Advanced Molecular Detection Clips Content (Published on 11/16/2023)
NEWS
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Illumina to Offer Lower Prices on Pathogen Sequencing for Public Health in Lower-Income Countries
GenomeWeb, Nov 13, 2023. -
CDC warns about Salmonella outbreak linked to recalled dry pet food
Schnirring L. CIDRAP, Nov 10, 2023. -
Study shows first evidence of HPV strain replacement
Soucheray S. CIDRAP, Nov 9, 2023. -
Deepfakes could supercharge health care's misinformation problem
Reed T. Axios, Nov 14, 2023. -
AI writes summaries of preprints in bioRxiv trial
Callaway E. Nature, Nov 14, 2023.
CONCEPTS / COMMENTS
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Incongruence in the phylogenomics era.
Jacob L Steenwyk et al. Nat Rev Genet 2023 6 (12) 834-850 -
The HIV epidemic 40 years on.
Linda-Gail Bekker et al. Nat Rev Microbiol 2023 10 (12) 767-768 -
Data Sharing - A New Era for Research Funded by the U.S. Government.
Joseph S Ross et al. N Engl J Med 2023 11 -
Surveillance for variants of SARS-CoV-2 to inform risk assessments.
Homa Attar Cohen et al. Bull World Health Organ 2023 11 (11) 707-716 -
Strengthening influenza surveillance capacity in the Eastern Mediterranean Region: Nearly two decades of direct support from the United States Centers for Disease Control and Prevention.
Kinda Zureick et al. Influenza Other Respir Viruses 2023 11 (11) e13220
METHODS / TOOLS
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Development of a portable on-site applicable metagenomic data generation workflow for enhanced pathogen and antimicrobial resistance surveillance.
Bram Bloemen et al. Sci Rep 2023 11 (1) 19656 -
The European Nucleotide Archive in 2023.
David Yuan et al. Nucleic Acids Res 2023 11 -
CGG toolkit: Software components for computational genomics.
Dimitrios Vasileiou et al. PLoS Comput Biol 2023 11 (11) e1011498 -
Optimal reference genes for RNA tissue analysis in small animal models of hemorrhagic fever viruses.
Katherine A Davies et al. Sci Rep 2023 11 (1) 19384 -
Rapid profiling of Plasmodium parasites from genome sequences to assist malaria control.
Jody E Phelan et al. Genome Med 2023 11 (1) 96
EVOLUTION / ECOLOGY / POPULATIONS
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Population structure of Salmonella enterica Typhi in Harare, Zimbabwe (2012-19) before typhoid conjugate vaccine roll-out: a genomic epidemiology study.
Gaetan Thilliez et al. Lancet Microbe 2023 11 -
Genomic profiling of extended-spectrum β-lactamase-producing Escherichia coli from Pets in the United Arab Emirates: Unveiling colistin resistance mediated by mcr-1.1 and its probable transmission from chicken meat - A One Health perspective.
Ihab Habib et al. J Infect Public Health 2023 11 -
The emergence and diversification of a zoonotic pathogen from within the microbiota of intensively farmed pigs.
Gemma G R Murray et al. Proc Natl Acad Sci U S A 2023 11 (47) e2307773120 -
Viral genomic features predict orthopoxvirus reservoir hosts.
Katie K Tseng et al. bioRxiv 2023 11
PATHOGENICITY / ANTIMICROBIAL RESISTANCE
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Emergence of bedaquiline-resistant tuberculosis and of multidrug-resistant and extensively drug-resistant Mycobacterium tuberculosis strains with rpoB Ile491Phe mutation not detected by Xpert MTB/RIF in Mozambique: a retrospective observational study.
Ivan Barilar et al. Lancet Infect Dis 2023 11 -
Impact of pretreatment low-abundance HIV-1 drug resistance on virological failure after 1 year of antiretroviral therapy in China.
Miaomiao Li et al. J Antimicrob Chemother 2023 9 (11) 2743-2751
DETECTION / DIAGNOSIS
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Recombinase Polymerase Amplification-Based Biosensors for Rapid Zoonoses Screening.
Xinrui Feng et al. Int J Nanomedicine 2023 11 6311-6331 -
Advantages and limitations of current diagnostic laboratory approaches in syphilis and congenital syphilis.
Weiping Cao et al. Expert Rev Anti Infect Ther 2023 11 -
First identification of the SARS-COV-2/XBB.1.5 sublineage among indigenous COVID-19 cases through the influenza sentinel surveillance system in Niger.
