Advanced Molecular Detection Clips Content (Published on 09/27/2018)
NEWS
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Puppies are making people sick--and it's peoples fault
Branswell H. STAT, Sep 20, 2018. -
Genome of Medieval Relapsing Fever Pathogen Provides Insights Into Microbe's Evolution
GenomeWeb, Sep 24, 2018. -
A new vaccine raises hopes of someday curbing the tuberculosis epidemic
Cunningham A.Science News, Sep 25, 2018. -
DNA Sequencing Holds Promise for Pinpointing TB Drug Susceptibility
Walker M. MedPage Today, Sep 26, 2018. -
The end of HIV transmission in the U.S.: A once-unthinkable dream becomes an openly discussed goal
Branswell H. STAT, Sep 26, 2018. -
Scientists use gene drive to eradicate lab mosquitoes for the first time
Swetlitz I. STAT, Sep 24, 2018. -
Genetics, Gut Microbes Linked to Blood Levels of Cardiovascular Disease-Related Proteins
GenomeWeb, Sep 24, 2018. -
Fecal microbiota transplantation helps restore beneficial bacteria in cancer patients
NIH, Sep 26, 2018.
EVENTS / TRAINING / WEB RESOURCES
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Open data, open curation
(metadata curation tool) Sci Data Rep, Sep 25, 2018. -
The Road Less Traveled: Genomic Epidemiology Capacity in State Public Health Programs
(blog post) Khoury MJ. CDC/CSELS/OPHG, Sep 24, 2018.
POLICY
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Should Genetic Testing for Variants Associated with Influenza Infection Be Mandatory for Health Care Employees?
Lewis Michelle Huckaby et al. AMA journal of ethics 2018 Sep (9) E819-825
CONCEPTS / COMMENTS
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Addressing the Tuberculosis Epidemic- 21st Century Research for an Ancient Disease
Fauci A. JAMA, Sep 26, 2018. -
Adenoviromics: Mining the Human Adenovirus Species D Genome.
Ismail Ashrafali M et al. Frontiers in microbiology 2018 2178 -
Evolutionary emergence of infectious diseases in heterogeneous host populations.
Chabas Hélène et al. PLoS biology 2018 Sep (9) e2006738 -
Infection and immunity: insights and therapeutic strategies through genomic analysis of the host, pathogen, and hostpathogen interaction
Simundza J. Genome Med, Sep 26, 2018.
METHODS / TOOLS
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Clinical Mass Spectrometry in the Bioinformatics Era: A Hitchhiker's Guide.
Chong Yeow-Kuan et al. Computational and structural biotechnology journal 2018 316-334 -
A systematic method for surveying data visualizations and a resulting genomic epidemiology visualization typology: GEViT.
Crisan Anamaria et al. Bioinformatics (Oxford, England) 2018 Sep -
Application of whole genome data for in silico evaluation of primers and probes routinely employed for the detection of viral species by RT-qPCR using dengue virus as a case study.
Vanneste Kevin et al. BMC bioinformatics 2018 Sep (1) 312 -
Using non-invasive metagenomics to characterize viral communities from wildlife.
Bergner Laura M et al. Molecular ecology resources 2018 Sep -
Comparison of Fecal Collection Methods for Microbiome and Metabolomics Studies.
Wang Zheng et al. Frontiers in cellular and infection microbiology 2018 301
EVOLUTION / ECOLOGY / POPULATIONS
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Genetic and population analyses of Vibrio parahaemolyticus isolates from three major coastal regions in China.
Li Ping et al. Future microbiology 2018 Sep -
Molecular epidemiology of coxsackievirus A6 circulating in Hong Kong reveals common neurological manifestations and emergence of novel recombinant groups.
Lau Susanna K P et al. Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology 2018 Sep 43-49 -
Identification of novel adenovirus genotype 90 in children from Bangladesh.
Houldcroft Charlotte J et al. Microbial genomics 2018 Sep -
Deep Sequencing of H7N9 Influenza A Viruses from 16 Infected Patients from 2013 to 2015 in Shanghai Reveals Genetic Diversity and Antigenic Drift.
Xiao Yong-Li et al. mSphere 2018 Sep (5) -
Molecular characterization and phylogenetic analysis of dengue viruses imported into Taiwan during 2011-2016.
Yang Cheng-Fen et al. PLoS neglected tropical diseases 2018 Sep (9) e0006773 -
Characterization of Aspergillus niger Isolated from the International Space Station.
Romsdahl Jillian et al. mSystems (5)
PATHOGENICITY / ANTIMICROBIAL RESISTANCE
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MinION nanopore sequencing identifies the position and structure of bacterial antibiotic resistance determinants in a multidrug-resistant strain of enteroaggregative Escherichia coli.
Greig David R et al. Microbial genomics 2018 Sep -
Molecular characterization of plasmid-encoded Tripoli MBL 1 (TMB-1) in Enterobacteriaceae.
Gauthier Lauraine et al. The Journal of antimicrobial chemotherapy 2018 Sep -
Resistant Streptococcus pneumoniae strains in children with acute otitis media- high risk of persistent colonization after treatment.
Korona-Glowniak Izabela et al. BMC infectious diseases 2018 Sep (1) 478 -
The Coming of Age of Drug-Susceptibility Testing for Tuberculosis.
