genome-wide association studies unveil major genetic loci driving insecticide resistance in Anopheles funestus in four eco-geographical settings across Cameroon.
Mahamat Gadji et al. BMC Genomics 2024 12 (1) 1202
DETECTION / DIAGNOSIS
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Novel approach using automated target enrichment enables culture-independent accurate whole-genome sequencing of Neisseria gonorrhoeae directly from clinical urogenital and extragenital specimens.
Daniel Golparian et al. J Antimicrob Chemother 2024 12 -
Establishing methods to monitor H5N1 influenza virus in dairy cattle milk.
Elyse Stachler et al. medRxiv 2024 12 -
High Diversity in Genotypes of Human Rhinovirus Contributes to High Prevalence in Beijing, 2018-2022: A Retrospective Multiple-Center Epidemiological Study.
Qing Wang et al. Biomed Environ Sci 2024 12 (11) 1262-1272
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Entomological surveillance during a major CHIKV outbreak in northwestern São Paulo: insights from São José do Rio Preto.
Cecília Artico Banho et al. medRxiv 2024 12
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Point-of-care testing diagnosis of African swine fever virus by targeting multiple genes with enzymatic recombinase amplification and CRISPR/Cas12a System.
Shinuo Cao et al. Front Cell Infect Microbiol 2024 12 1474825 -
National and Regional Molecular Epidemiology of HIV-1 - China, 2004-2023.
Dong Wang et al. China CDC Wkly 2024 12 (48) 1257-1263
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COMPARISON OF NANOPORE AND CLASSICAL SANGER SEQUENCING TO IDENTIFY MOSQUITO BLOODMEAL HOSTS.
Linda Kothera et al. J Am Mosq Control Assoc 2024 12
EPIDEMIOLOGY / OUTBREAKS / TRANSMISSION
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Cluster of Extensively Drug-Resistant Shigella sonnei Carrying bla in Los Angeles, California, 2023-2024.
J R Caldera et al. Am J Infect Control 2024 12
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Using genomic epidemiology and geographic activity spaces to investigate tuberculosis outbreaks in Botswana.
Chelsea R Baker et al. medRxiv 2024 12 -
Estimating pathogen spread using structured coalescent and birth-death models: A quantitative comparison.
Sophie Seidel et al. Epidemics 2024 10 100795 -
A 4-year outbreak of MRSA ST72-MRSA-IV spa type t1597 in a surgical high dependency unit in Ireland linked to repeated healthcare worker recolonisation.
Deirdre Brady et al. Infect Prev Pract 2024 12 (1) 100421
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Internal migrants as drivers of long-distance cross-regional transmission of tuberculosis in China.
Meng Li et al. Clin Microbiol Infect 2024 9 (1) 71-77 -
Genomic and transmission dynamics of the 2024 Marburg Virus Outbreak in Rwanda.
Yvan Butera et al. Nat Med 2024 12 -
Phylodynamics for HIV Prevention: A Miami-Dade Case Study.
Sanjay R Mehta et al. J Infect Dis 2024 12 -
Using HIV and Hepatitis C Molecular Epidemiology to Investigate Assisted Partner Services Recruitment Among People Who Inject Drugs in Kenya.
Hanley Kingston et al. AIDS Res Hum Retroviruses 2024 12
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A phylogenetic assessment of HIV-1 transmission trends among people who inject drugs from Coastal and Nairobi, Kenya.
Hanley Kingston et al. Virus Evol 2024 12 (1) veae092 -
A retrospective genomic characterisation of the 2022 mpox outbreak in Belgium, and in vitro assessment of three antiviral compounds.
Tony Wawina-Bokalanga et al. EBioMedicine 2024 11 105488
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Risk of Transmission of Vaccine-Strain Rotavirus in a Neonatal Intensive Care Unit That Routinely Vaccinates.
Morgan A Zalot et al. Pediatrics 2024 12
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An outbreak of influenza A(H1N1)pdm09 antigenic variants exhibiting cross-resistance to oseltamivir and peramivir in an elementary school in Japan, September 2024.
Emi Takashita et al. Euro Surveill 2024 12 (50)
HOST-MICROBE INTERACTIONS
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Noninvasive, microbiome-based diagnosis of inflammatory bowel disease.
Jiaying Zheng et al. Nat Med 2024 10 (12) 3555-3567 -
Sex-Specific HLA Alleles Contribute to the Modulation of COVID-19 Severity.
Serena Spartano et al. Int J Mol Sci 2024 12 (23)
indicates that at least one CDC-affiliated author;
indicates that the article addresses aspects of implementation or evaluation in clinical or public health practice. Disclaimer: Articles listed in the Advanced Molecular Detection Clips are selected by Public Health Genomics Branch to provide current awareness of the scientific literature and news. Inclusion in the clips does not necessarily represent the views of the Centers for Disease Control and Prevention nor does it imply endorsement of the article's methods or findings. CDC and DHHS assume no responsibility for the factual accuracy of the items presented. The selection, omission, or content of items does not imply any endorsement or other position taken by CDC or DHHS. Opinion, findings and conclusions expressed by the original authors of items included in the Clips, or persons quoted therein, are strictly their own and are in no way meant to represent the opinion or views of CDC or DHHS. References to publications, news sources, and non-CDC Websites are provided solely for informational purposes and do not imply endorsement by CDC or DHHS.
- Page last reviewed:Feb 1, 2024
- Page last updated:Jan 16, 2025

