Advanced Molecular Detection Clips Content (Published on 06/20/2024)
NEWS
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FDA modifies strain recommendation for fall COVID vaccine amid variant shifts, uptick in cases
Schnirring L. CIDRAP, Jun 14, 2024. -
What causes long COVID? Case builds for rogue antibodies
Wong C. Nature, Jun 13, 2024. -
A Bird-Flu Pandemic in People? Here’s What It Might Look Like.
Mandavilli A.New York Times, Jun 17, 2024. -
Malaria History, Colonization-Related Spread Revealed in Ancient DNA Sequencing Study
GenomeWeb, Jun 13, 2024.
CONCEPTS / COMMENTS
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A one health approach for monitoring antimicrobial resistance: developing a national freshwater pilot effort.
Alison M Franklin et al. Front Water 2024 6 -
Empowering public health: building advanced molecular surveillance in resource-limited settings through collaboration and capacity-building
Koudokpon H, et al. Front Health Serv, Jun 18, 2024. -
Zoonotic infections by avian influenza virus: changing global epidemiology, investigation, and control.
Mei Kang et al. Lancet Infect Dis 2024 6
METHODS / TOOLS
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PHA4GE quality control contextual data tags: standardized annotations for sharing public health sequence datasets with known quality issues to facilitate testing and training.
Emma J Griffiths et al. Microb Genom 2024 6 (6) -
spread.gl: visualising pathogen dispersal in a high-performance browser application.
Yimin Li et al. medRxiv 2024 6 -
Methods for Genomic Epidemiology of Bacterial Pathogens: Example Salmonella.
Haley Sanderson et al. Methods Mol Biol 2024 6 19-37 -
The novel 2024 WHO Neisseria gonorrhoeae reference strains for global quality assurance of laboratory investigations and superseded WHO N. gonorrhoeae reference strains-phenotypic, genetic and reference genome characterization.
Magnus Unemo et al. J Antimicrob Chemother 2024 6
EVOLUTION / ECOLOGY / POPULATIONS
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Modeling the velocity of evolving lineages and predicting dispersal patterns.
Paul Bastide et al. bioRxiv 2024 6 -
The molecular epidemiology of a dengue virus outbreak in Taiwan: population wide versus infrapopulation mutation analysis.
You-Yuan Tsai et al. PLoS Negl Trop Dis 2024 6 (6) e0012268 -
Influenza A genomic diversity during human infections underscores the strength of genetic drift and the existence of tight transmission bottlenecks.
Michael A Martin et al. Virus Evol 2024 6 (1) veae042 -
Molecular epidemiology and genetic evolution of avian influenza H5N1 subtype in Nigeria, 2006 to 2021.
Ridwan O Adesola et al. Virus Genes 2024 6 -
Ancient Plasmodium genomes shed light on the history of human malaria.
Megan Michel et al. Nature 2024 6 -
Global genomics of Aedes aegypti unveils widespread and novel infectious viruses capable of triggering a small RNA response.
Shruti Gupta et al. bioRxiv 2024 6
PATHOGENICITY / ANTIMICROBIAL RESISTANCE
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Tracing the possible evolutionary trends of Morganella morganii: insights from molecular epidemiology and phylogenetic analysis.
Jiawei Chen et al. mSystems 2024 6 e0030624 -
Spread of carbapenemase-producing Morganella spp from 2013 to 2021: a comparative genomic study.
Rémy A Bonnin et al. Lancet Microbe 2024 4 (6) e547-e558 -
Evaluation of Whole Genome Sequencing-Based Predictions of Antimicrobial Resistance to TB First Line Agents: A Lesson from 5 Years of Data.
Meenu Kaushal Sharma et al. Int J Mol Sci 2024 6 (11) -
Near-Universal Resistance to Macrolides of Treponema pallidum in North America.
Nicole A P Lieberman et al. N Engl J Med 2024 6 (22) 2127-2128 -
Emergence of HIV-1 drug resistance mutations among children and adolescents undergoing prolonged antiretroviral therapy in Guangxi.
Xianwu Pang et al. J Glob Antimicrob Resist 2024 4 208-213 -
Varied prevalence of antimalarial drug resistance markers in different populations of newly arrived refugees in Uganda.
Stephen Tukwasibwe et al. J Infect Dis 2024 6
DETECTION / DIAGNOSIS
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Syndromic Gastrointestinal Panel Diagnostic Tests Have Changed our Understanding of the Epidemiology of Yersiniosis-Foodborne Diseases Active Surveillance Network, 2010-2021.
Logan C Ray et al. Open Forum Infect Dis 2024 6 (6) ofae199 -
Real-time PCR assays that detect genes for botulinum neurotoxin A-G subtypes.
Segaran P Pillai et al. Front Microbiol 2024 6 1382056 -
Generation of recombinant viruses directly from clinical specimens of COVID-19 patients.
Hirotaka Yamamoto et al. J Clin Microbiol 2024 6 e0004224 -
Rapid detection of Ebolavirus using isothermal recombinase-aided amplification.
Arianna Ceruti et al. J Med Virol 2024 6 (6) e29744 -
Validation of an automated, end-to-end metagenomic sequencing assay for agnostic detection of respiratory viruses.
Nick P G Gauthier et al. J Infect Dis 2024 5
EPIDEMIOLOGY / OUTBREAKS / TRANSMISSION
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Shiga toxin-producing Escherichia coli O157:H7 outbreak associated with school field trips at a farm animal exhibit-Tennessee, September-October 2023.
Christine M Thomas et al. Zoonoses Public Health 2024 6 -
Multicenter Candida auris outbreak caused by azole-susceptible clade IV in Pernambuco, Brazil.
Bram Spruijtenburg et al. Mycoses 2024 6 (6) e13752
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Disclaimer: Articles listed in the Advanced Molecular Detection Clips are selected by Public Health Genomics Branch to provide current awareness of the scientific literature and news. Inclusion in the clips does not necessarily represent the views of the Centers for Disease Control and Prevention nor does it imply endorsement of the article's methods or findings. CDC and DHHS assume no responsibility for the factual accuracy of the items presented. The selection, omission, or content of items does not imply any endorsement or other position taken by CDC or DHHS. Opinion, findings and conclusions expressed by the original authors of items included in the Clips, or persons quoted therein, are strictly their own and are in no way meant to represent the opinion or views of CDC or DHHS. References to publications, news sources, and non-CDC Websites are provided solely for informational purposes and do not imply endorsement by CDC or DHHS.
- Page last reviewed:Feb 1, 2024
- Page last updated:Sep 5, 2024