Adamou Lagare et al. Heliyon 2023 11 (11) e20916 -
Monoclonal Antibodies as SARS-CoV-2 Serology Standards: Experimental Validation and Broader Implications for Correlates of Protection.
Lili Wang et al. Int J Mol Sci 2023 11 (21) -
Untargeted metagenomic sequencing identifies Toscana virus in patients with idiopathic meningitis, southern Spain, 2015 to 2019.
Fabiana Gámbaro et al. Euro Surveill 2023 11 (45) -
A novel duplex qualitative real-time PCR assay for the detection and differentiation of Plasmodium ovale curtisi and Plasmodium ovale wallikeri malaria.
Wenqiao He et al. medRxiv 2023 11 -
Detection of Anopheles stephensi Mosquitoes by Molecular Surveillance, Kenya.
Eric O Ochomo et al. Emerg Infect Dis 2023 11 (12)
EPIDEMIOLOGY / OUTBREAKS / TRANSMISSION
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Strain of Multidrug-Resistant Salmonella Newport Remains Linked to Travel to Mexico and U.S. Beef Products - United States, 2021-2022.
Laura Ford et al. MMWR Morb Mortal Wkly Rep 2023 11 (45) 1225-1229 -
Investigation of an international water polo tournament in Czechia as a potential source for early introduction of the SARS-CoV-2 Omicron variant into Belgium, Switzerland and Germany, November 2021.
Christoph Rudin et al. Euro Surveill 2023 11 (45) -
Epidemiological characteristics of HIV transmission in southeastern China from 2015 to 2020 based on HIV molecular network.
Zhenghua Wang et al. Front Public Health 2023 11 1225883 -
Molecular epidemiology of HIV-1 among adult female sex workers at the Guatemala-Mexico border.
Olivia Springfield et al. Glob Public Health 2023 11 (1) 2278873
ANTIMICROBIALS / VACCINES / INTERVENTIONS
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Identification of the flavivirus conserved residues in the envelope protein hinge region for the rational design of a candidate West Nile live-attenuated vaccine.
Bailey E Maloney et al. NPJ Vaccines 2023 11 (1) 172
HOST-MICROBE INTERACTIONS
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HLA-DQB1*06 and Select Neighboring HLA Variants Predict Chlamydia Reinfection Risk.
Kanupriya Gupta et al. Int J Mol Sci 2023 11 (21) -
Genetic variants associated with hantavirus infection in a reservoir host are related to regulation of inflammation and immune surveillance.
Anna A Pérez-Umphrey et al. Infect Genet Evol 2023 11 105525 -
Co-evolution of immunity and seasonal influenza viruses.
Alvin X Han et al. Nat Rev Microbiol 2023 8 (12) 805-817 -
In silico prediction of interaction between Nipah virus attachment glycoprotein and host cell receptors Ephrin-B2 and Ephrin-B3 in domestic and peridomestic mammals.
Ananya Ferdous Hoque et al. Infect Genet Evol 2023 11 105516 -
T-Cell Exhaustion in HIV-1/Hepatitis C Virus Coinfection Is Reduced After Successful Treatment of Chronic Hepatitis C.
Kamila Caraballo Cortés et al. Open Forum Infect Dis 2023 11 (11) ofad514 -
The Bern Birth Cohort (BeBiCo) to study the development of the infant intestinal microbiota in a high-resource setting in Switzerland: rationale, design, and methods.
Luca Cecchini et al. BMC Pediatr 2023 11 (1) 560
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Disclaimer: Articles listed in the Advanced Molecular Detection Clips are selected by Public Health Genomics Branch to provide current awareness of the scientific literature and news. Inclusion in the clips does not necessarily represent the views of the Centers for Disease Control and Prevention nor does it imply endorsement of the article's methods or findings. CDC and DHHS assume no responsibility for the factual accuracy of the items presented. The selection, omission, or content of items does not imply any endorsement or other position taken by CDC or DHHS. Opinion, findings and conclusions expressed by the original authors of items included in the Clips, or persons quoted therein, are strictly their own and are in no way meant to represent the opinion or views of CDC or DHHS. References to publications, news sources, and non-CDC Websites are provided solely for informational purposes and do not imply endorsement by CDC or DHHS.
- Page last reviewed:Feb 1, 2024
- Page last updated:Sep 5, 2024