Cox Helen et al. The New England journal of medicine 2018 Sep -
Prediction of Susceptibility to First-Line Tuberculosis Drugs by DNA Sequencing
CRyPTIC Consortium, 100,000 Genomes Project. New Engl J Med, Sep 26, 2018. -
Whole genome sequencing reveals genetic signature of bedaquiline resistance in a clinical isolate of Mycobacterium tuberculosis.
Chawla Kiran et al. Journal of global antimicrobial resistance 2018 Sep
DETECTION / DIAGNOSIS
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Smartphone-based pathogen diagnosis in urinary sepsis patients.
Barnes Lucien et al. EBioMedicine 2018 Sep -
Pulmonary Metagenomic Sequencing Suggests Missed Infections in Immunocompromised Children.
Zinter M S et al. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2018 Sep -
Genetic Diversity and Prevalence of Nontuberculous Mycobacteria Isolated from Clinical Samples in Tehran, Iran.
Davari Mehdi et al. Microbial drug resistance (Larchmont, N.Y.) 2018 Sep -
Diagnosing Emerging Fungal Threats: A One Health Perspective.
Ghosh Pria N et al. Frontiers in genetics 2018 376 -
Molecular assays for antimalarial drug resistance surveillance: A target product profile.
Nsanzabana Christian et al. PloS one 2018 (9) e0204347 -
Update on laboratory diagnosis of amoebiasis.
Saidin Syazwan et al. European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology 2018 Sep
EPIDEMIOLOGY / OUTBREAKS / TRANSMISSION
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Whole genome sequencing reveals a prolonged and spatially spread nosocomial outbreak of PVL positive MRSA (USA300).
Kossow Annelene et al. The Journal of hospital infection 2018 Sep -
Investigation of an outbreak caused by antibiotic susceptible Klebsiella oxytoca in a neonatal intensive care unit in Norway.
Rønning Torunn Gresdal et al. Acta paediatrica (Oslo, Norway : 1992) 2018 Sep -
Use of whole genome sequencing to complement characterisation of a typhoid fever outbreak among a Marshallese community: Oklahoma, 2015.
L J Burnsed et al. Epidemiol Infect 2018 9 e11 -
Environmental transmission of Clostridioides difficile ribotype 027 at a long-term care facility; an outbreak investigation guided by whole genome sequencing.
Endres Bradley T et al. Infection control and hospital epidemiology 2018 Sep 1-8 -
Mucormycosis outbreak due to Rhizopus microsporus after arthroscopic anterior cruciate ligament reconstruction surgery evaluated by RAPD and MALDI-TOF Mass spectrometry.
Gamarra S et al. Journal de mycologie medicale 2018 Sep
ANTIMICROBIALS / VACCINES / INTERVENTIONS
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Dynamic changes of circulating miRNAs induced by the Ebola virus vaccine VSV-EBOV.
Fischer T et al. Vaccine 2018 Sep -
Large outbreak of mumps virus genotype G among vaccinated students in Norway, 2015 to 2016.
Veneti Lamprini et al. Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin 2018 Sep (38) -
Genomic evidence that the live Chlamydia abortus vaccine strain 1B is not attenuated and has the potential to cause disease.
Longbottom David et al. Vaccine 2018 06 (25) 3593-3598 -
Influence of non-polio enteroviruses and the bacterial gut microbiota on oral poliovirus vaccine response: a study from south India.
Praharaj Ira et al. The Journal of infectious diseases 2018 Sep -
Rapid travel to a Zika vaccine: are we heading towards success or more questions?
Britto Carl et al. Expert opinion on biological therapy 2018 Sep -
Anti-Sense Antibiotic Agents as Treatment for Bacterial Infections.
Stewart David B et al. Surgical infections 2018 Sep -
Mission Accomplished? We Need a Guide to the 'Post Release' World of Wolbachia for Aedes-borne Disease Control.
Ritchie Scott A et al. Trends in parasitology 2018 03 (3) 217-226
HOST-MICROBE INTERACTIONS
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Methylation of High-Risk Human Papillomavirus Genomes are Associated with Cervical Precancer in HIV-positive Women.
Gradíssimo Ana et al. Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology 2018 Sep -
Comparison of Common Monogenic Defects in a Large Predominantly Antibody Deficiency Cohort.
Yazdani Reza et al. The journal of allergy and clinical immunology. In practice 2018 Sep -
Maternal gut and breast milk microbiota affect infant gut antibiotic resistome and mobile genetic elements.
Pärnänen Katariina et al. Nature communications 2018 Sep (1) 3891 -
Linking gut microbiota, metabolic syndrome and economic status based on a population-level analysis.
He Yan et al. Microbiome 2018 Sep (1) 172
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Disclaimer: Articles listed in the Advanced Molecular Detection Clips are selected by Public Health Genomics Branch to provide current awareness of the scientific literature and news. Inclusion in the clips does not necessarily represent the views of the Centers for Disease Control and Prevention nor does it imply endorsement of the article's methods or findings. CDC and DHHS assume no responsibility for the factual accuracy of the items presented. The selection, omission, or content of items does not imply any endorsement or other position taken by CDC or DHHS. Opinion, findings and conclusions expressed by the original authors of items included in the Clips, or persons quoted therein, are strictly their own and are in no way meant to represent the opinion or views of CDC or DHHS. References to publications, news sources, and non-CDC Websites are provided solely for informational purposes and do not imply endorsement by CDC or DHHS.
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- Page last updated:Aug 29, 2024